Gchil9421.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9421.t1
Unique NameGchil9421.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length284
Homology
The following BLAST results are available for this feature:
BLAST of Gchil9421.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 4..40
e-value: 0.009
score: 25.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 4..41
score: 10.674659
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..58
e-value: 1.0E-10
score: 42.7
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 3..46
e-value: 7.8E-10
score: 38.4
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 3..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3975562..3976485 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9421.t1Gchil9421.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3975562..3976485 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9421.t1 ID=Gchil9421.t1|Name=Gchil9421.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=284bp
MSNCVVCLTAPVTTRLLPCKHVAICHACCPRLETPLCPLCRARIYDVQLL
DSDTTLSFSSLLKARAVYENRVVDTVAQVVVCSRSDAHAAALRYVSTVCA
LFPSKAVSVSKPPALRQVPYESRFAPNAFIDSTPVRLHVFLLPDRPSRQT
LSALRSLRPDFLLMACLLSPRHSFHFMLNWDATLRTNPSTFPLPKRMWLF
LLQPLLPLHKTSSPNLEFKEDVYHALQAMPLLFRPLTYHVVNPLATWTRP
VKKMSKRIVYHVRMSRVLSVAHLHRPIPVRKIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD