Gchil9410.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9410.t1
Unique NameGchil9410.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length107
Homology
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BLAST of Gchil9410.t1 vs. uniprot
Match: A0A2V3IGK8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGK8_9FLOR)

HSP 1 Score: 60.8 bits (146), Expect = 7.110e-10
Identity = 57/115 (49.57%), Postives = 64/115 (55.65%), Query Frame = 0 
Query:    1 MKTISAVVLAIIGFAAAVPATHGPTT---------TVPTAAPTTAPMMTHDDVMISLPSGVSGAASGNNAVAAGADKHAGAAAAKTDSDGAALAGAGPGGAIGFASNFMGPTPSM 106
            MKT SAVV AIIGFAAAVPAT              +VP             DV   L SG  G A+GNNAV   AD+ +GAAA+KTDS G A A A PG A G A +  GPTP+M
Sbjct:    1 MKTFSAVVCAIIGFAAAVPATTAXXXXXXXXXXXXSVPV-----------PDVTAFLGSGTGGVATGNNAVVTAADQTSGAAASKTDSSGLAFASAAPGQAGGIAVS--GPTPAM 102
The following BLAST results are available for this feature:
BLAST of Gchil9410.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IGK8_9FLOR7.110e-1049.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..106
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3921616..3921936 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9410.t1Gchil9410.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3921616..3921936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9410.t1 ID=Gchil9410.t1|Name=Gchil9410.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=107bp
MKTISAVVLAIIGFAAAVPATHGPTTTVPTAAPTTAPMMTHDDVMISLPS
GVSGAASGNNAVAAGADKHAGAAAAKTDSDGAALAGAGPGGAIGFASNFM
GPTPSM*
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