Gchil9995.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9995.t1
Unique NameGchil9995.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length281
Homology
BLAST of Gchil9995.t1 vs. uniprot
Match: A0A2V3IHS8_9FLOR (R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHS8_9FLOR)

HSP 1 Score: 356 bits (913), Expect = 4.940e-121
Identity = 181/280 (64.64%), Postives = 215/280 (76.79%), Query Frame = 0
Query:    1 MIAFAPSTALTSARVATSGSSFTTNVPCVSPSRRPHNAPTMALRRSLVKPTGTTGTSYGGAATILNMADGYMAKSVLNQYLNISQPTGVYGVQCAEGSVQGAADATRVRALSNRFRAKQASPAKKYGDLYENRKNAVLADHICQYEESLFTKYPKLSSTYNLARSEAYGTCIRYATPESVQEAAMMRYMDIQQNIAANPTGVYNSSCNEGTVRGQAEQLRVAALNVAYRNAQKPIGQIMNERYQQKKYGYNMCHGCTYEESLVSKYPAIGAAFRQKSYGY 280
            M AFAPS ++T+AR     +SFTT++   +P R   NA T    RS          +   A+ IL  A  YMA SVL QY NI+ PTG YGVQC EGSV+GAA+A RVRALS  FRA+Q  P KKY DLYENRKNA+ ADHICQYEE+LF++YP +++TYN+AR+EA G C RYATPESV+EAAM+RYMDIQQN AANP+GVYNSSCNEG  +GQ+E LR+AALNVAYRNAQKP+ QI+ E+Y+QKKYGY  CHGC YEESLVSK+PAIGAAFR K+YGY
Sbjct:    1 MFAFAPSVSVTAARTTLPSTSFTTSL---TPHRPNRNATTSMALRSPSSVRSVRSVAAARASDILAKAADYMANSVLYQYYNIANPTGEYGVQCTEGSVKGAAEAARVRALSTAFRARQVGPFKKYFDLYENRKNAIAADHICQYEETLFSRYPSVAATYNVARNEANGACSRYATPESVEEAAMLRYMDIQQNNAANPSGVYNSSCNEGAAKGQSEHLRIAALNVAYRNAQKPLAQILQEKYEQKKYGYVQCHGCNYEESLVSKFPAIGAAFRAKTYGY 277          
BLAST of Gchil9995.t1 vs. uniprot
Match: A0A291FEC5_GRIPA (LR gamma5 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEC5_GRIPA)

HSP 1 Score: 301 bits (772), Expect = 1.680e-99
Identity = 161/286 (56.29%), Postives = 202/286 (70.63%), Query Frame = 0
Query:    1 MIAFAPSTALTSARVATSGSSFTTNVPCVSPSRRPHNAPTMALRRSLVKPTGT-TGTSYG-----GAATILNMADGYMAKSVLNQYLNISQPTGVYGVQCAEGSVQGAADATRVRALSNRFRAKQASPAKKYGDLYENRKNAVLADHICQYEESLFTKYPKLSSTYNLARSEAYGTCIRYATPESVQEAAMMRYMDIQQNIAANPTGVYNSSCNEGTVRGQAEQLRVAALNVAYRNAQKPIGQIMNERYQQKKYGYNMCHGCTYEESLVSKYPAIGAAFRQKSYGY 280
            M AFAP+T  T+++     +SFT+ +P  S SR P  APTM LR  L  P  +   T YG       + IL  AD YMAKSV  QYL  S P G +GVQC EGSV+ AAD +R+RAL+  FRAK  S +KK  D+YENRKNA+   H C +EE+ F  Y  +SS YN+++SEA G+C RYA+PE+V EAAM+R+MDIQ  +AANPTGVYN SCNEG  RGQAE +RVAALN A+R  QK +G++++E+YQQKK GY+  HGC YEE L++KYPA+GAAFR KSYGY
Sbjct:    1 MYAFAPNTPFTASKAVVGKTSFTSPLPAQSESR-PTAAPTMVLRTVLRSPVPSGAATVYGYVGRGNISVILAKADEYMAKSVRKQYLAKSNPYGTFGVQCTEGSVKFAADFSRIRALNAEFRAKLGSASKKTFDMYENRKNAISNSHGCHHEETQFVGYKGVSSMYNVSKSEASGSCSRYASPETVVEAAMLRFMDIQVKMAANPTGVYNISCNEGAARGQAEDVRVAALNAAFRQGQKSLGKLLDEKYQQKKQGYSFAHGCNYEEGLINKYPALGAAFRSKSYGY 285          
BLAST of Gchil9995.t1 vs. uniprot
Match: R7QDA3_CHOCR (Gamma 31 kDa subunit of phycoerythrin n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDA3_CHOCR)

HSP 1 Score: 298 bits (763), Expect = 3.780e-98
Identity = 150/286 (52.45%), Postives = 207/286 (72.38%), Query Frame = 0
Query:    1 MIAFAPSTALTSARVATSGSSFTTNVPCVSPSRRPHNAPTMALRRSLVKPTGTTG------TSYGGAATILNMADGYMAKSVLNQYLNISQPTGVYGVQCAEGSVQGAADATRVRALSNRFRAKQASPAKKYGDLYENRKNAVLADHICQYEESLFTKYPKLSSTYNLARSEAYGTCIRYATPESVQEAAMMRYMDIQQNIAANPTGVYNSSCNEGTVRGQAEQLRVAALNVAYRNAQKPIGQIMNERYQQKKYGYNMCHGCTYEESLVSKYPAIGAAFRQKSYGY 280
            M+AFAP+++  +A+ + + +SFT + P        H APTM LR SL KP G++       + +GGAA IL+ AD YMA+S+L QY  ++ P GVYGVQC EG  +  AD +R+RAL+ RFRA+QAS A+ Y  L+ENRK A+++ H C +EE+ F++Y  ++++YN++R+EA G+C RYATPE+V+EAA++R+MDIQQ  AANP+GVYN +CNEG  + QAE  RVAALN AYRN QK  G+++ E+Y Q+K GY   HGC YEE LV+ YPA+GA FR K+YGY
Sbjct:    1 MLAFAPTSSFATAKPSLA-TSFT-SAPVCHRRAATHTAPTMILRTSLRKPVGSSSAFVGMASGFGGAAAILSKADTYMAQSILMQYYKVANPAGVYGVQCTEGGSKHMADFSRIRALNARFRARQASKAQAYARLFENRKMAIVSSHECHHEETQFSQYANVAASYNVSRAEALGSCSRYATPETVEEAALLRFMDIQQTTAANPSGVYNVACNEGAAKFQAEDCRVAALNAAYRNGQKSAGKLLQEKYDQRKKGYAATHGCNYEEGLVNNYPALGATFRPKTYGY 284          
BLAST of Gchil9995.t1 vs. uniprot
Match: A0A5J4YZM7_PORPP (R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZM7_PORPP)

HSP 1 Score: 197 bits (502), Expect = 7.530e-59
Identity = 105/216 (48.61%), Postives = 132/216 (61.11%), Query Frame = 0
Query:   66 NMADGYMAKSVLNQYLNISQPTGVYGVQCAEGSVQGAADATRVRALSNRFRAKQASPAKKYGDLYENRKNAVLADHICQYEESLFTKYPKLSSTYNLARSEAYGTCIRYATPESVQEAAMMRYMDIQQNIAANPTGVYNSSCNEGTVRGQAEQLRVAALNVAYRNAQKPIGQIMNERYQQKKYG-YNMCHGCTYEESLVSKYPAIGAAFRQKSYGY 280
            N  D YMA+SV  QY   +  TGVYG QC EG+V+GAA+A+R  ALS +FR KQ S   K  DL+E RK+A++A   C YEE + T++PKL++   L ++E   TC RY  PESV+E  M   +D Q      P GVY+ SC EG  +GQAE  RV+AL  AYR A K    +  ERY    YG  +  HGC+YEE   +KYPA  AA R  SYGY
Sbjct:   58 NKVDEYMARSVQRQYKQAAVATGVYGTQCTEGTVKGAAEASRSAALSRQFRIKQRSAFSKAHDLFEFRKHAIIAAAGCSYEEKMVTRFPKLAAAMVLGQTEMMRTCSRYVVPESVEEEYMAASVDKQMKRRGAPGGVYSLSCAEGVAKGQAEIARVSALGAAYRAASKSASAVTAERYNSMAYGRVHFAHGCSYEEQQFNKYPAAAAAMRSDSYGY 273          
BLAST of Gchil9995.t1 vs. uniprot
Match: Q7XYZ7_GRIJA (Phycoerythrin 31 kDa gamma subunit (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYZ7_GRIJA)

HSP 1 Score: 189 bits (481), Expect = 1.600e-56
Identity = 107/211 (50.71%), Postives = 143/211 (67.77%), Query Frame = 0
Query:   10 LTSARVATSGSSFTTNVPCVSPSRRPHNAPTMALRRSLVKPTGT-TGTSYG-----GAATILNMADGYMAKSVLNQYLNISQPTGVYGVQCAEGSVQGAADATRVRALSNRFRAKQASPAKKYGDLYENRKNAVLADHICQYEESLFTKYPKLSSTYNLARSEAYGTCIRYATPESVQEAAMMRYMDIQQNIAANPTGVYNSSCNEGTVRG 214
            LT A+ A   S+FT+ +P  + S  P  APTM LR +L  P  + + T +G       A+IL+ AD YMA SV  QYL  S P GV+ VQC EGSV+ AAD +RVRAL+  +R +  S +KK  D++E+RK+A+   H C +EE+ F  Y K++S YN+++SEA G+C RYA+PE+V EAAM+R+MDIQ   AANPTGVY+SSCNEG  RG
Sbjct:    1 LTVAKPAVGSSAFTSPLPAHTESA-PSAAPTMVLRTTLRSPMSSGSATVFGYVGKANIASILSKADAYMAMSVRKQYLAKSNPFGVFNVQCTEGSVKFAADFSRVRALNLNYRTQAYSASKKTMDMFESRKSAIANSHGCHHEETQFVAYKKMTSMYNVSKSEALGSCSRYASPETVTEAAMLRFMDIQMKQAANPTGVYSSSCNEGAARG 210          
BLAST of Gchil9995.t1 vs. uniprot
Match: A0A1X6NK78_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NK78_PORUM)

HSP 1 Score: 177 bits (450), Expect = 7.740e-51
Identity = 101/231 (43.72%), Postives = 124/231 (53.68%), Query Frame = 0
Query:   51 TGTTGTSYGGAATILNMADGYMAKSVLNQYLNISQPTGVYGVQCAEGSVQGAADATRVRALSNRFRAKQASPAKKYGDLYENRKNAVLADHICQYEESLFTKYPKLSSTYNLARSEAYGTCIRYATPESVQEAAMMRYMDIQQNIAANPTGVYNSSCNEGTVRGQAEQLRVAALNVAYRNAQKPIGQIMNERYQQKKYG-YNMCHGCTYEESLVSKYPAIGAAFRQKSYGY 280
            T   G    GAA     AD YMA SV  QY   + P+GVY   C EG+VQGAAD  R+ ALS RFRA   S A KYGD +E R+ A+ A H C YEE L   YP++++   L  +EA   C+RYA P S  EA M   +D Q    A   G Y  SC +G+V G+AE  RVAAL   YR    P G      Y   KY   +  HGC+YEE++   YPA+ A  R  +  Y
Sbjct:   65 TDVVGGGVTGAA-----ADVYMAASVRAQYKATAVPSGVYSTACTEGTVQGAADGARIAALSARFRAGHRSTAAKYGDFFEARRQAITASHGCSYEERLVGTYPRVAAAMTLGAAEASRACVRYAAPASPAEAYMAASVDRQMKARAAAGGTYAPSCTDGSVGGEAEAARVAALATRYRTGAAPAGARAAAAYAASKYARVHFGHGCSYEEAVFDAYPAVAAGMRPSTARY 290          
BLAST of Gchil9995.t1 vs. uniprot
Match: A0A1X6PF00_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PF00_PORUM)

HSP 1 Score: 157 bits (398), Expect = 1.890e-42
Identity = 95/242 (39.26%), Postives = 124/242 (51.24%), Query Frame = 0
Query:   40 TMALRRSLVKPTGTTGTSYGGAATILNMADGYMAKSVLNQYLNISQPTGVYGVQCAEGSVQGAADATRVRALSNRFRAKQASPAKKYGDLYENRKNAVLADHICQYEESLFTKYPKLSSTYNLARSEAYGTCIRYATPESVQEAAMMRYMDIQQNIAANPTGVYNSSCNEGTVRGQAEQLRVAALNVAYRNAQKPIGQIMNERYQQKKYGYN-MCHGCTYEESLVSKYPAIGAAFRQKSYGY 280
            T  +  + V  TG       GA      AD YMA+ V + Y   + P GVY   C EGS +G ADA+R+ ALS+RFRA   S A K GD +E R+ A      C YEESL  ++P  ++   L  +E   TCIRY  P S  E+ M+R +D Q    A   GVY  SC++G   G+AE  RV AL  A+     P G     R+    Y  N   HGC YEE+L +K+ A+ AA R  +  Y
Sbjct:  113 TRTMAPAAVPATGVAPRGLAGAR-----ADVYMAERVRSAYKQQANPMGVYQPACTEGSAKGHADASRIAALSSRFRAGHRSTAAKLGDYFETRRRATTVAAGCTYEESLIGRFPAAAAATVLGAAEVGRTCIRYGVPRSAAESFMVRAVDAQMKARAVVGGVYAPSCSDGGAAGEAETARVTALAAAFXXXXAPAGVDAAARFDSAAYARNHFGHGCDYEEALFNKWGAVAAAMRPSTARY 349          
BLAST of Gchil9995.t1 vs. uniprot
Match: A0A1X6PK41_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PK41_PORUM)

HSP 1 Score: 157 bits (398), Expect = 2.540e-42
Identity = 88/209 (42.11%), Postives = 121/209 (57.89%), Query Frame = 0
Query:   68 ADGYMAKSVLNQYLNISQPTGVYGVQCAEGSVQGAADATRVRALSNRFRAKQASPAKKYGDLYENRKNAVLADHICQYEESLFTKYPKLSSTYNLARSEAYGTCIRYATPESVQEAAMMRYMDIQQNIAANPTGVYNSSCNEGTVRGQAEQLRVAALNVAYRNA-QKPIGQIMNERYQQKKYG-YNMCHGCTYEESLVSKYPAIGAAFR 274
            AD YMA  V  QY   + PTGVY   C EG+ +GAAD  RV ALS  FRA Q + A+KY D +E R+ A L  H C YEE+L   YP+++S   + ++EA  +C+RY TP +  EA M   +D Q    A  +GVY+ +C +    G+AE  RVAAL   +R   Q P+ +    +Y    Y   +  HGC+YEE++  +YPA+ AA R
Sbjct:  149 ADKYMAGCVRTQYKATAVPTGVYTTTCTEGTTKGAADFARVAALSAAFRAGQRTSAQKYSDYFEARRQATLGTHGCSYEEALVGVYPRVASAMVMGQAEATKSCVRYGTPGTPAEAYMAASVDRQMKERAVASGVYSPACTDAGAAGEAEAKRVAALATRFRAGHQSPLAKAQ-AKYDAAAYARLHFGHGCSYEEAVFERYPAVAAAMR 356          
BLAST of Gchil9995.t1 vs. uniprot
Match: A0A5J4YNU6_PORPP (R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNU6_PORPP)

HSP 1 Score: 134 bits (338), Expect = 8.670e-34
Identity = 76/215 (35.35%), Postives = 118/215 (54.88%), Query Frame = 0
Query:   68 ADGYMAKSVLNQYLNISQPTGVYGVQCAEGSVQGAADATRVRALSNRFRAKQASPAKKYGDLYENRKNAVLA-DHICQYEESLFTKYPKLSSTYNLARSEAYGTCIRYATPESVQEAAMMRYMDIQQNIAANPTGVYNSSCNEGTVRGQAEQLRVAALNVAYRNAQKPIGQIMNERYQQKKYGYNMCH-GCTYEESLVSKYPAIGAAFRQKSYGY 280
            AD +MA+S+  Q    +  +GVY  QC+EG+ +G A+  R  +L+ +FR  Q S  +   D YE RK A+ A  HIC YEE +F +Y K ++ Y + + E   +C RYA P +  E  + + + +Q    + P GVY +SC +GTV+G AE  RVA  +  +R  Q   G     R+  ++   +  + GC YEE L S++PA  ++ R  +  Y
Sbjct:  119 ADDFMARSIAMQAKASAAGSGVYTTQCSEGASKGMAENARTASLAKQFRQAQRSAREMSFDYYEGRKYAMKAVGHICNYEEKIFQQYNKTAAAYVMGKQETLLSCDRYAQPANKAEEYIQKSVQMQMKKRSIPYGVYTTSCADGTVKGMAENARVAKESANFRARQMSAGAKAAARFNARRVANDWHNNGCNYEEKLTSRFPAAASSVRPTTNRY 333          
BLAST of Gchil9995.t1 vs. uniprot
Match: A0A1X6PEH3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEH3_PORUM)

HSP 1 Score: 134 bits (338), Expect = 1.550e-33
Identity = 77/225 (34.22%), Postives = 118/225 (52.44%), Query Frame = 0
Query:   61 AATILNMADGYMAKSVLNQYLNISQPTGVYGVQCAEGSVQGAADATRVRALSNRFRAKQASPAKKYGDLYENRKNAVLADHICQYEESLFTKYPKLSSTYNLARSEAYGTCIRYATPESVQEAAMMRYMDIQQNIAANPTGVYNSSCNEGTVRGQAEQLRVAALNVAYRN-----AQKPIGQIMNERYQQKKYGYNMCHGCTYEESLVSKYPAIGAAFRQKSYGY 280
            AA  +++ D YMA SV+ QY   + P GVY  QC EG+V G A+A RV A++  FRA+Q++      + +E R+  ++A H C +EE     +P +++   + ++EA   C RY  P S  E  M   ++ Q      PTG + + C +G  +G+A   RVA  + A+R        K  G+   + Y   +YG    HGC YEE+L + YPA+  A R  +  Y
Sbjct:   40 AAPTMSVVDDYMAASVIRQYKAAAAPGGVYTPQCTEGAVPGDAEAKRVYAITQAFRARQSTTRAAAANRFETRRRGIIAAHGCSHEEGRVVAFPSMAANMVIGQAEALRACSRYQVPASKAEKYMADAVERQYAAIQCPTGEF-TVCTDGAAKGEAHAARVAGGSTAFRARTLSAGAKAQGRFNAQAYATAQYG----HGCGYEEALFAAYPAVAGAMRPSTGAY 259          
The following BLAST results are available for this feature:
BLAST of Gchil9995.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A2V3IHS8_9FLOR4.940e-12164.64R-phycoerythrin gamma chain, chloroplastic n=1 Tax... [more]
A0A291FEC5_GRIPA1.680e-9956.29LR gamma5 n=1 Tax=Griffithsia pacifica TaxID=35689... [more]
R7QDA3_CHOCR3.780e-9852.45Gamma 31 kDa subunit of phycoerythrin n=1 Tax=Chon... [more]
A0A5J4YZM7_PORPP7.530e-5948.61R-phycoerythrin gamma chain, chloroplastic n=1 Tax... [more]
Q7XYZ7_GRIJA1.600e-5650.71Phycoerythrin 31 kDa gamma subunit (Fragment) n=1 ... [more]
A0A1X6NK78_PORUM7.740e-5143.72Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6PF00_PORUM1.890e-4239.26Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6PK41_PORUM2.540e-4242.11Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YNU6_PORPP8.670e-3435.35R-phycoerythrin gamma chain, chloroplastic n=1 Tax... [more]
A0A1X6PEH3_PORUM1.550e-3334.22Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..280
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:206912..207754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9995.t1Gchil9995.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004442_pilon 206912..207754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9995.t1 ID=Gchil9995.t1|Name=Gchil9995.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=281bp
MIAFAPSTALTSARVATSGSSFTTNVPCVSPSRRPHNAPTMALRRSLVKP
TGTTGTSYGGAATILNMADGYMAKSVLNQYLNISQPTGVYGVQCAEGSVQ
GAADATRVRALSNRFRAKQASPAKKYGDLYENRKNAVLADHICQYEESLF
TKYPKLSSTYNLARSEAYGTCIRYATPESVQEAAMMRYMDIQQNIAANPT
GVYNSSCNEGTVRGQAEQLRVAALNVAYRNAQKPIGQIMNERYQQKKYGY
NMCHGCTYEESLVSKYPAIGAAFRQKSYGY*
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