Gchil9407.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9407.t1
Unique NameGchil9407.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length157
Homology
BLAST of Gchil9407.t1 vs. uniprot
Match: A0A2V3IXN5_9FLOR (Putative germin-like protein 2-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXN5_9FLOR)

HSP 1 Score: 209 bits (531), Expect = 1.350e-66
Identity = 104/152 (68.42%), Postives = 120/152 (78.95%), Query Frame = 0
Query:    5 AWGSIPSFLTQTNPEIRSKLADKDFSINPENGIILNTPNFRARIADVTNFPALGAQDVQTQIVRVTLKAKQTFIPHYHPRGTEVLNALAGKFRVTFKFEGLNPRSVSNVIHAGESTVFPQGLIHETVCISHHDCEFLSTFNSADPGLVPVSL 156
            A  SIPSF  Q+   IRS L D DF INP  G I+NTP F  +IA+V +FPALG QDVQ+QIVRV ++A Q FIPHYHPRGTE LNALAG FRV+F  EGL+PR+V+N++H G+STVFPQGL HETVCIS  DC FLS FNSADPGLVPV+L
Sbjct:   19 AAASIPSFGLQSAAGIRSGLQDSDFRINPSKGQIINTPGFTVQIANVADFPALGGQDVQSQIVRVLVRAGQPFIPHYHPRGTETLNALAGVFRVSFLSEGLSPRNVTNILHPGDSTVFPQGLPHETVCISKMDCLFLSVFNSADPGLVPVTL 170          
BLAST of Gchil9407.t1 vs. uniprot
Match: A0A2V3IWG7_9FLOR (Spherulin-1B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWG7_9FLOR)

HSP 1 Score: 197 bits (500), Expect = 7.030e-62
Identity = 97/152 (63.82%), Postives = 114/152 (75.00%), Query Frame = 0
Query:    5 AWGSIPSFLTQTNPEIRSKLADKDFSINPENGIILNTPNFRARIADVTNFPALGAQDVQTQIVRVTLKAKQTFIPHYHPRGTEVLNALAGKFRVTFKFEGLNPRSVSNVIHAGESTVFPQGLIHETVCISHHDCEFLSTFNSADPGLVPVSL 156
            A  SIPSF  QT   IRS L D DF INP  G I+    F  +IA+V +FPALG QDVQ+Q+ RV ++A Q F+PHYHPRGTE LNALAG FRV+F FEGLNPR+V+N++  G+STVFPQGL H T CIS  DC FLS FN+ADPGLVPV+L
Sbjct:   19 AAASIPSFGLQTAAAIRSGLQDSDFRINPSKGQIIKNEKFVVQIANVADFPALGGQDVQSQVARVLVRAGQPFLPHYHPRGTETLNALAGVFRVSFLFEGLNPRNVTNILRPGDSTVFPQGLPHATTCISKTDCLFLSVFNTADPGLVPVNL 170          
BLAST of Gchil9407.t1 vs. uniprot
Match: A0A2V3IBZ5_9FLOR (Cupin type-1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBZ5_9FLOR)

HSP 1 Score: 132 bits (331), Expect = 3.880e-36
Identity = 70/141 (49.65%), Postives = 88/141 (62.41%), Query Frame = 0
Query:    5 AWGSIPSFLTQTNPEIRSKLADKDFSINPENGIILNTPNFRARIADVTNFPALGAQDVQTQIVRVTLKAKQTFIPHYHPRGTEVLNALAGKFRVTFKFEGLNPRSVSNVIHAGES----------TVFPQGLIHETVCISH 135
            A  SIPSF  QT   IRS L D DF INP  G I+    F  +IA+V +FPALG QDVQ+Q+ RV ++A Q F+PHYH  GTE LNALAG FRV+F FEGL+PR+V+N++  G+           TV+ Q  +    C  H
Sbjct:   19 AAASIPSFGLQTAAAIRSGLQDSDFRINPSKGQIIKNEKFVVQIANVADFPALGGQDVQSQVARVLVRAGQPFLPHYHRAGTETLNALAGVFRVSFLFEGLSPRNVTNILRPGDPPSSRRVCPTPTVYQQDGLSFPFCFQH 159          
BLAST of Gchil9407.t1 vs. uniprot
Match: A0A2V3IBT1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBT1_9FLOR)

HSP 1 Score: 122 bits (305), Expect = 1.430e-31
Identity = 62/100 (62.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:   10 PSFLTQTNPEIRSKLADKDFSINPENGIILNTPNFRARIADVTNFPALGAQDVQTQIVRVTLKAKQTFIPHYHPRGTEVLNALAGKFRVTFKFEGLNPRS 109
            P F +   P IRS L D DF INP  G I+NT  F  +IA+V +FPALG QDVQ+QIVRV ++A Q FIPHYHPRGTE LNALAG FRV+F  EGL+P +
Sbjct:  136 PQFRSAIRPGIRSGLQDSDFRINPSKGQIINT-GFTVQIANVADFPALGGQDVQSQIVRVLVRAGQPFIPHYHPRGTETLNALAGVFRVSFLSEGLSPET 234          
BLAST of Gchil9407.t1 vs. uniprot
Match: R7QGS5_CHOCR (Cupin type-1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGS5_CHOCR)

HSP 1 Score: 108 bits (271), Expect = 4.020e-28
Identity = 51/92 (55.43%), Postives = 66/92 (71.74%), Query Frame = 0
Query:   66 IVRVTLKAKQTFIPHYHPRGTEVLNALAGKFRVTFKFEGL-NPRSVSNVIHAGESTVFPQGLIHETVCISHHDCEFLSTFNSADPGLVPVSL 156
            ++RV++KA +    H+HPR +E +  L GK  V F FEGL + R V+N +  GESTVFPQGL+HET CIS  DC FL+  NSADPG+VPVS+
Sbjct:    3 VIRVSVKAGRDLFTHFHPRASETVTLLRGKASVAFTFEGLGDARRVTNALRKGESTVFPQGLVHETTCISKKDCVFLAFLNSADPGIVPVSV 94          
BLAST of Gchil9407.t1 vs. uniprot
Match: A0A1X6P019_PORUM (Cupin type-1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P019_PORUM)

HSP 1 Score: 84.3 bits (207), Expect = 9.800e-17
Identity = 50/144 (34.72%), Postives = 70/144 (48.61%), Query Frame = 0
Query:   12 FLTQTNPEIRSKLADKDFSINPENGIILNTPNFRARIADVTNFPALGAQDVQTQIVRVTLKAKQTFIPHYHPRGTEVLNALAGKFRVTFKFEGLNPRSVSNVIHAGESTVFPQGLIHETVCISHHDCEFLSTFNSADPGLVPVS 155
            F T+ N  +R+    +DFS+   +     TP        + N    G   V +   R TL+     + H HP  +E L +++G   V F      PR V +V+     TVFP+GLIH   CIS   CEF+S FN+ DPG+V VS
Sbjct:   43 FTTEEN--LRANFDAEDFSVAIADITPTTTPQGAIVSGGLENLAVFGLSSVDSSFTRFTLQPGAHNLAHTHPTASETLFSISGTMDVFFVEANETPRLVQSVLGPESVTVFPEGLIHGERCISDEPCEFISFFNTGDPGVVTVS 184          
BLAST of Gchil9407.t1 vs. uniprot
Match: A0A1X6P0A0_PORUM (Cupin type-1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0A0_PORUM)

HSP 1 Score: 84.3 bits (207), Expect = 1.550e-16
Identity = 50/144 (34.72%), Postives = 70/144 (48.61%), Query Frame = 0
Query:   12 FLTQTNPEIRSKLADKDFSINPENGIILNTPNFRARIADVTNFPALGAQDVQTQIVRVTLKAKQTFIPHYHPRGTEVLNALAGKFRVTFKFEGLNPRSVSNVIHAGESTVFPQGLIHETVCISHHDCEFLSTFNSADPGLVPVS 155
            F T+ N  +R+    +DFS+   +     TP        + N    G   V +   R TL+     + H HP  +E L +++G   V F      PR V +V+     TVFP+GLIH   CIS   CEF+S FN+ DPG+V VS
Sbjct:  116 FTTEEN--LRANFDAEDFSVAIADITPTTTPQGAIVSGGLENLAVFGLSSVDSSFTRFTLQPGAHNLAHTHPTASETLFSISGTMDVFFVEANETPRLVQSVLGPESVTVFPEGLIHGERCISDEPCEFISFFNTGDPGVVTVS 257          
BLAST of Gchil9407.t1 vs. uniprot
Match: A0A1X6P0D4_PORUM (Cupin type-1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0D4_PORUM)

HSP 1 Score: 78.6 bits (192), Expect = 1.010e-14
Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 0
Query:   12 FLTQTNPEIRSKLADKDFSINPENGIILNTPNFRARIADVT----NFPALGAQDVQTQIVRVTLKAKQTFIPHYHPRGTEVLNALAGKFRVTFKFEGLNPRSVSNVIHAGESTVFPQGLIHETVCISHHDCEFLSTFNSADPGLVPVS 155
            F T+ N  +R+    +DFS+     I   TP    + A V+    N    G   V +   R TL+     + H HP  +E L +++G   V F      PR V +V+     TVFP+ LIH   CIS   CEF+S FN+ DPG+V VS
Sbjct:   42 FTTEEN--LRANFDPEDFSV----AIADITPTTTRQGAIVSGGLENLAVFGLSSVDSAFTRFTLQPGAHNLAHTHPTASETLFSISGTMDVFFVEANETPRLVQSVLGPESVTVFPESLIHGERCISDEPCEFISFFNTGDPGVVTVS 183          
BLAST of Gchil9407.t1 vs. uniprot
Match: UPI0014438EAC (germin family protein n=1 Tax=Acinetobacter indicus TaxID=756892 RepID=UPI0014438EAC)

HSP 1 Score: 66.2 bits (160), Expect = 2.420e-10
Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 0
Query:   34 ENGIILNTPNFRARIADVTNFPALGAQDVQTQIVRVTLKAKQTFIPHYHPRGTEVLNALAGKFRVTFKFEGLNPRSVSNVIHAGESTVFPQGLIHETVCISHHDCEFLSTFNSADPG 150
            +NG + N         +  NFPA+  Q +   +VR  + A  +++PH HPR +EVL+ L+G   +   F      S  ++++ G+ TVFP+G++H  + + + + E+LS  NS +PG
Sbjct:   47 KNGDVSNDTGGIRAATNPQNFPAVRTQGLS--VVRFKMVACGSYLPHTHPRASEVLSLLSGG-PLQVGFVDTTGASHIDILYPGDVTVFPRGVLHFELNVGNVEAEYLSALNSENPG 160          
BLAST of Gchil9407.t1 vs. uniprot
Match: A0A6P5GQ16_ANACO (Germin-like protein n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GQ16_ANACO)

HSP 1 Score: 61.6 bits (148), Expect = 1.260e-8
Identity = 41/128 (32.03%), Postives = 54/128 (42.19%), Query Frame = 0
Query:   27 KDFSINPEN--GIILNTPNFRARIADVTNFPALGAQDVQTQIVRVTLKAKQTFIPHYHPRGTEVLNALAGKFRVTFKFEGLNPRSVSNVIHAGESTVFPQGLIHETVCISHHDCEFLSTFNSADPGLV 152
            +DFS +  N  G   N   F   IA+V   P L    V   I R+         PH HPRGTE L  + G     F     N      ++H G+ TVFP G+IH  + I       +   NS +PG +
Sbjct:   54 EDFSFSGLNIPGNTKNKFGFNVTIANVMTLPGLNTLGVS--IARIDYAPHGVVPPHTHPRGTEFLTVIEGTLIAGFVTSNPNNTLYQQILHPGDVTVFPIGMIHFQLNIGKGPAVAIVGLNSQNPGFI 179          
The following BLAST results are available for this feature:
BLAST of Gchil9407.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A2V3IXN5_9FLOR1.350e-6668.42Putative germin-like protein 2-3 n=1 Tax=Gracilari... [more]
A0A2V3IWG7_9FLOR7.030e-6263.82Spherulin-1B n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A2V3IBZ5_9FLOR3.880e-3649.65Cupin type-1 domain-containing protein n=1 Tax=Gra... [more]
A0A2V3IBT1_9FLOR1.430e-3162.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGS5_CHOCR4.020e-2855.43Cupin type-1 domain-containing protein n=1 Tax=Cho... [more]
A0A1X6P019_PORUM9.800e-1734.72Cupin type-1 domain-containing protein n=1 Tax=Por... [more]
A0A1X6P0A0_PORUM1.550e-1634.72Cupin type-1 domain-containing protein n=1 Tax=Por... [more]
A0A1X6P0D4_PORUM1.010e-1435.14Cupin type-1 domain-containing protein n=1 Tax=Por... [more]
UPI0014438EAC2.420e-1031.62germin family protein n=1 Tax=Acinetobacter indicu... [more]
A0A6P5GQ16_ANACO1.260e-832.03Germin-like protein n=1 Tax=Ananas comosus TaxID=4... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 145..156
score: 27.03
coord: 80..100
score: 43.74
coord: 112..132
score: 39.09
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 29..153
e-value: 6.8E-4
score: 13.0
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 35..152
e-value: 3.4E-13
score: 49.4
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 8..156
e-value: 1.0E-25
score: 92.3
NoneNo IPR availablePIRSRPIRSR617774-2PIRSR617774-2coord: 26..147
e-value: 3.7E-5
score: 20.6
NoneNo IPR availablePANTHERPTHR31238GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3coord: 39..154
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 34..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3892356..3892826 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9407.t1Gchil9407.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3892356..3892826 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9407.t1 ID=Gchil9407.t1|Name=Gchil9407.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=157bp
MFASAWGSIPSFLTQTNPEIRSKLADKDFSINPENGIILNTPNFRARIAD
VTNFPALGAQDVQTQIVRVTLKAKQTFIPHYHPRGTEVLNALAGKFRVTF
KFEGLNPRSVSNVIHAGESTVFPQGLIHETVCISHHDCEFLSTFNSADPG
LVPVSL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf