Gchil9998.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9998.t1
Unique NameGchil9998.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length97
Homology
[Close]
BLAST of Gchil9998.t1 vs. uniprot
Match: A0A2V3IHQ9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHQ9_9FLOR)

HSP 1 Score: 135 bits (341), Expect = 1.060e-39
Identity = 66/97 (68.04%), Postives = 78/97 (80.41%), Query Frame = 0 
Query:    1 MDMNFSAPIHQDPLLIIHIVDEAWTTESLPTEDIDLPPAVIPTIEEDEHAVVEEQENEEDKWNDLGLDEFSSLATETNRPNGST-APSTSTPASSHR 96
            MDMNFSAPIHQDPLLIIHIV E W TE+LPT+D+D+ P+V P ++EDEH   +EQENEEDKWNDLGLD  + LA ET R NGS+ AP  STP+ +HR
Sbjct:    1 MDMNFSAPIHQDPLLIIHIVSEEWATETLPTDDVDVHPSVFPGVDEDEHGPTDEQENEEDKWNDLGLDSLAKLAAETGRANGSSSAPPPSTPSPAHR 97
[Close]
BLAST of Gchil9998.t1 vs. uniprot
Match: UPI001035E2F8 (anaphase-promoting complex subunit 13-like n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI001035E2F8)

HSP 1 Score: 50.4 bits (119), Expect = 2.440e-6
Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 0 
Query:   15 LIIHIVDEAWTTESLPTEDIDLPPAVIPTIEEDEHAVVEEQENEEDKWNDLGL 67
            ++I IVDE W  ++LP +D+ LPP +I   ++ E ++ E Q+ E D W+DL L
Sbjct:    8 VLIDIVDEEWMRDTLPNDDLPLPPVMISRTDDTEDSIQENQQVEGDTWHDLAL 60
The following BLAST results are available for this feature:
BLAST of Gchil9998.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IHQ9_9FLOR1.060e-3968.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
UPI001035E2F82.440e-641.51anaphase-promoting complex subunit 13-like n=2 Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008401Apc13PFAMPF05839Apc13pcoord: 16..72
e-value: 4.0E-6
score: 26.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:215858..216148 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9998.t1Gchil9998.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004442_pilon 215858..216148 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9998.t1 ID=Gchil9998.t1|Name=Gchil9998.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=97bp
MDMNFSAPIHQDPLLIIHIVDEAWTTESLPTEDIDLPPAVIPTIEEDEHA
VVEEQENEEDKWNDLGLDEFSSLATETNRPNGSTAPSTSTPASSHR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008401Apc13