Gchil2464.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil2464.t1 vs. uniprot
Match: A0A2V3J0Q8_9FLOR (U2 small nuclear ribonucleoprotein B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Q8_9FLOR) HSP 1 Score: 300 bits (769), Expect = 3.620e-100 Identity = 169/256 (66.02%), Postives = 189/256 (73.83%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKIRLRRLLHAAFTPYGQIVHIIAEKSLPLRGQAFITFHNQTSATAALRKLNETEFMGKQISVSYARSLSDKAGSQKLGGDSKQSRKRRAAXXXXDQQAAKR---------------ARTEAEPSVAAP-LPPVQPQAVPREPPPMLSPAVPNRILFVQNLPRALERGGKPAPLVDVLSDLFARFVGFVEVRSVPGNDTIAFVEFGNEAEAAVALSGLRQHPLGTPPQPMKLSFANK 240
MDAPAPCRTLYVRNLPDKLKK RLRRLLHAA +PYG++VHI+AEKS+PLRGQAFITFH Q SATAALRKL+ +EFMG ISVSYAR+LSDKA S+KLGGDS SR +RAA D A KR A T S A P PP+ VP P+ +PAVPNRILFVQN+P AL++ K + DVLSDLFARF GFVEVRSVPG TIAFVEF +E EAAVALSGL HPLG PPQP+ +SFANK
Sbjct: 1 MDAPAPCRTLYVRNLPDKLKKHRLRRLLHAACSPYGRVVHIVAEKSIPLRGQAFITFHTQASATAALRKLHASEFMGNHISVSYARALSDKAASEKLGGDSTLSRNKRAAKRRADALAVKRDHIAAAEQQQQQHALASTAVPSSTAMPNAPPIVAAIVPH---PIAAPAVPNRILFVQNIPTALDKHAKKELVSDVLSDLFARFAGFVEVRSVPGKHTIAFVEFSSEQEAAVALSGLNAHPLGDPPQPIHVSFANK 253
BLAST of Gchil2464.t1 vs. uniprot
Match: R7QCR0_CHOCR (\Probable U2 small nuclear ribonucleoprotein B (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCR0_CHOCR) HSP 1 Score: 150 bits (378), Expect = 6.100e-43 Identity = 75/106 (70.75%), Postives = 89/106 (83.96%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKIRLRRLLHAAFTPYGQIVHIIAEKSLPLRGQAFITFHNQTSATAALRKLNETEFMGKQISVSYARSLSDKAGSQKLGGDSKQSRK 106
MDA PCRTLYVRNLPDKL K +LRRLLHAAFTP+G +V I+AEK+L LRGQAFITF Q+SAT ALRK + TEF+G+ +SV+YAR++SD+A S KLGGDS SRK
Sbjct: 1 MDANPPCRTLYVRNLPDKLAKAKLRRLLHAAFTPHGHVVWIVAEKTLKLRGQAFITFEQQSSATQALRKTHATEFLGRVLSVTYARAVSDRAASAKLGGDSALSRK 106
BLAST of Gchil2464.t1 vs. uniprot
Match: A0A7S0HCA2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HCA2_9EUKA) HSP 1 Score: 131 bits (329), Expect = 1.440e-33 Identity = 97/251 (38.65%), Postives = 143/251 (56.97%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKIRLRRLLHAAFTPYGQIVHIIAEKSLPLRGQAFITFHNQTSATAALRKLNETEFMGKQISVSYARSLSDKA----GSQKLGGDSKQSRKRRAAXXXXDQQ---AAKRARTEAEPSVAAPLPPVQPQAVPRE----PPPMLSPAVPNRILFVQNLPRALERGGKPAPLVDVLSDLFARFVGFVEVRSVPGNDTIAFVEFGNEAEAAVALSGLRQHPLGTPPQPMKLSFANK 240
M PAP T+YV N+ +K+ K L++ L+AAF+ +G I+ +IA K+ +RGQAF+ F + T+AT A+R++ F K + +SYA S SD GS + ++++ KR+A XXXX A + + AE VA P A P E PP + A+PN+ILFV+NLP + +LS LF +F GF EVR VPG IAFVEF N+ ++ A+ GL+ + TP MK+++A +
Sbjct: 30 MAEPAPRETIYVNNINEKVSKDELKKSLYAAFSQFGPILDVIALKTFKMRGQAFVVFRDITAATQAVRQMQGFPFYEKPMMISYANSKSDAVAKLDGSYEAKDKAERASKRKAXXXXXXXXXXXALAKPKEVAEAGVATPAVGEAVAAAPVERKKAPPSAPTVALPNQILFVENLPDQVNE--------MMLSMLFQQFPGFKEVRLVPGKAGIAFVEFENDVQSGTAMQGLQNFKI-TPTNLMKITYAKR 271
BLAST of Gchil2464.t1 vs. uniprot
Match: UPI000719A4EB (U1 small nuclear ribonucleoprotein A-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719A4EB) HSP 1 Score: 129 bits (325), Expect = 3.630e-33 Identity = 98/259 (37.84%), Postives = 139/259 (53.67%), Query Frame = 0
Query: 6 PCRTLYVRNLPDKLKKIRLRRLLHAAFTPYGQIVHIIAEKSLPLRGQAFITFHNQTSATAALRKLNETEFMGKQISVSYARSLSDKAGSQK-------------LGGDSKQSRKRRA---AXXXXDQQAAKRARTEAEPSVAAPLPPVQPQAVPREPP----PMLSPAVP----NRILFVQNLPRALERGGKPAPLVDVLSDLFARFVGFVEVRSVPGNDTIAFVEFGNEAEAAVALSGLRQHPLGTPPQPMKLSFANK 240
P T+Y+ NL +K+KK L++ L+A F+ +GQI+ I+A K+L +RGQAF+ F + T ALR + F K + ++Y++ SD QK G DS+ SRK R A DQQ A +A+ P A+ +P +QP VP+ P P ++ A+P N+ILF+ NLP +LS LF +F GF EVR VPG IAFVEF NE ++A A L+ + TP MK++FA K
Sbjct: 5 PNNTIYINNLNEKIKKDELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKDINGGTNALRSMQGFPFYDKPMRIAYSKIDSDIIAKQKGTFVERPKKPKRVPGEDSQMSRKERKRAQAKKIEDQQQAVQAQRPQLPP-ASMMPGLQPSFVPQPPTMPGQPQVAAAIPEQPPNQILFLTNLPEETNE--------MMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENELQSAAAKDALQSFKI-TPTHAMKITFAKK 253
BLAST of Gchil2464.t1 vs. uniprot
Match: D0N2K1_PHYIT (U1 small nuclear ribonucleoprotein A n=10 Tax=Phytophthora TaxID=4783 RepID=D0N2K1_PHYIT) HSP 1 Score: 125 bits (315), Expect = 6.700e-32 Identity = 87/239 (36.40%), Postives = 136/239 (56.90%), Query Frame = 0
Query: 2 DAPAPCRTLYVRNLPDKLKKIRLRRLLHAAFTPYGQIVHIIAEKSLPLRGQAFITFHNQTSATAALRKLNETEFMGKQISVSYARSLSDKAGSQKLGGDSKQSRKRRAAXXXXDQQAAKRARTEAEPSVAAPLPPVQPQAVPREPPPMLSPAVPNRILFVQNLPRALERGGKPAPLVDVLSDLFARFVGFVEVRSVPGNDTIAFVEFGNEAEAAVALSGLRQHPLGTPPQPMKLSFANK 240
D P P TLY+ NL DK+K R++ L+A + YG+I+ I+ ++ LRGQA++TF + SA++ALR +N T K + + +A+ +D ++ ++ RKR +QQ K+ +A + +A A PR P + +PN+ILF++ LP + + ++L LF ++ GF EVR VPG +AFVEFG+EA+AA+AL GL L TP + +K+SFA K
Sbjct: 15 DVP-PNHTLYLNNLNDKIKADRMKATLYATLSQYGKILEIVMGRARRLRGQAWVTFDDVPSASSALRTVNGTTLFDKPVVIHFAKEKADVIARREGSFVPREKRKR---DPKPEQQTTKK---QASANGSAAATGSSTAAQPRMP----AQNLPNKILFLEELPESCNK--------EMLGVLFKQYQGFKEVRMVPGKKGLAFVEFGDEAQAAIALQGLFGFKL-TPTEALKVSFAKK 233
BLAST of Gchil2464.t1 vs. uniprot
Match: A0A5B8MSV7_9CHLO (U1 small nuclear ribonucleoprotein A n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MSV7_9CHLO) HSP 1 Score: 125 bits (314), Expect = 8.960e-32 Identity = 90/253 (35.57%), Postives = 137/253 (54.15%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKIRLRRLLHAAFTPYGQIVHIIAEKSLPLRGQAFITFHNQTSATAALRKLNETEFMGKQISVSYARSLSD-------------KAGSQKLGGDSKQSRKRRAAXXXXDQQAAKRARTEAEPSVAAPLPPVQPQAVPREPPPMLSPAVPNRILFVQNLPRALERGGKPAPLVDVLSDLFARFVGFVEVRSVPGNDTIAFVEFGNEAEAAVALSGLRQHPLGTPPQPMKLSFANK 240
+D P +T+YV NL +KL K LR+ LHA F+ +G+I+ I+ K+ LRGQA++ F + TSAT ALR + F K + ++YA++ SD KA + ++ + +++ ++RAA + ++A A ++A L +P P+ ILFVQNLP PA +++ LF +F GF EVR V IAFVEFGNE E++VALSGL+ + T M++S+A K
Sbjct: 3 IDGSLPNQTVYVSNLYEKLSKDELRKSLHAVFSQFGKILDIVCMKNYRLRGQAWVVFEDITSATNALRLMQGFPFYDKPMKIAYAKTKSDAVAKLDGTYVSRDKAETARVNKEKREALQKRAAMRKGGSRPDQQAPFAAGAALAGTLDSEEP---------------PHNILFVQNLP--------PATSQAMIAMLFEQFPGFKEVRMVETRPGIAFVEFGNEMESSVALSGLQGFQI-TKENSMRVSYAKK 231
BLAST of Gchil2464.t1 vs. uniprot
Match: D3BQD0_POLPP (U2 small nuclear ribonucleoprotein B n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BQD0_POLPP) HSP 1 Score: 125 bits (315), Expect = 9.290e-32 Identity = 90/233 (38.63%), Postives = 135/233 (57.94%), Query Frame = 0
Query: 9 TLYVRNLPDKLKKIRLRRLLHAAFTPYGQIVHIIAEKSLPLRGQAFITFHNQTSATAALRKLNETEFMGKQISVSYARSLSDKAGSQKLGG---DSKQSRKRRAAXXXXDQQAAKRARTEAEPSVAAPLPPVQPQAVPREPPPMLSPAVPNRILFVQNLPRALERGGKPAPLVDVLSDLFARFVGFVEVRSVPGNDTIAFVEFGNEAEAAVALSGLRQHPLGTPPQPMKLSFA 238
T+YV NL +K K +L L++ F+PYG I+ I+A K +RGQAFI F + TSA+ ALR++N EF+G+ +S+ YA+S SD KL G + K+ R+ XXX + K+ T A+P A+ QA P +P A PN+ILFV+NLP E +L+ LF++F GF + +AFVEF +++++AVA++ L+ + TP +PM +SFA
Sbjct: 30 TIYVNNLNEKPSKKKLTEQLYSLFSPYGSILEIVAAKRQKMRGQAFIVFKDITSASNALREMNGFEFLGRPMSIQYAKSKSDAVS--KLDGTYIEKKRERENDQDKXXXXKXQTKKPSTTAKPKAAST---ANAQAAPLQP----REAPPNKILFVENLPEQCEE--------MMLNMLFSQFPGFQGISMTTAKKGVAFVEFDDDSKSAVAMTHLQGFKV-TPEKPMVISFA 244
BLAST of Gchil2464.t1 vs. uniprot
Match: H3AFC4_LATCH (Uncharacterized protein n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AFC4_LATCH) HSP 1 Score: 125 bits (313), Expect = 1.200e-31 Identity = 88/236 (37.29%), Postives = 126/236 (53.39%), Query Frame = 0
Query: 6 PCRTLYVRNLPDKLKKIRLRRLLHAAFTPYGQIVHIIAEKSLPLRGQAFITFHNQTSATAALRKLNETEFMGKQISVSYARSLSDKAGSQKLGGDSKQSRKRRAAXXXXDQQAAKRARTEAEPSVAAPLPPVQPQA-VPREPPPMLSPAVPNRILFVQNLPRALERGGKPAPLVDVLSDLFARFVGFVEVRSVPGNDTIAFVEFGNEAEAAVALSGLRQHPLGTPPQPMKLSFANK 240
P T+Y+ N+ D +KK L+R L+A FT +GQI+ I+A K++ +RGQAF+ F +SAT ALR+L F GK + + YA++ SD + K+ RK + +Q A + + + A PV Q+ V + +P PN ILF+ NLP +LS LF +F GF EVR VPG IAFVEF NE +A A L+ + TP MK+++A K
Sbjct: 5 PNHTIYINNINDSVKKEELKRSLYALFTQFGQILDIVALKTMKMRGQAFVVFKELSSATNALRQLQGFPFYGKPMRIQYAKTDSDLVAKMRGTFGDKERRKEKKKAKAQEQSANAANKKPGQVNQGAAQAPVNAQSNVAQNQQAQDNP--PNYILFLNNLPEETNE--------MMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENEGQAGAARDALQGFRI-TPSHAMKITYAKK 229
BLAST of Gchil2464.t1 vs. uniprot
Match: A0A662Y965_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y965_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.430e-31 Identity = 89/241 (36.93%), Postives = 137/241 (56.85%), Query Frame = 0
Query: 2 DAPAPCRTLYVRNLPDKLKKIRLRRLLHAAFTPYGQIVHIIAEKSLPLRGQAFITFHNQTSATAALRKLNETEFMGKQISVSYARSLSDKAGSQKLGGDSKQSRKR--RAAXXXXDQQAAKRARTEAEPSVAAPLPPVQPQAVPREPPPMLSPAVPNRILFVQNLPRALERGGKPAPLVDVLSDLFARFVGFVEVRSVPGNDTIAFVEFGNEAEAAVALSGLRQHPLGTPPQPMKLSFANK 240
D P P TLY+ NL DK+K+ R++ L++ F+ +G+I+ I+ ++ LRGQA++TF + SA+ ALR +N + K V +A+ +D ++ ++ RKR + A Q + + S AAP P A+P PP + VP++ILF+Q LP + + ++LS LF ++ GF EVR VPG +AFVEFG+EA+A++AL GL L TP +K+SFA K
Sbjct: 13 DVP-PNHTLYLNNLNDKIKQDRMKAALYSGFSQHGKILEIVMGRARRLRGQAWLTFDDIASASNALRAMNGSVLFDKPAVVRFAKDKADVIARREGTFVPREKRKREPKPAADKATQLPGAKKQVGENGSAAAP----SPVALPPPPP---AQNVPHKILFLQELPESCNK--------EMLSVLFKQYHGFKEVRMVPGKKGLAFVEFGDEAQASIALQGLFGFKL-TPTDALKVSFAKK 236
BLAST of Gchil2464.t1 vs. uniprot
Match: A0A1Y1IC41_KLENI (Putative RNA recognition motif containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IC41_KLENI) HSP 1 Score: 124 bits (312), Expect = 2.780e-31 Identity = 91/256 (35.55%), Postives = 138/256 (53.91%), Query Frame = 0
Query: 5 APCRTLYVRNLPDKLKKIRLRRLLHAAFTPYGQIVHIIAEKSLPLRGQAFITFHNQTSATAALRKLNETEFMGKQISVSYARSLSDKAGSQKLGGDSKQSRKRRAAXXXXDQQAAKRARTEAEPSVAAPLPPV-----------------QPQAVPREPPPML---SPAVPNRILFVQNLPRALERGGKPAPLVDVLSDLFARFVGFVEVRSVPGNDTIAFVEFGNEAEAAVALSGLRQHPLGTPPQPMKLSFANK 240
AP +T+YV NL +K+KK +++ L+A F+ +G+I+ I+ K+L LRGQA++ F + T+AT ALR++ F K + ++YA++ SD K G KR+A ++A KRA + A P+P P PPPM +PA PN +LFV+NLP + +LS LF +F GF EVR + IAFVEF +E ++ VA+SGL+ + + TP PM +++A K
Sbjct: 11 APNQTIYVSNLNEKIKKEEMKKSLYAVFSQFGKILDIVNLKTLKLRGQAWVVFDDITAATNALRQMQGFPFYDKPMKIAYAKTKSDAVS--KADGTFVPREKRKAIEEREKEKARKRA------AAAGPVPAALXXXXXXXXXXXXXXXXXPAYGYGMPPPMAVPEAPAPPNNLLFVENLPLEASK--------LMLSTLFNQFPGFKEVRMIESKPGIAFVEFSDENQSTVAMSGLQGYRI-TPTNPMLITYAKK 249 The following BLAST results are available for this feature:
BLAST of Gchil2464.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil2464.t1 ID=Gchil2464.t1|Name=Gchil2464.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=241bpback to top |