Gchil9411.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9411.t1
Unique NameGchil9411.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length270
Homology
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BLAST of Gchil9411.t1 vs. uniprot
Match: A0A2V3IE32_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE32_9FLOR)

HSP 1 Score: 175 bits (444), Expect = 1.160e-50
Identity = 112/233 (48.07%), Postives = 139/233 (59.66%), Query Frame = 0 
Query:   33 LVPRAFVAAATRWARGEATPHDDAAMSALSLHRPLPAAFDADALGFDPVTRLPPVHALSLFDAAKNRARARFHVDAAVAARAALRDVVRSPFSTQRRAVVHFPRALAALPACAGLAAAVRLALARRFCVRWTVDAVVLEAAGVAFVRAAFDAGFVPRFDEEDPQRVVFVSNPNLSDAALRRLLLRLRHA--ADHDVLPAGEAALTELARQP--HDDDEPFNCADLLAYGHSAF 261
            +VP AF AAA RWA G A+  D AAM +++   PLP+ FDA  LGFDP TRLP   AL LF+A KN AR  FHV  A   + A+   + SP          FP  L A PA  GLAAA +L L R  CV+WTV   VLE+AGV F+ AA +AGF P  D E  ++V+F S P +SD+ALRRL   L      +H VLP G A+LT L R     DDD+ F+C  LL++G + F
Sbjct:   13 VVPAAFRAAAARWASGTASAEDTAAMLSVTAQTPLPSTFDALRLGFDPHTRLPTAAALPLFNAVKNDARTAFHVSLADTNQRAILKAINSPIPAP------FPSGLHAAPARRGLAAAAKLGLYRTTCVQWTVSRAVLESAGVHFIGAAHEAGFEPSIDVEGLEQVLFTSRPQVSDSALRRLYDELMDDDFVEH-VLPPGAASLTHLPRAQLEDDDDDDFDCTQLLSFGAATF 238
The following BLAST results are available for this feature:
BLAST of Gchil9411.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IE32_9FLOR1.160e-5048.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3922260..3923069 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9411.t1Gchil9411.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3922260..3923069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9411.t1 ID=Gchil9411.t1|Name=Gchil9411.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=270bp
MRRGSGALGGDGGKDDGVDGVDGVDGVDGVDGLVPRAFVAAATRWARGEA
TPHDDAAMSALSLHRPLPAAFDADALGFDPVTRLPPVHALSLFDAAKNRA
RARFHVDAAVAARAALRDVVRSPFSTQRRAVVHFPRALAALPACAGLAAA
VRLALARRFCVRWTVDAVVLEAAGVAFVRAAFDAGFVPRFDEEDPQRVVF
VSNPNLSDAALRRLLLRLRHAADHDVLPAGEAALTELARQPHDDDEPFNC
ADLLAYGHSAFYPQSNSKL*
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