Gchil9584.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9584.t1
Unique NameGchil9584.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length241
Homology
BLAST of Gchil9584.t1 vs. uniprot
Match: A0A2V3IR82_9FLOR (DUF1995 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR82_9FLOR)

HSP 1 Score: 339 bits (870), Expect = 2.200e-114
Identity = 148/240 (61.67%), Postives = 190/240 (79.17%), Query Frame = 0
Query:    1 MGRTRKHWYRMSPIAASHAETALLAFHYATLFKGLCIHLVLTHAAPLTHPVPWVHAVYHIDHHDVIAALSKPQRPEQHRVIILAAVRSKHASLLKSLASVKADAIILLNSFLDEPLASPVHPFVDTYVVRAMHKSAVMLSDYDAPWQVFIEISVFEYEWVGDCDNQWRPSQWRVDNFAFNRHAQTKSMNGYWRTPYAGCEAGFWPFMTLACRELLPLDGRILAKIKEEKKRKAQRPFGFF 240
            MGR+RKHWYRMSPIAASH E+ LLAFH+A LFKGLCIHLVL     L H VPW+HAV+ + HHD+ A L+ P RP++ RV+ILAA+   H  L+K L S+ A A++L N  L  P++ PV PF + Y+ RA++K A+ L+ ++APW VF+EI+VFEYEWVGDCDN+W+PSQ  V+ FA  R+AQ KS+NGYWRTPYAGCEAGFWPFM++ CR++LP+DGR++AK +EEK +K QRPFGFF
Sbjct:   91 MGRSRKHWYRMSPIAASHEESCLLAFHFAELFKGLCIHLVLPQPCTLVHSVPWIHAVHLVHHHDLFATLAVPPRPDERRVVILAALHDHHLPLIKQLVSINAQAVLLFNCLLQHPMSEPVPPFTNVYISRALNKCAIFLNGHNAPWHVFVEIAVFEYEWVGDCDNEWQPSQRAVERFAVERNAQLKSINGYWRTPYAGCEAGFWPFMSVVCRDVLPVDGRVIAKTREEKLKKNQRPFGFF 330          
BLAST of Gchil9584.t1 vs. uniprot
Match: R7QTI1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTI1_CHOCR)

HSP 1 Score: 177 bits (450), Expect = 5.580e-52
Identity = 100/247 (40.49%), Postives = 142/247 (57.49%), Query Frame = 0
Query:    1 MGRTRKHWYRMSPIAASHAETALLAFHYATLFKGLCIHLVLTHAAPLTHPVPWVHAVYHIDHHDVIAALSKPQRPEQHRVIILAAVRSKHASLLKSL-ASVKADAIILLNSFLDEPLASPVHPFVDTYVVRAMHKSAVMLSDYDAPWQVFIEISVFEYEWVGDCDNQ--WRPSQWRVDNFAFNRHAQTKSMNGYWRTPYAGCEAGFWPFMTLACRELLPLDGRILAKIKEEK----KRKAQRPFGFF 240
            MGR+R+ WYRMSP A +  E+++LA H+A +FKGL + + +   A     V W   V   D   V+         +   V+++ A   +   + + L AS  A A++L N  +D P+        D YV RAM K AV+     APW VF+EI+VFEYEWVGD   +  W P+Q  V+ +  +R A +K + GYW T ++GCE GFWPFMT+A  E LP+DGR + + ++EK     +KA RPFGFF
Sbjct:    7 MGRSRRFWYRMSPPAMAVRESSVLALHFAQIFKGLRLVIAMAEGAEPAQKVDWAAVVDLSDASRVVR--------DAEVVVVVGAGAGRRREVDQVLEASRLARAVVLFNCLMDAPIEDRWERAEDVYVCRAMDKCAVLREGAGAPWSVFVEIAVFEYEWVGDRREEAGWVPAQGNVERYVASRGA-SKKVKGYWSTAFSGCEGGFWPFMTIAMTETLPIDGRAMEEERQEKAEKKNKKAGRPFGFF 244          
The following BLAST results are available for this feature:
BLAST of Gchil9584.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IR82_9FLOR2.200e-11461.67DUF1995 domain-containing protein n=1 Tax=Gracilar... [more]
R7QTI1_CHOCR5.580e-5240.49Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..240
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:5015164..5015886 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9584.t1Gchil9584.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 5015164..5015886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9584.t1 ID=Gchil9584.t1|Name=Gchil9584.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=241bp
MGRTRKHWYRMSPIAASHAETALLAFHYATLFKGLCIHLVLTHAAPLTHP
VPWVHAVYHIDHHDVIAALSKPQRPEQHRVIILAAVRSKHASLLKSLASV
KADAIILLNSFLDEPLASPVHPFVDTYVVRAMHKSAVMLSDYDAPWQVFI
EISVFEYEWVGDCDNQWRPSQWRVDNFAFNRHAQTKSMNGYWRTPYAGCE
AGFWPFMTLACRELLPLDGRILAKIKEEKKRKAQRPFGFF*
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