Gchil9433.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9433.t1
Unique NameGchil9433.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length164
Homology
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BLAST of Gchil9433.t1 vs. uniprot
Match: M1V6V8_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V6V8_CYAM1)

HSP 1 Score: 59.3 bits (142), Expect = 1.170e-7
Identity = 39/127 (30.71%), Postives = 75/127 (59.06%), Query Frame = 0 
Query:   35 ALVALVRLRDSLRDLAQDMESGTNS-DVRRIVRTLLRAADVPRALSTATRA-LPVAS-RERALGQGRDAYEFLNQIVEYYDAMANRAVPPPQVVQFWLRCVAAAREQLDALLEAFDDADVRVARERV 158
            ALV + R  D+L +L + +E   ++  +R+ +R +++ +++ +++ +A    LP    R+ AL +G DA E+L+Q+  YY+ ++   VP  ++  F +  V AA+++L A L+AF   +V  AR  V
Sbjct:   90 ALVQVCRAYDALDELVRLIEQSQDTRSLRQTIRIIVKQSNLKQSIKSAANGRLPAGPIRDAALREGLDALEYLSQVTAYYNPVSK--VPTLEMRSFAIESVKAAKQRLQAYLDAFPPDEVERARRTV 214
The following BLAST results are available for this feature:
BLAST of Gchil9433.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
M1V6V8_CYAM11.170e-730.71Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..152
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..163
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:4121469..4121960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9433.t1Gchil9433.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 4121469..4121960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9433.t1 ID=Gchil9433.t1|Name=Gchil9433.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=164bp
MVLSRRALLPLLPLLPLLPLLAARAAPLDQEAATALVALVRLRDSLRDLA
QDMESGTNSDVRRIVRTLLRAADVPRALSTATRALPVASRERALGQGRDA
YEFLNQIVEYYDAMANRAVPPPQVVQFWLRCVAAAREQLDALLEAFDDAD
VRVARERVLQPLS*
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