Gchil9413.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9413.t1
Unique NameGchil9413.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length533
Homology
BLAST of Gchil9413.t1 vs. uniprot
Match: R7QKF5_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 297 bits (761), Expect = 2.590e-85
Identity = 219/840 (26.07%), Postives = 325/840 (38.69%), Query Frame = 0
Query:    1 MEITGTRYSKIWSALSSTVGRRQRVEDFVEGWFNFPQRANAMITELEDELASVNRTFLYVPGITIFSFEDDHQRLRSKAVAQFPAMCHINNPQKALGPLNNAICSALNPVFLASHYSRPGEKLIHVCERLVRLIQGVTTSGPVRPMVDSIFASDRGYNVRAKIDDINDRLDAT-------------------------GLV-------------------------------YRESFSGRIAAIYHNNDRLFSATKFTLIPRAGHQKQSSSKQRELFHLVFEGSVTTNVKNDGYENDIAVSLPRMKVSPVISRVDEIKLLQSQDPGWFLSRAFQFTS---HNY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DELVACEVEIKTMTALNTIEAARQRRHSLAPITYINDIGQNEESLKQFQALVPSTEYRIQCVHHALSFNLNYVMFVLTKGSNCGVGQVIYIAILEFHKSLKAMYSYILGSIHVGAFEWVGKGASAITNEYDDLLQTSHASDLHSYASYYSLSQAYKTLARNCGT-LPPARMIRPTAFVYCNYLKGGVNEFSRAMTSLCYKNSGENPIVSIIGRFLCAQVNNAAVVHCLSVARRKGRLPDQFEEMQRKG 531
            M ++  RY ++WSAL+    +R  V+    GW     R  ++IT++E E+A+VNR  LY+PG T+ S +DDH R+ S+AV+    +   NNP+K LGP+ N + SAL  VF A H++R GEKL+H  ERL  L+QG +T+G ++PM D+IFA+DRGYN +  ++ ++  L A+                         G+V                               YRES SGRIAA+ HNN RLF +  FT++P +  + Q          ++F+     ++        +  +    +V   ++R+  +   QS+DP WFL RAF+FTS   H++                                                                                                                                                                                                                                                         +E   C  EIKTMTAL T+  A   R    P+T ++D+G    + + F+ L+PST+YR QC+HHA +  L +V+F++    +   GQ+IY  +++F + ++  Y++ L S+    F WVG+    I  EYD LL+ SHASD++S+ASYYSLS   + L    G  +PPARMIR T  V+ N+LKGGV+   R + +L   N  ENP+ SII R L  QVNNAA+   L  AR  G+LP       +KG
Sbjct:  318 MGLSAARYRQVWSALTGCREKRTAVDYSTTGWCRTASRTTSLITDIESEVAAVNRELLYIPGATVLSLDDDHLRMASRAVSSLSFLQQHNNPKKGLGPVGNTLGSALTSVFFACHFTRRGEKLLHTWERLAPLLQGASTTGALKPMADAIFAADRGYNTKETLNFVSKTLGASLLGTHKRDMTYPFVFGSGAITRRSKGMVVSEKGCRAVYVATLKSNLSVRRSGRELEACLYRESCSGRIAAMIHNNRRLFKSRSFTIVPHSRFRGQEPLSVLAEEQVIFDADRRVSLPQGEQSAKVLNTPGSNQVDQALARIKILTFNQSEDPVWFLLRAFRFTSRTGHSFLATVTRDFENHVSSLAWALRGKQLAVGSDTLPQDHSSCEQLLRVKWECVCKLFGMRLGAEPQPSERRDLALRLERYSRSRINLFNRNDLQQMLGGFARGLSGAPSKTVLVNAVLQLQADIGAGTVELDDDGADSVSLSASLTERASKILQKLREASLHAWVMKPLVSTAGMKEGSRNEIEVLKAIPSFLSKTRGAYARTRGVFNAVEYAHSDIRKIVIRHIPSVGLVESKSSTMIADSPDGILACKNEIEESFVCAAEIKTMTALTTVSEATHLREQFGPLTILSDVGSCGAADELFRTLIPSTQYRAQCLHHAATLGLKHVLFIVASSGSVTHGQIIYGCLIQFSEYIRHSYTFTLDSVLSMGFGWVGREPKYIPREYDALLKESHASDINSFASYYSLSTGIRRLIDKDGRPMPPARMIRLTPAVFWNHLKGGVDVIYRYLKTLARSNISENPVTSIIARLLVMQVNNAALCFRLFKARELGKLPATIPMENKKG 1157          
BLAST of Gchil9413.t1 vs. uniprot
Match: R7QLD7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLD7_CHOCR)

HSP 1 Score: 190 bits (482), Expect = 4.520e-54
Identity = 92/167 (55.09%), Postives = 119/167 (71.26%), Query Frame = 0
Query:    2 EITGTRYSKIWSALSSTVGRRQRVEDFVEGWFNFPQRANAMITELEDELASVNRTFLYVPGITIFSFEDDHQRLRSKAVAQFPAMCHINNPQKALGPLNNAICSALNPVFLASHYSRPGEKLIHVCERLVRLIQGVTTSGPVRPMVDSIFASDRGYNVRAKIDDIND 168
            +I+G+RY ++WSALS T  +R+  E    GW N P   NA+IT +E ELA++NR  ++V G+TI+S +DDH RL S+AV     +  + NP+KALGP+NNA CSAL   F+ASHYSRP EK+ HV  RLV+LIQGV T G +RPMVDSIFASDRGYN    I  +N+
Sbjct:   21 KISGSRYKEVWSALSGTKRKREGFEQSECGWLNKPVAGNALITYMEGELAAINRRLVHVEGVTIYSVDDDHNRLSSRAVLHLTNLSQVTNPKKALGPVNNAACSALTHAFIASHYSRPHEKITHVWHRLVQLIQGVPTVGALRPMVDSIFASDRGYNEVETISFLNE 187          
BLAST of Gchil9413.t1 vs. uniprot
Match: R7Q7A3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7A3_CHOCR)

HSP 1 Score: 170 bits (430), Expect = 5.300e-44
Identity = 91/226 (40.27%), Postives = 134/226 (59.29%), Query Frame = 0
Query:  297 MTALNTIEAARQRRHSLAPITYINDIGQNEESLKQFQALVPSTEYRIQCVHHALSFNLNYVMFVLTKGSNCGVGQVIYIAILEFHKSLKAMYSYILGSIHVGAFEWVGKGASAITNEYDDLLQTSHASDLHSYASYYSLSQAYKTLARNCGT-LPPARMIRPTAFVYCNYLKGGVNEFSRAMTSLCYKNSGENPIVSIIGRFLCAQVNNAAVVHCLSVARRKGRLP 521
            MT++ ++E+A   R    P+  + ++G ++ S   F+ LV +  YR Q +HHA +  +N V+FV+  G +   G ++Y+  + F + ++  Y+Y L  +   AF+WVG+G+  +  +YD LLQ +HASDL+S+ SYY LSQA +      G  +PPARMIR T  VY N  KGGV+  SR + +L   N  E P+VSII R L  QVNNAAV + L  A     LP
Sbjct:    1 MTSVRSVESATTLRARYGPVVSLRNVGTSDRSTGLFKELVGTPAYRAQVLHHAATLGVNNVLFVVGTGGSITKGGIVYVCHIVFAEHMRHNYTYALDCVRTAAFKWVGEGSERVPEQYDALLQNTHASDLYSFVSYYGLSQAIRHEVITRGEPIPPARMIRLTPAVYWNNPKGGVDVISRYVKTLARSNMSECPVVSIIARLLSMQVNNAAVAYRLHKAESLKLLP 226          
BLAST of Gchil9413.t1 vs. uniprot
Match: R7Q9D7_CHOCR (EF-hand domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9D7_CHOCR)

HSP 1 Score: 112 bits (280), Expect = 2.190e-22
Identity = 76/224 (33.93%), Postives = 111/224 (49.55%), Query Frame = 0
Query:  120 GEKLIHVCERLVRLIQGVTTSGPVRPMVDSIFASDRGYNVRAKIDDINDRLDATGL----------------------------------------------------------VYRESFSGRIAAIYHNNDRLFSATKFTLIPRAGHQKQSSSKQRELFHLVFEGSVTTNVKNDGYENDIAVSLPRM----KVSPVISRVDEIKLLQSQDPGWFLSRAFQFTS 281
            GEKLIH  ERLV+L+QGV+T+G +RPM  +IFA+DRGYN +  I+ I+D L A+ L                                                          VYRES SGRIAA+ HNN  LF +  FT++ R  ++ +S+ ++ E   +V++    T V         + ++PR+    +V  V+++V  +  LQS+DP WFL RAF+FTS
Sbjct:  424 GEKLIHTWERLVQLLQGVSTTGSLRPMPGAIFAADRGYNSKVTIEFISDVLGASLLGTHKRDLWFPFVFGDGPITRRHRGMVVSERGCRAVYTARLKEGPSSSRASNLRAVEACVYRESCSGRIAALVHNNGALFPSRCFTIVCRDSYRAESAVRKLEAALIVYDEPWKTAVSTQRPTRSSSHAIPRVSAKSRVQQVLAQVRCLTYLQSEDPVWFLLRAFRFTS 647          
BLAST of Gchil9413.t1 vs. uniprot
Match: R7Q906_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q906_CHOCR)

HSP 1 Score: 77.4 bits (189), Expect = 6.790e-14
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   45 ELEDELASVNRTFLYVPGITIFSFEDDHQRLRSKAVAQFPAMCHINNPQKALGPLNNAICSALNPVF 111
            E+E E A++NR  LY+P  T+FS +DDH R+   A+     +  +NN +K+LGPL+NA+CSALNP F
Sbjct:    2 EIESETAAINRELLYIPNATVFSLDDDHLRMAFSALVVLTHLRQLNNQKKSLGPLDNALCSALNPFF 68          
BLAST of Gchil9413.t1 vs. uniprot
Match: R7QIE1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIE1_CHOCR)

HSP 1 Score: 80.5 bits (197), Expect = 2.290e-13
Identity = 51/164 (31.10%), Postives = 82/164 (50.00%), Query Frame = 0
Query:  176 VYRESFSGRIAAIYHNNDRLFSATKFTLIPRAGHQKQSSSKQRELFHLVFEGS-VTTNVKNDGYENDIAVSLPR-------MKVSPVISRVDEIKLLQSQDPGWFLSRAFQFTSHNYDELVACEVE--IKTMTALNTIEAARQRRHSLAPITYINDIGQNEESL 329
            VYRES+SGRIAA+Y N+   F A  + LIP+ G + +      E   L+F+    +   + +GY    A    R       +KV  ++  + +  +LQS+DPGWFL RAF+FTS   +  +       I  +  L+ +   ++ R    P+T  +D+   E+ L
Sbjct:   30 VYRESYSGRIAAVYSNDSTRFGAHHYCLIPKDGFRHKFDCDAEERLQLIFDNRRASAECEEEGYNLPNASVTQRALSNSAVLKVLQLLGHLLQFTILQSEDPGWFLGRAFKFTSRTSNNFIGAIARNYICNIAGLSFLLRGKRLRAGFEPLT--SDLKNLEKDL 191          
BLAST of Gchil9413.t1 vs. uniprot
Match: A0A2V3IVJ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ7_9FLOR)

HSP 1 Score: 75.5 bits (184), Expect = 1.380e-11
Identity = 41/94 (43.62%), Postives = 53/94 (56.38%), Query Frame = 0
Query:  195 LFSATKFTLIPRAGHQKQSSSKQRELFHLVFEGSVTTNVKNDGYENDIAVSLPRMKVSPVISRVDEIKLLQSQDPGWFLSRAFQFTSHNYDELV 288
            +F ++KFTL+P+AG Q   S+   E FH V+E            E    + L R KV  V+S V E+  LQSQDPGWFL+RAFQFTS      +
Sbjct:    1 MFKSSKFTLVPKAGCQHLISNADLEQFHRVYERQ----------EGTYGLYLARYKVGQVVSEVFEVIALQSQDPGWFLARAFQFTSQTTSNFI 84          
BLAST of Gchil9413.t1 vs. uniprot
Match: A0A2V3IWD9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWD9_9FLOR)

HSP 1 Score: 67.4 bits (163), Expect = 6.070e-10
Identity = 38/91 (41.76%), Postives = 48/91 (52.75%), Query Frame = 0
Query:  198 ATKFTLIPRAGHQKQSSSKQRELFHLVFEGSVTTNVKNDGYENDIAVSLPRMKVSPVISRVDEIKLLQSQDPGWFLSRAFQFTSHNYDELV 288
            ++KFTL+P+AG Q   SS   E FH V+E            E    + L R KV  V+S V  +  LQS DPGWFL RA+QFTS      +
Sbjct:    4 SSKFTLVPKAGCQHLKSSADLEQFHRVYERQ----------EGTYGLYLDRYKVGQVVSGVIGVAALQSHDPGWFLVRAYQFTSQTTSNFI 84          
BLAST of Gchil9413.t1 vs. uniprot
Match: A0A2V3ITK4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITK4_9FLOR)

HSP 1 Score: 66.2 bits (160), Expect = 1.810e-8
Identity = 41/132 (31.06%), Postives = 63/132 (47.73%), Query Frame = 0
Query:  248 RMKVSPVISRVDEIKLLQSQDPGWFLSRAFQFTSHNYDELVA----------CEVEIKTMTALNTIEAARQRRHSLAPITYINDIGQNEESLKQFQALVPSTEYRIQCVHHALSFNLNYVMFVLTKGSNCGV 369
            +MK      R D I+ +     G   SR++   S + D L+           C  EIKTM  + T E  R    +      I+ +G++ ++    Q LV ST+YR++C+HHA+    N V FV+ K S CG+
Sbjct:  133 KMKGDTFKYRADYIRTI-----GLISSRSYLMISDSPDALMVYLDKQEARHVCAFEIKTMNTVRTTEDTRDVSRTFGSSILISGVGRSVDAGLVLQQLVSSTDYRLECLHHAVCLKANKVCFVVAKVSTCGI 259          
The following BLAST results are available for this feature:
BLAST of Gchil9413.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
R7QKF5_CHOCR2.590e-8526.07Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7QLD7_CHOCR4.520e-5455.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q7A3_CHOCR5.300e-4440.27Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q9D7_CHOCR2.190e-2233.93EF-hand domain-containing protein n=1 Tax=Chondrus... [more]
R7Q906_CHOCR6.790e-1449.25Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QIE1_CHOCR2.290e-1331.10Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IVJ7_9FLOR1.380e-1143.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IWD9_9FLOR6.070e-1041.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITK4_9FLOR1.810e-831.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3948080..3950580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9413.t1Gchil9413.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3948080..3950580 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9413.t1 ID=Gchil9413.t1|Name=Gchil9413.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=533bp
MEITGTRYSKIWSALSSTVGRRQRVEDFVEGWFNFPQRANAMITELEDEL
ASVNRTFLYVPGITIFSFEDDHQRLRSKAVAQFPAMCHINNPQKALGPLN
NAICSALNPVFLASHYSRPGEKLIHVCERLVRLIQGVTTSGPVRPMVDSI
FASDRGYNVRAKIDDINDRLDATGLVYRESFSGRIAAIYHNNDRLFSATK
FTLIPRAGHQKQSSSKQRELFHLVFEGSVTTNVKNDGYENDIAVSLPRMK
VSPVISRVDEIKLLQSQDPGWFLSRAFQFTSHNYDELVACEVEIKTMTAL
NTIEAARQRRHSLAPITYINDIGQNEESLKQFQALVPSTEYRIQCVHHAL
SFNLNYVMFVLTKGSNCGVGQVIYIAILEFHKSLKAMYSYILGSIHVGAF
EWVGKGASAITNEYDDLLQTSHASDLHSYASYYSLSQAYKTLARNCGTLP
PARMIRPTAFVYCNYLKGGVNEFSRAMTSLCYKNSGENPIVSIIGRFLCA
QVNNAAVVHCLSVARRKGRLPDQFEEMQRKGV*
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