Gchil9186.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9186.t1
Unique NameGchil9186.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length341
Homology
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BLAST of Gchil9186.t1 vs. uniprot
Match: A0A2V3IR85_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR85_9FLOR)

HSP 1 Score: 305 bits (782), Expect = 5.650e-99
Identity = 176/353 (49.86%), Postives = 224/353 (63.46%), Query Frame = 0 
Query:   10 LALFAALAHGQRLQIYQASVPGPISGWSAGPVLPPKITLCANDLPSPFTVVCIPDEGMSASSAKFYLNSVVVRTERQLPYVITGDMSSKGAFPWNNPPTVSEITCMLSGGQTVTSTILFSCDDD----------TETPTTXXXXXXXXXXXXXXXXXXXXXXRSSGTS--------------ACVYIPATGYESKTGAWMEGGGGMEYKFSDSTTKVDRAGLATMTYSFVAPLTARYGVTVDMLTSHGTEHNDIWLEVDGVPFTLVKKGSSQDGKSGMNKAYHNNNGRSKLVYTVDFNAHVFSTKPALEAGASYVVNIGGRSTKIRVYAIILFPCDAFGCAPGNQWNSAVNTC 338
            L L  ALA+ Q L+IYQASVPG +S W  GP+L  + TLC   +PSP TVVC+P       SA FY++    RTER +PY + GD    GA PW     V++++C+LS G +V STI F+C D           T  PTT     XXXXXXXXXXXXXXXXX                    +C+YI AT Y  KTGAW     GM YK ++ +T +D+ G+AT+ Y+F    + RY +TVDM T HGTEHND+W+E+  VPFTLV+   ++ G +GMNKAYHN NGRSK VYTVDF+ HVFST+ ALEAG  Y V +GGRSTK+ ++ +ILFPC  F CA G +WN+A+N+C
Sbjct:    7 LPLLLALANCQTLRIYQASVPGRMSNWQPGPLLQSESTLCPKHIPSPLTVVCLPGADKHVKSASFYIDGDFERTERVMPYTLKGDTFKAGARPWITRARVTKVSCVLSNGDSVASTITFACPDPSGPRSDVAPTTVPPTTTAASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCIYIDATKYMEKTGAWELVSNGMAYKRNNPSTGIDKPGVATLRYAFTPTESKRYTLTVDMTTDHGTEHNDVWVEIANVPFTLVQGSKTRPGAAGMNKAYHNKNGRSKTVYTVDFDGHVFSTRDALEAGKRYEVKVGGRSTKVVLHGVILFPCSDFSCAHGGKWNAALNSC 359
The following BLAST results are available for this feature:
BLAST of Gchil9186.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR85_9FLOR5.650e-9949.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..340
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2346995..2348017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9186.t1Gchil9186.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2346995..2348017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9186.t1 ID=Gchil9186.t1|Name=Gchil9186.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=341bp
MHSSAFALALALFAALAHGQRLQIYQASVPGPISGWSAGPVLPPKITLCA
NDLPSPFTVVCIPDEGMSASSAKFYLNSVVVRTERQLPYVITGDMSSKGA
FPWNNPPTVSEITCMLSGGQTVTSTILFSCDDDTETPTTDAPPTTMPPTT
MPAAPPAAAAPRSSGTSACVYIPATGYESKTGAWMEGGGGMEYKFSDSTT
KVDRAGLATMTYSFVAPLTARYGVTVDMLTSHGTEHNDIWLEVDGVPFTL
VKKGSSQDGKSGMNKAYHNNNGRSKLVYTVDFNAHVFSTKPALEAGASYV
VNIGGRSTKIRVYAIILFPCDAFGCAPGNQWNSAVNTCSA*
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