Gchil9556.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9556.t1
Unique NameGchil9556.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length413
Homology
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BLAST of Gchil9556.t1 vs. uniprot
Match: R7QEG6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEG6_CHOCR)

HSP 1 Score: 233 bits (593), Expect = 1.420e-68
Identity = 153/278 (55.04%), Postives = 188/278 (67.63%), Query Frame = 0 
Query:  119 PTPR-PAILNRHPSPFPSSSPISSPRRPRRTGTSLPS---HRVVSDGQF-ESAEGLNQFSARDEFEEQFLNRQFAGS--ESQIISDVLEDVDFHQLDDDEELLSDDEHRYSSRHGAQDPYYPYKYTVQWAAERQSTVKSNWRRIPTEVGVDGCKGCERLCGENRRLRRQLDELEFELASGVLHNPSDGFDPP--VKAVPAIPQLQQPSRKKKKGWASMLRNSTVASVSSSKPSSERERLRSEVKALSVTTEYLWRKLNKAEIELRAYRRKDLRTRMRM 387
            P PR P +L+ HP      S  SSPRRPRR GT LP    H  VSD +  ESA G     ARDEFEE+FL +  A    E ++I+  LE VDF QLDDDEE+LS  E    S    Q+   P          +QSTV+S+W+RIPTEVG        RLCGENRRLRRQ+DELEFELASGVLHNP+DGFDPP  + AVP +PQ+   S K+K+GW S ++N T+AS++ +K +SE+ERL+S+V AL+VTTEYLWRKLN AE+ELR YR KDLR RM++
Sbjct:  171 PIPRLPIMLSPHPFSRRVRSSSSSPRRPRRAGTGLPHLSHHTSVSDFELGESASGDRP--ARDEFEEEFLAQGVAEHDVEGKLINSHLERVDFRQLDDDEEVLS--ESGSPSEKNQQEKKSP---AQAMKKAKQSTVRSDWKRIPTEVGCAXXXXXARLCGENRRLRRQMDELEFELASGVLHNPADGFDPPAVMSAVPILPQIPV-SAKRKRGWGSKMKNPTIASLNGAK-ASEKERLKSKVNALTVTTEYLWRKLNMAEMELRTYRLKDLRNRMKL 439
The following BLAST results are available for this feature:
BLAST of Gchil9556.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QEG6_CHOCR1.420e-6855.04Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 267..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..175
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 9..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:4887147..4888385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9556.t1Gchil9556.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 4887147..4888385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9556.t1 ID=Gchil9556.t1|Name=Gchil9556.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=413bp
MSPSPSPPPPPPPPPPPPPQPSVRVPQPGAVPQPPPPPPSLGKVHNGGRT
GAHHESSVVSPSPHSAPLVSIPIDSPPLESIPIASTPSASPLSASLPPVS
RLPLLRKSSSTASSSDSNPTPRPAILNRHPSPFPSSSPISSPRRPRRTGT
SLPSHRVVSDGQFESAEGLNQFSARDEFEEQFLNRQFAGSESQIISDVLE
DVDFHQLDDDEELLSDDEHRYSSRHGAQDPYYPYKYTVQWAAERQSTVKS
NWRRIPTEVGVDGCKGCERLCGENRRLRRQLDELEFELASGVLHNPSDGF
DPPVKAVPAIPQLQQPSRKKKKGWASMLRNSTVASVSSSKPSSERERLRS
EVKALSVTTEYLWRKLNKAEIELRAYRRKDLRTRMRMNDDRGDAHHPEAD
VLISASGNGHDW*
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