Gchil9436.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9436.t1
Unique NameGchil9436.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1271
Homology
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BLAST of Gchil9436.t1 vs. uniprot
Match: R7QE60_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE60_CHOCR)

HSP 1 Score: 72.8 bits (177), Expect = 3.710e-9
Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 0 
Query: 1187 KAQASKDKKKRQWRELAHLPVDDVRIEEGAG---PRRSKRQRFPRLKYWKNEVVSYERRTSQIMPTVAEVLVDVGETDSEEA 1265
            K  AS+ + KR      +LP D+   EEG     PRRSKR++FP L+YWKNE   YERR SQ++PT++EV+V V + D +E+
Sbjct:  717 KRDASRGELKRLGLSSVYLPKDEKTPEEGGDGKQPRRSKRRKFPPLQYWKNEKKVYERRMSQLLPTISEVVVAVDQVDGKES 798
The following BLAST results are available for this feature:
BLAST of Gchil9436.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QE60_CHOCR3.710e-947.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 446..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 783..807
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 808..822
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 979..1206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 573..628
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 690..714
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 642..666
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 835..860
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1016..1031
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1046..1060
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 783..860
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..505
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 646..666
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 982..999
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 688..714
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1073..1087
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1175..1193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..482

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:4125911..4129723 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9436.t1Gchil9436.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 4125911..4129723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9436.t1 ID=Gchil9436.t1|Name=Gchil9436.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1271bp
MEPNDAPLDMKSQSLPSATVALQPALFVHPPAADDFNLTALDNLPRNVAG
LQSYSDFVKAACKSLPAGNIAHQPDDDRNKSICIRGHPFRFVGVPICDSE
CSYQSDITISSGQGAEESLGPDEAPISAPVPAWTPTASPAKSILRRSSHA
PLPPSQPSPKPLVFDYASSASPASRRMSSVSLCASSKRASAQKRRLSFDT
GVQVQEPVETTEAEYRKASVSARKIRSRRSSMSSRRLSSTSTCRPATYAG
FEPSGLTDAGALLCETNGRKFLLVVDDVEPEEQVGTQCQPLDIDVEMDLL
FEKMDEAEDDDESIMEVEHMRSAAVPPGSQYVGHGDLVSIKTVAEGVQSH
VAPNFTPLISLTDLPSTPGPYSNRSARCSNAPSEPRAIASQIHTESGTCP
IQPLTQNSLGTPSKSVGTNSLSTVKEDNVDRESIKGTPPPASPTCQSDLN
EQNESVNDESMEHETESDHCASQRKYDLQNESLDHKMANTSQGEEQADDA
VTTGKDLENEEEIVATTAHATRTRSSHKRPPVARLISATPSKSIGIVEVP
DTSVDSNHASIPDIQKDVLVEILQESEHPESEVFDSTPINLDQPPPEAHP
VDNSDNSDAQVEKQKVAEPVSAPENDPAEVLVETTEVADSVAVQLPASSG
DKSDSSTQATVPSSGVGNAEFVTQEWAAISITPASSHVKNDGEYRSEKSP
KTAPAHHGTEGDLRAHEASNMRGAGIRLCTNVSQINIEPKVTAYQLAVLQ
TLTPNTKTALAKIRGNKGPFVVEGVRVSPVNSAATHRQRTKVVSEVVRNV
QNHERGTSISRSARDHNSSRAEPHLQLEQSSAHSKSKENANDLENKQRLP
HGRLEAETKDRSIQVSGVHCSLDVPSGRLQNCCTADNNLLASPEPRQPEM
LMRASIDNVPGTPIEFKKSQMKLGGVEELFDHADQLQDIKLASSVDFAGL
ISPAPLARQMVLDKKEFANIDAEDSDGNLEAVSVRRMTTRSTSRSTARRT
TSSRKTKSVEQNQSVKNDNESKHEEEIGKDSLAAEFPPTQHTRKSGEADF
VAHCEQNIDECDGPEDFEDHGDEDFDNDHHGCFEQEDDLEDGNLEISGVE
APVEPLKERSKKLSVSSSRKRHAQGDILSSETMYEPLKHSNCKEDDSQVQ
PSPSSPPPTEMPSSETSSPVIRRNPNRASKRKKVSRKAQASKDKKKRQWR
ELAHLPVDDVRIEEGAGPRRSKRQRFPRLKYWKNEVVSYERRTSQIMPTV
AEVLVDVGETDSEEAWMPRW*
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