Gchil9206.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil9206.t1
Unique Name	Gchil9206.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	544

Homology

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BLAST of Gchil9206.t1 vs. uniprot
Match: A0A2V3IYH1_9FLOR (DIRP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYH1_9FLOR)

HSP 1 Score: 751 bits (1940), Expect = 1.180e-268
Identity = 379/542 (69.93%), Postives = 441/542 (81.37%), Query Frame = 0

Query:    1 MRRKTAPXXXXXXXKRARAPSAPERVAASPRALHWAHAEWFQSAIDEPYFTHSDFHAVVASRMVQLSDMLSTRLTRLQLARIRAAMCNMLPGGFVQPRRFSPAFLFAEREELSMYRNDARRVLRGLDLLPSIDPTTGDALPQNWWSRHRCAPPTPLQRGAHILVRTCAPPQNGHTLAHLRIRPAIFLSLEADNKNRIRFQDDATEHIVSDLDVMLHPSSSIGSDSLAQSPLLPNAHSLARSPSSPPFPFSPSAMPTPVFDFSHFPEASQSVIQLYQSPRPTLISPRKTLEVKNQCGQNFECEVDFRRIAESMQLLDRKEQLLSSLRMLNDAVSATTTPGAPPSEATQAKFDFILAALDRVNTQINLHVEPDRSTPHPSPPSLFLSTDMESGKLDETPEKNQPMSVSLFKMAPTSPTPPKREGGSPGETVPRSPRLRPENMSRNVDFRGATGAAMLAKALTKAALAKLHPDNGIKTAPTPIRADVMECVSACVAVLVRARTTREIHCVNELIDGLRSRFPASSEAIDAIYAAARVLETSSSDS 542
            MRRK+ P       KRAR  S+ +    S  A HW H EWFQSA+D+PYFTHSDFHAVVASRM QLSD+LS+RLTR QL RIRAAMCNMLPGGFVQPRRFS  FL AER EL+MYRNDARRVLRGLDLLPS+DPTTGD LP NWWSRHRCAPP PL RGA +LVRT   P      AHL +RPAIFLSLEAD  NR+RFQDDA+EHIVSD+DVM+HPSSS  S+S+ QSPLLP A    RSP+S  F FSPS MP P+FDFS FP+AS SVIQLYQSPRPT++SPR+ LEVK Q G  FEC+VD  RIAESM+LLD+KEQLLSSL++LNDAVSAT  PG PPSEAT AK++ +L+AL++VN +IN+H+EP RS PHP PP+L++STDM+  K + TPE+   M +S+ K+APTSP   KR+ GSPG T+  SP+LRPENM++NVDFR ATG A+ AKALTKAAL++L  DN +K+AP P+RADVMECVSACVAVLVRAR TR+ HCV+ELIDGLRSRFPA++EAIDAI +AARVLETSSSDS
Sbjct:    1 MRRKSVPPQSASPPKRARPTSSADTAVLSMPAQHWPHTEWFQSALDDPYFTHSDFHAVVASRMTQLSDLLSSRLTRRQLCRIRAAMCNMLPGGFVQPRRFSSPFLLAERAELAMYRNDARRVLRGLDLLPSVDPTTGDQLPHNWWSRHRCAPPKPLSRGAQVLVRTLTQPSQPSKQAHLHVRPAIFLSLEADAHNRVRFQDDASEHIVSDMDVMIHPSSSSNSNSVVQSPLLPTAQPFDRSPASARFSFSPSTMPGPIFDFSTFPDASPSVIQLYQSPRPTIVSPRRPLEVKTQRGDQFECDVDVHRIAESMRLLDKKEQLLSSLKLLNDAVSATNAPGQPPSEATAAKYNSLLSALEQVNAEINMHLEPHRSNPHPPPPNLYISTDMDPSKFEYTPERKTSMPLSMLKVAPTSPKLHKRDAGSPGGTLAHSPQLRPENMAKNVDFRAATGTALFAKALTKAALSRLPQDNALKSAPAPVRADVMECVSACVAVLVRARATRDFHCVDELIDGLRSRFPANAEAIDAIQSAARVLETSSSDS 542

The following BLAST results are available for this feature:

BLAST of Gchil9206.t1 vs. uniprot

BLAST of Gchil9206.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IYH1_9FLOR	1.180e-268	69.93	DIRP domain-containing protein n=1 Tax=Gracilariop...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033471	DIRP domain	SMART	SM01135	DIRP_2	coord: 41..150 e-value: 4.4E-4 score: 4.7
IPR033471	DIRP domain	PFAM	PF06584	DIRP	coord: 40..124 e-value: 1.3E-11 score: 44.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..446
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 397..411
IPR010561	Protein LIN-9/Protein ALWAYS EARLY	PANTHER	PTHR21689	LIN-9	coord: 28..367

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004370_pilon	contig	tig00004370_pilon:2566579..2568210 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil9206.t1	Gchil9206.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004370_pilon 2566579..2568210 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil9206.t1 ID=Gchil9206.t1|Name=Gchil9206.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=544bp
MRRKTAPPPAPPPKKRARAPSAPERVAASPRALHWAHAEWFQSAIDEPYF
THSDFHAVVASRMVQLSDMLSTRLTRLQLARIRAAMCNMLPGGFVQPRRF
SPAFLFAEREELSMYRNDARRVLRGLDLLPSIDPTTGDALPQNWWSRHRC
APPTPLQRGAHILVRTCAPPQNGHTLAHLRIRPAIFLSLEADNKNRIRFQ
DDATEHIVSDLDVMLHPSSSIGSDSLAQSPLLPNAHSLARSPSSPPFPFS
PSAMPTPVFDFSHFPEASQSVIQLYQSPRPTLISPRKTLEVKNQCGQNFE
CEVDFRRIAESMQLLDRKEQLLSSLRMLNDAVSATTTPGAPPSEATQAKF
DFILAALDRVNTQINLHVEPDRSTPHPSPPSLFLSTDMESGKLDETPEKN
QPMSVSLFKMAPTSPTPPKREGGSPGETVPRSPRLRPENMSRNVDFRGAT
GAAMLAKALTKAALAKLHPDNGIKTAPTPIRADVMECVSACVAVLVRART
TREIHCVNELIDGLRSRFPASSEAIDAIYAAARVLETSSSDSA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR033471	DIRP
IPR010561	LIN-9/ALY1