Gchil2455.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil2455.t1
Unique NameGchil2455.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length588
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:1173392..1175427 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005702907.1
Preferred namepfk
PFAMsPFK
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017
KEGG koko:K00850,ko:K01412
KEGG ReactionR00756,R03236,R03237,R03238,R03239,R04779
KEGG Pathwayko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230
KEGG ModuleM00001,M00345
GOsGO:0000166,GO:0003674,GO:0003824,GO:0003872,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009536,GO:0009653,GO:0009888,GO:0009987,GO:0010015,GO:0010053,GO:0016020,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0020015,GO:0022622,GO:0030154,GO:0030554,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042579,GO:0042866,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0048364,GO:0048731,GO:0048856,GO:0048869,GO:0051186,GO:0051188,GO:0055086,GO:0061615,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0090558,GO:0090627,GO:0097159,GO:0097367,GO:0099402,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1905392
Evalue7.6e-137
EggNOG OGsCOG0205@1|root,KOG2440@2759|Eukaryota
EC2.7.1.11,3.4.24.64
Description6-phosphofructokinase activity
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko01009,ko03019,ko03029
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2455Gchil2455Gracilaria chilensis NLEC103_M9 malegenetig00004400_pilon 1173392..1175427 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2455.t1Gchil2455.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004400_pilon 1173392..1175427 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2455.t1.stop1Gchil2455.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004400_pilon 1173392..1173394 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2455.t1.CDS1Gchil2455.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004400_pilon 1173392..1173671 -
Gchil2455.t1.CDS2Gchil2455.t1.CDS2Gracilaria chilensis NLEC103_M9 maleCDStig00004400_pilon 1173758..1174040 -
Gchil2455.t1.CDS3Gchil2455.t1.CDS3Gracilaria chilensis NLEC103_M9 maleCDStig00004400_pilon 1174132..1174227 -
Gchil2455.t1.CDS4Gchil2455.t1.CDS4Gracilaria chilensis NLEC103_M9 maleCDStig00004400_pilon 1174323..1175427 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2455.t1.exon1Gchil2455.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004400_pilon 1173392..1173671 -
Gchil2455.t1.exon2Gchil2455.t1.exon2Gracilaria chilensis NLEC103_M9 maleexontig00004400_pilon 1173758..1174040 -
Gchil2455.t1.exon3Gchil2455.t1.exon3Gracilaria chilensis NLEC103_M9 maleexontig00004400_pilon 1174132..1174227 -
Gchil2455.t1.exon4Gchil2455.t1.exon4Gracilaria chilensis NLEC103_M9 maleexontig00004400_pilon 1174323..1175427 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2455.t1.intron1Gchil2455.t1.intron1Gracilaria chilensis NLEC103_M9 maleintrontig00004400_pilon 1173672..1173757 -
Gchil2455.t1.intron2Gchil2455.t1.intron2Gracilaria chilensis NLEC103_M9 maleintrontig00004400_pilon 1174041..1174131 -
Gchil2455.t1.intron3Gchil2455.t1.intron3Gracilaria chilensis NLEC103_M9 maleintrontig00004400_pilon 1174228..1174322 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2455.t1.start1Gchil2455.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004400_pilon 1175425..1175427 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil2455.t1 ID=Gchil2455.t1|Name=Gchil2455.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=588bp
MWGHSGHGCKKSARWTHEGHIQSACVANAVAHLARCLASVGRGDGCEVLL
LSDSLRFAPLSITLTASHCGARRAPRHVPPFPPIAAIDRLVHAAPSGAPG
LIALATVMSAFNVSRPVRIKPNYQTWPYVLRCTAATPKPEAKKLRPPTPP
TVKGGNLPPYNIHIAPHLTDYLEDVPSFKSPLLRTRRHNTFTAPGEIILG
DIALNSEQQPLLLEAFLRAGPRRTVRYPNGVRAAIVSCGGICPGINTVIK
ELTLCLLRYGAAKVFGVRHGYRGFYNSHWLELNVESVQGLNKKGGSVLGS
SRGGFDLERIVDSIETRRIDQVFVIGGDGTIIGCHKIFEEVVSRRLKTSI
VSIPKTIDNDIAVIDRSFGFETAVDEAQRSIDAAYTEATSFPDCIAIVKL
MGRNSGFIACHAALASEVVDCCLIPEEPFTLQGPDGVLAYVEQKLDEKGH
CVLVAAEGAGNMKDKGGDVGLHLLNETQKYFKARNREISTKYLDPTYQIR
AIPTTTHDNILCILLAHAAVHGAYAGYTGFSSGIINNRNVLIPLHMLAGI
QKTVDPEKSDWQRLRMSTGQPEWAVSEDEQTLNGGGV*
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spliced messenger RNA

>Gchil2455.t1 ID=Gchil2455.t1|Name=Gchil2455.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1764bp|location=Sequence derived from alignment at tig00004400_pilon:1173392..1175427- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGGGGCACTCGGGGCACGGCTGCAAAAAATCCGCGCGGTGGACCCA
TGAGGGGCACATTCAGTCAGCTTGCGTCGCAAACGCTGTGGCGCACCTTG
CGCGCTGTTTGGCCTCGGTTGGTCGCGGCGACGGCTGTGAGGTGTTGTTG
CTCTCCGATTCTCTCAGATTTGCTCCACTGTCCATCACCCTTACCGCTTC
GCACTGTGGCGCGCGGCGGGCGCCGCGCCACGTTCCCCCTTTCCCACCCA
TTGCAGCCATCGATCGTCTTGTGCACGCCGCGCCCTCGGGAGCGCCCGGC
CTCATCGCCCTCGCCACCGTCATGAGCGCCTTCAACGTGAGCCGCCCAGT
CCGCATCAAACCCAATTACCAGACATGGCCCTACGTGCTGCGCTGTACCG
CCGCCACTCCCAAGCCGGAAGCTAAAAAGCTCAGACCGCCCACGCCCCCA
ACCGTCAAGGGCGGGAATCTCCCGCCTTATAATATTCACATCGCACCACA
TCTTACCGACTATCTCGAAGACGTTCCCTCCTTTAAATCGCCGCTGCTTC
GCACTCGTCGTCACAACACCTTCACAGCGCCCGGCGAAATCATTCTCGGT
GATATTGCCCTCAATTCCGAACAACAGCCACTGTTGCTAGAGGCCTTTCT
GCGCGCAGGACCGCGTCGAACCGTACGCTACCCAAATGGCGTTCGTGCTG
CCATTGTCTCTTGTGGCGGCATTTGCCCCGGTATCAATACTGTCATAAAG
GAGCTCACTCTCTGTCTTTTGCGTTATGGTGCTGCGAAAGTGTTCGGCGT
TCGACATGGCTATCGCGGCTTTTACAACAGCCATTGGCTGGAGCTTAATG
TGGAAAGCGTGCAGGGACTCAACAAGAAAGGCGGAAGCGTTCTGGGTTCA
AGTCGTGGTGGATTTGATTTGGAGCGCATCGTCGATTCAATTGAGACGCG
CCGTATTGACCAGGTGTTTGTCATTGGCGGTGATGGAACCATCATCGGCT
GCCACAAGATCTTCGAGGAGGTGGTCAGTAGACGACTGAAGACCAGCATT
GTCAGTATTCCAAAGACCATTGATAATGATATTGCCGTCATTGACAGATC
GTTTGGTTTCGAAACTGCTGTAGATGAAGCGCAGCGCTCAATCGATGCGG
CGTACACAGAGGCTACGTCTTTTCCCGATTGCATTGCCATCGTCAAATTG
ATGGGACGGAATTCCGGTTTCATCGCGTGTCACGCAGCTCTTGCTTCAGA
GGTAGTAGACTGCTGCCTCATTCCAGAAGAGCCATTCACACTTCAAGGTC
CCGATGGCGTCCTCGCCTACGTGGAACAGAAGCTTGATGAAAAAGGGCAC
TGTGTCCTTGTGGCGGCCGAGGGGGCTGGAAATATGAAAGACAAGGGTGG
CGATGTCGGCCTTCATCTTCTCAATGAGACGCAGAAATATTTCAAAGCAA
GAAACCGTGAGATCAGTACAAAGTATCTGGACCCGACGTACCAGATTCGA
GCCATTCCCACAACCACTCACGATAATATATTGTGCATCTTGCTGGCTCA
TGCGGCTGTTCATGGGGCTTATGCTGGATATACCGGCTTTTCATCAGGCA
TCATCAACAACCGCAACGTCCTGATACCGCTGCATATGTTAGCTGGTATA
CAAAAGACAGTCGATCCGGAGAAGAGTGATTGGCAGAGGCTTAGGATGTC
CACAGGGCAACCAGAATGGGCAGTCTCCGAAGATGAACAAACTCTGAACG
GAGGTGGTGTCTGA
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protein sequence of Gchil2455.t1

>Gchil2455.t1 ID=Gchil2455.t1|Name=Gchil2455.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=588bp
MWGHSGHGCKKSARWTHEGHIQSACVANAVAHLARCLASVGRGDGCEVLL
LSDSLRFAPLSITLTASHCGARRAPRHVPPFPPIAAIDRLVHAAPSGAPG
LIALATVMSAFNVSRPVRIKPNYQTWPYVLRCTAATPKPEAKKLRPPTPP
TVKGGNLPPYNIHIAPHLTDYLEDVPSFKSPLLRTRRHNTFTAPGEIILG
DIALNSEQQPLLLEAFLRAGPRRTVRYPNGVRAAIVSCGGICPGINTVIK
ELTLCLLRYGAAKVFGVRHGYRGFYNSHWLELNVESVQGLNKKGGSVLGS
SRGGFDLERIVDSIETRRIDQVFVIGGDGTIIGCHKIFEEVVSRRLKTSI
VSIPKTIDNDIAVIDRSFGFETAVDEAQRSIDAAYTEATSFPDCIAIVKL
MGRNSGFIACHAALASEVVDCCLIPEEPFTLQGPDGVLAYVEQKLDEKGH
CVLVAAEGAGNMKDKGGDVGLHLLNETQKYFKARNREISTKYLDPTYQIR
AIPTTTHDNILCILLAHAAVHGAYAGYTGFSSGIINNRNVLIPLHMLAGI
QKTVDPEKSDWQRLRMSTGQPEWAVSEDEQTLNGGGV*
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mRNA from alignment at tig00004400_pilon:1173392..1175427-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil2455.t1 ID=Gchil2455.t1|Name=Gchil2455.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2036bp|location=Sequence derived from alignment at tig00004400_pilon:1173392..1175427- (Gracilaria chilensis NLEC103_M9 male)
ATGTGGGGGCACTCGGGGCACGGCTGCAAAAAATCCGCGCGGTGGACCCA
TGAGGGGCACATTCAGTCAGCTTGCGTCGCAAACGCTGTGGCGCACCTTG
CGCGCTGTTTGGCCTCGGTTGGTCGCGGCGACGGCTGTGAGGTGTTGTTG
CTCTCCGATTCTCTCAGATTTGCTCCACTGTCCATCACCCTTACCGCTTC
GCACTGTGGCGCGCGGCGGGCGCCGCGCCACGTTCCCCCTTTCCCACCCA
TTGCAGCCATCGATCGTCTTGTGCACGCCGCGCCCTCGGGAGCGCCCGGC
CTCATCGCCCTCGCCACCGTCATGAGCGCCTTCAACGTGAGCCGCCCAGT
CCGCATCAAACCCAATTACCAGACATGGCCCTACGTGCTGCGCTGTACCG
CCGCCACTCCCAAGCCGGAAGCTAAAAAGCTCAGACCGCCCACGCCCCCA
ACCGTCAAGGGCGGGAATCTCCCGCCTTATAATATTCACATCGCACCACA
TCTTACCGACTATCTCGAAGACGTTCCCTCCTTTAAATCGCCGCTGCTTC
GCACTCGTCGTCACAACACCTTCACAGCGCCCGGCGAAATCATTCTCGGT
GATATTGCCCTCAATTCCGAACAACAGCCACTGTTGCTAGAGGCCTTTCT
GCGCGCAGGACCGCGTCGAACCGTACGCTACCCAAATGGCGTTCGTGCTG
CCATTGTCTCTTGTGGCGGCATTTGCCCCGGTATCAATACTGTCATAAAG
GAGCTCACTCTCTGTCTTTTGCGTTATGGTGCTGCGAAAGTGTTCGGCGT
TCGACATGGCTATCGCGGCTTTTACAACAGCCATTGGCTGGAGCTTAATG
TGGAAAGCGTGCAGGGACTCAACAAGAAAGGCGGAAGCGTTCTGGGTTCA
AGTCGTGGTGGATTTGATTTGGAGCGCATCGTCGATTCAATTGAGACGCG
CCGTATTGACCAGGTGTTTGTCATTGGCGGTGATGGAACCATCATCGGCT
GCCACAAGATCTTCGAGGAGGTGGTCAGTAGACGACTGAAGACCAGCATT
GTCAGTATTCCAAAGACCATTGATAATGATATTGCCGTCATTGACAGATC
GTTTGGTACGTCAATCTTGCCCCAACATCCGTCATGATCCGATGAAATAG
CTAACCTGCCCTTCGAACATGCCTATCTTTCTTCCATCGCCGTGAAATAG
GTTTCGAAACTGCTGTAGATGAAGCGCAGCGCTCAATCGATGCGGCGTAC
ACAGAGGCTACGTCTTTTCCCGATTGCATTGCCATCGTCAAATTGAGTAA
GTTTTACCGCTGGAGTATCATATACAGTGACCCACTGCGAGTTTTATCAA
CGGCACACACTGACTGACTGACCTCCAACGCGTTTAGTGGGACGGAATTC
CGGTTTCATCGCGTGTCACGCAGCTCTTGCTTCAGAGGTAGTAGACTGCT
GCCTCATTCCAGAAGAGCCATTCACACTTCAAGGTCCCGATGGCGTCCTC
GCCTACGTGGAACAGAAGCTTGATGAAAAAGGGCACTGTGTCCTTGTGGC
GGCCGAGGGGGCTGGAAATATGAAAGACAAGGGTGGCGATGTCGGCCTTC
ATCTTCTCAATGAGACGCAGAAATATTTCAAAGCAAGAAACCGTGAGATC
AGTACAAAGTATCTGGACCCGTATGTGATTACACCATACTGCGCACCACC
ACGCGAGAGCGAAGAGAACATCTAACGTCATGATCTATTCTGTAATGTGA
GCACAGGACGTACCAGATTCGAGCCATTCCCACAACCACTCACGATAATA
TATTGTGCATCTTGCTGGCTCATGCGGCTGTTCATGGGGCTTATGCTGGA
TATACCGGCTTTTCATCAGGCATCATCAACAACCGCAACGTCCTGATACC
GCTGCATATGTTAGCTGGTATACAAAAGACAGTCGATCCGGAGAAGAGTG
ATTGGCAGAGGCTTAGGATGTCCACAGGGCAACCAGAATGGGCAGTCTCC
GAAGATGAACAAACTCTGAACGGAGGTGGTGTCTGA
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Coding sequence (CDS) from alignment at tig00004400_pilon:1173392..1175427-

>Gchil2455.t1 ID=Gchil2455.t1|Name=Gchil2455.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1764bp|location=Sequence derived from alignment at tig00004400_pilon:1173392..1175427- (Gracilaria chilensis NLEC103_M9 male)
ATGTGGGGGCACTCGGGGCACGGCTGCAAAAAATCCGCGCGGTGGACCCA
TGAGGGGCACATTCAGTCAGCTTGCGTCGCAAACGCTGTGGCGCACCTTG
CGCGCTGTTTGGCCTCGGTTGGTCGCGGCGACGGCTGTGAGGTGTTGTTG
CTCTCCGATTCTCTCAGATTTGCTCCACTGTCCATCACCCTTACCGCTTC
GCACTGTGGCGCGCGGCGGGCGCCGCGCCACGTTCCCCCTTTCCCACCCA
TTGCAGCCATCGATCGTCTTGTGCACGCCGCGCCCTCGGGAGCGCCCGGC
CTCATCGCCCTCGCCACCGTCATGAGCGCCTTCAACGTGAGCCGCCCAGT
CCGCATCAAACCCAATTACCAGACATGGCCCTACGTGCTGCGCTGTACCG
CCGCCACTCCCAAGCCGGAAGCTAAAAAGCTCAGACCGCCCACGCCCCCA
ACCGTCAAGGGCGGGAATCTCCCGCCTTATAATATTCACATCGCACCACA
TCTTACCGACTATCTCGAAGACGTTCCCTCCTTTAAATCGCCGCTGCTTC
GCACTCGTCGTCACAACACCTTCACAGCGCCCGGCGAAATCATTCTCGGT
GATATTGCCCTCAATTCCGAACAACAGCCACTGTTGCTAGAGGCCTTTCT
GCGCGCAGGACCGCGTCGAACCGTACGCTACCCAAATGGCGTTCGTGCTG
CCATTGTCTCTTGTGGCGGCATTTGCCCCGGTATCAATACTGTCATAAAG
GAGCTCACTCTCTGTCTTTTGCGTTATGGTGCTGCGAAAGTGTTCGGCGT
TCGACATGGCTATCGCGGCTTTTACAACAGCCATTGGCTGGAGCTTAATG
TGGAAAGCGTGCAGGGACTCAACAAGAAAGGCGGAAGCGTTCTGGGTTCA
AGTCGTGGTGGATTTGATTTGGAGCGCATCGTCGATTCAATTGAGACGCG
CCGTATTGACCAGGTGTTTGTCATTGGCGGTGATGGAACCATCATCGGCT
GCCACAAGATCTTCGAGGAGGTGGTCAGTAGACGACTGAAGACCAGCATT
GTCAGTATTCCAAAGACCATTGATAATGATATTGCCGTCATTGACAGATC
GTTTGGTTTCGAAACTGCTGTAGATGAAGCGCAGCGCTCAATCGATGCGG
CGTACACAGAGGCTACGTCTTTTCCCGATTGCATTGCCATCGTCAAATTG
ATGGGACGGAATTCCGGTTTCATCGCGTGTCACGCAGCTCTTGCTTCAGA
GGTAGTAGACTGCTGCCTCATTCCAGAAGAGCCATTCACACTTCAAGGTC
CCGATGGCGTCCTCGCCTACGTGGAACAGAAGCTTGATGAAAAAGGGCAC
TGTGTCCTTGTGGCGGCCGAGGGGGCTGGAAATATGAAAGACAAGGGTGG
CGATGTCGGCCTTCATCTTCTCAATGAGACGCAGAAATATTTCAAAGCAA
GAAACCGTGAGATCAGTACAAAGTATCTGGACCCGACGTACCAGATTCGA
GCCATTCCCACAACCACTCACGATAATATATTGTGCATCTTGCTGGCTCA
TGCGGCTGTTCATGGGGCTTATGCTGGATATACCGGCTTTTCATCAGGCA
TCATCAACAACCGCAACGTCCTGATACCGCTGCATATGTTAGCTGGTATA
CAAAAGACAGTCGATCCGGAGAAGAGTGATTGGCAGAGGCTTAGGATGTC
CACAGGGCAACCAGAATGGGCAGTCTCCGAAGATGAACAAACTCTGAACG
GAGGTGGTGTCTGA
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