Gchil9162.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9162.t1
Unique NameGchil9162.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length415
Homology
BLAST of Gchil9162.t1 vs. uniprot
Match: A0A2V3IT12_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT12_9FLOR)

HSP 1 Score: 478 bits (1230), Expect = 8.050e-164
Identity = 232/393 (59.03%), Postives = 301/393 (76.59%), Query Frame = 0
Query:    1 MHPRLNGISFRIHAMTSSSTSSCVWAGPKATCSFNQLHDFAASFAKRGYRFALSGAFLDTPERRCRLQPSAPQLDSAMMIFGPNILAPAKSAFEQLTRPFRSGTWIALSVVTFFFAVIGMVIAVIVANRLSHTVYILMGHRDKLQDYNSRRLASSLAFLRGAMSSFAAICYFFYSASVVNFLFAQSHVDMSHTLSSLRVSDLSHYAVLKDSALEQVWVDAVNPSGYKFNSSDPSSFPWKRCLSGKECMEWAFRGTHDVQFAVTYKMLGNHFVHVLTDCNVLTEWPSRQPLPSFNIGWLYNREVTDTERMAINREIVGLRINGTISNLISRTKGDASCSEETAHAIGILVVLIPLAVLVFPLGIVGLSLIAWAEFERLKCEKRHIMETERDQVL 393
            +HP L GI+F +HA+TSS+ SSC++AG K+ CSFNQLHDFA  +A+ G+RFA+SGA++DTPERRC L PSAP +DS+MMI G NI +PA +A EQ+TRPFR+GTW+ L  VT  F ++G+ IA IVA +LS  VY+L G +++LQD NS+RLASSL+ LR A+SSF AI Y FY A+VVNFLFAQS+V M+ +++ LRVSDLSHYAVLKDSALE VW  +V+P   K++S++ +++PWKRC SGKEC+EW ++GT++VQFAVTY +LGNHF+H L DC++LTEW S+QPL +FNIGWL+NR +   E++ INR+IVGLRI GTI   +SR KGDA+C E     IG LVVLIP+ + V PL   GL L+AWAE  R K  +      E   VL
Sbjct:   90 LHPGLEGIAFEVHALTSSARSSCIFAGQKSQCSFNQLHDFAVWYAQYGFRFAVSGAWIDTPERRCHLTPSAPLVDSSMMIVGANIASPATNALEQVTRPFRTGTWVVLLGVTLSFVLVGIAIAGIVAKKLSKAVYVLTGLKERLQDVNSKRLASSLSMLRAAVSSFGAIVYLFYGAAVVNFLFAQSNVHMTKSVAGLRVSDLSHYAVLKDSALEYVWDASVDPMRRKYDSNESTNYPWKRCSSGKECIEWVYKGTNNVQFAVTYGVLGNHFIHELADCHILTEWRSKQPLATFNIGWLFNRAIPMDEQLEINRQIVGLRIRGTIGEFVSRRKGDATCEEVAVSTIGSLVVLIPIGIFVLPLAAAGLFLVAWAEVWRWKAGRERKAAQEGPGVL 482          
BLAST of Gchil9162.t1 vs. uniprot
Match: A0A2V3J388_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J388_9FLOR)

HSP 1 Score: 224 bits (570), Expect = 1.730e-63
Identity = 133/436 (30.50%), Postives = 221/436 (50.69%), Query Frame = 0
Query:    2 HPRLNGISFRIHAMTSSSTSSCVWAGPKATCSFNQLHDFAASFAKRGYRFALSGAFLDTPERRCRLQPSAPQLDSAMMIFGPNILAPAK--SAFEQLTRPFRSGTWIALSVVTFFFAVIGMVIAVIV----ANRLSHTVYILMGHRDKL-----------------------------------------------------------QDYNSR-RLASSLAFLRGAMSSFAAICYFFYSASVVNFLFAQSHVDMSHTLSSLRVSDLSHYAVLKDSALEQVWVDAVNPSGYKFNSSDPSSFPWKRCLSGKECMEWAFRGTHDVQFAVTYKMLGNHFVHVLTDCNVLTEWPSRQPLPSFNIGWLYNREVTDTERMAINREIVGLRINGTISNLISRTKGDASCSEETAHAIGILVVLIPLAVLVFPLGIVGLSLIAW 371
            HP L G +  +H  TS+    CVWAG  + C++N L DF  + A+RGY+FA++G  L+T +R+C    S P LD+ M+I G N     +      QL +PF  GTWI + VV     ++  ++  +     +N L     +L+G R++                                                            + Y S+  +A+SL   R A+  FA + + FY A+VV FLF Q  ++++ ++++L   +L  +AV+ DSALE +W+  V+P G + +  +  + PWKRC   ++C+     GT  V+F VTY++ G+  +H L+DC+ LT + + + L  FN GWL N  V   +R   +RE+V LRING++S L+++   D  C  +   +IG ++++IP+ VLV P  I+ ++++ W
Sbjct:  182 HPSLAGYAIELHKRTSTRNEYCVWAGNPSECTWNGLVDFTGAMARRGYQFAITGPMLETAQRKCEHYSSGPWLDNPMIIIGRNEPPAIRLGDQISQLVKPFSPGTWITICVVLLLIVILSFILVNVFHVSGSNSLFTAYMLLIGDREQALLFGRSHGKRKKGRRKSCFNMFWLSRRSTKNPNASEIRQSNASSRSESEVCSIDLVAETEQYRSQYNVATSL--FRFALICFAGLFFLFYEAAVVQFLFHQRRIEITKSVTTLSDEELRSFAVMGDSALEDIWLATVDPGGSRVDWKNKMNLPWKRCSKTEDCIRMVKDGTDGVRFTVTYEVEGSFLIHELSDCDHLTRFDTTESLHYFNGGWLMNSLVDHEKRRQFDRELVALRINGSVSQLLNQY-ADHYCKRDNIVSIGPIILVIPIIVLVLPPLILSVAVVFW 614          
BLAST of Gchil9162.t1 vs. uniprot
Match: A0A2V3IE21_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE21_9FLOR)

HSP 1 Score: 222 bits (565), Expect = 2.070e-63
Identity = 130/417 (31.18%), Postives = 213/417 (51.08%), Query Frame = 0
Query:    1 MHPRLNGISFRIHAMTSSSTSSCVWAGPKATCSFNQLHDFAASFAKRGYRFALSGAFLDTPERRCRLQPSAPQLDSAMMIFGPNILAPAKSA--FEQLTRPFRSGTWIALSVVTFFFAVIG--------------MVIAVIV-------------------------------------ANRLSHTVYILM--GHRDKLQDYNSRRLASSLAF--LRGAMSSFAAICYFFYSASVVNFLFAQSHVDMSHTLSSLRVSDLSHYAVLKDSALEQVWVDAVNPSGYKFNSSDPSSFPWKRCLSGKECMEWAFRGTHDVQFAVTYKMLGNHFVHVLTDCNVLTEWPSRQPLPSFNIGWLYNREVTDTERMAINREIVGLRINGTISNLISRTKGDASCSEETAHAIGILVVLIPLAVLVFP 360
            +HP L GI F +H  TSS    C WAG  + C++N L DF    A RGYRF +SG  L+TP+R+C  Q S P LDS M+I G N      S    +QLT+PF + +W+ L +  F + ++G              +V A+ +                                      +R + TV++ +  GH  + +      L  SLA   +R +   F A+   FY  S+VNF+F Q ++ +   + SL  ++L+ ++++K+SALE +W   VNP G K++ ++ +  PWKRC +  +C++W   G + V+F V+Y++   + +  +  C  L  + +R+ L +FN GWLYN  V +  R   +REIV LRI+GT++ + + +  D +C E     +  L+++IP+ + V P
Sbjct:  112 LHPSLGGIVFELHKKTSSRDDFCTWAGHPSECTWNALVDFVHVMAGRGYRFVVSGPMLETPQRKCYHQASGPWLDSRMVIIGRNSPEDVVSTNPLKQLTQPFETLSWVTLVLFLFVYLLLGIGIVNRIRRRRNVSLVTALFIFTGDLEHAIKHETCPQPPRAERENDSIESGDGSTSDGTSRTASTVHVSVSNGHLGEQRRRRISFLRYSLAINLIRVSFLFFVALFVMFYELSLVNFVFQQQNLHIKKDVDSLSPNELNKFSIMKNSALENIWNRTVNPHGLKYDGTNDTQIPWKRCRNALQCIDWTLNGKYGVKFTVSYELQAQNALQTIASCEELVFFETRRNLHTFNSGWLYNSAVPENIRKRYDREIVALRIDGTLTRIYN-SYVDFTCEERRTLKVKSLIIVIPILIFVLP 527          
BLAST of Gchil9162.t1 vs. uniprot
Match: A0A2V3IQ92_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ92_9FLOR)

HSP 1 Score: 221 bits (562), Expect = 1.140e-62
Identity = 143/422 (33.89%), Postives = 210/422 (49.76%), Query Frame = 0
Query:    5 LNGISFRIHAMTSSSTSSCVWAGPKATCSFNQLHDFAASFAKRGYRFALSGAFLDTPERRCRLQPSAPQLDSAMMIFGPNILAPA--KSAFEQLTRPFRSGTWIALSVVTFFFAVIGMVIAV----IVANRLSHTVYILMGHRDKLQDYNSR--------------RLASSLAFLRGAMSSFAAICYFFYSASVVNFLFAQSHVDMSHTLSSLRVSDLSHYAVLKDSALEQVWVDAVNPSGYKFNSSDPSSFPWKRCLSGKECMEWAFRGTHDVQFAVTYKMLGNHFVHVLTDCNVLTEWPSRQPLPSFNIGWLYNREVTDTERMAINREIVGLRINGTISNLISRTKGDASCSEETAHAIGILVVLIPLAVLVFP-LGIVGLSLIAWAEFERLKCEKRHIMETERDQVLPSAIGGTPHDSN 405
            + GI+F  H +TSS    C+W G    C FNQL D+    A  GYRFA++G  L+ P R+C   PSA   DSA++I G    +    +  FEQL RPF  G W     V   F ++   IAV         L    +I  G RD+   + +               +   ++   R A+ +  AI   FY  +VVNFLF Q +  +S  +  L ++DL H++VL+ SALE VW +A   +G K N  +    PW+RC +  EC++W   G     + VT++++G H +   T+C+ LT + ++  L  FN GWLYN+ V++  RM ++RE+VGLRI+G    L+     + +C E     IG  ++LIP  + V P L    L L+ W      K  +R         VLPS+     HDSN
Sbjct:  118 IGGIAFETHKLTSSRNDLCMWGGHSDDCGFNQLVDYTHLMADEGYRFAVTGLLLELPSRQCFHHPSAALTDSAVIIVGQKDASNGVVQGPFEQLIRPFDWGAWGIFGGVLILFIIVCFTIAVRFHWFRGRSLITAFFIFAGERDEAMAHEANVNHHNNDDAMAFATKYGLAMTLFRMALLALIAIFALFYEVAVVNFLFQQQNQSLSKPVKRLPLADLKHFSVLRGSALENVW-NATVLAGRKDNWGN--DLPWQRCPTATECVDWTKEG--KTTYMVTFEIVGKHLLAQKTECSELTVFKTKDVLYHFNGGWLYNKAVSEERRMQVDRELVGLRIDGQSRKLVDSYLDEYTCEENIVLTIGPTIILIPCLIFVLPPLACSVLVLVLW------KKRRRRESGAVGHGVLPSSA----HDSN 524          
BLAST of Gchil9162.t1 vs. uniprot
Match: A0A2V3J4B8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4B8_9FLOR)

HSP 1 Score: 165 bits (418), Expect = 4.890e-42
Identity = 79/233 (33.91%), Postives = 132/233 (56.65%), Query Frame = 0
Query:  128 NRLSHTVYILMGHRDKLQDYNSRRLASSLAFLRGAMSSFAAICYFFYSASVVNFLFAQSHVDMSHTLSSLRVSDLSHYAVLKDSALEQVWVDAVNPSGYKFNSSDPSSFPWKRCLSGKECMEWAFRGTHDVQFAVTYKMLGNHFVHVLTDCNVLTEWPSRQPLPSFNIGWLYNREVTDTERMAINREIVGLRINGTISNLISRTKGDASCSEETAHAIGILVVLIPLAVLVFP 360
            N+L H V   +     + D    + + + +  R ++ +F A+   FY  +VVNFLF Q  +++  ++  L   +L  Y VLKD+ LE +W + VNP+G KF+ SD    PWKRC+  +EC++W     + VQF V+Y+M G + +H  T+C  +  + +R+ L  FN GWL+N  V +  R  ++RE++ LR+NG ++ L +       C  +   +I  L++L+P+ VLV P
Sbjct:  318 NKLDHVVGNSIDEESCIDDSFLTKFSLATSLFRISLIAFIAMFSLFYEVAVVNFLFQQQRIEIPKSIGQLSTLELRQYCVLKDTGLENIWNNTVNPTGRKFDGSDEKEIPWKRCVHAQECLDWVLDDDNPVQFFVSYEMEGRYLMHSRTNCEAVAIYETRETLHQFNSGWLFNERVPEKRRRELDRELMALRLNGRLTQLHNGV--GPRCQPDVISSIDYLILLLPVMVLVVP 548          
BLAST of Gchil9162.t1 vs. uniprot
Match: A0A2V3J310_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J310_9FLOR)

HSP 1 Score: 164 bits (415), Expect = 1.210e-41
Identity = 79/233 (33.91%), Postives = 129/233 (55.36%), Query Frame = 0
Query:  128 NRLSHTVYILMGHRDKLQDYNSRRLASSLAFLRGAMSSFAAICYFFYSASVVNFLFAQSHVDMSHTLSSLRVSDLSHYAVLKDSALEQVWVDAVNPSGYKFNSSDPSSFPWKRCLSGKECMEWAFRGTHDVQFAVTYKMLGNHFVHVLTDCNVLTEWPSRQPLPSFNIGWLYNREVTDTERMAINREIVGLRINGTISNLISRTKGDASCSEETAHAIGILVVLIPLAVLVFP 360
            N+L H V   +     + D    + + + +  R ++ +F A+   FY  +VVNFLF Q  +++  ++  L   +L  Y VLKD+ LE +W + VNP+G KF+ SD    PWKRC+  +EC++W     + VQF V+Y+M G + +H  T+C  +  + +R+ L  FN GWL+N  V    R  + RE+V L++NG ++ L++       C  E   +I   V+L+P+  LV P
Sbjct:  317 NKLDHVVGNSIDEESCIDDSFLTKFSLATSLFRISLIAFIAMFSLFYEVAVVNFLFQQQRIEIPKSIGQLSTLELRQYCVLKDTGLENIWNNTVNPNGIKFDGSDEKEIPWKRCVHAQECLDWVLDDDNPVQFFVSYEMEGRYLMHSRTNCEAVAIYETRETLHQFNSGWLFNERVPRKRRRELGRELVTLKVNGRLTQLLNSL--GPRCKPEVTSSINFPVLLVPILFLVVP 547          
The following BLAST results are available for this feature:
BLAST of Gchil9162.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IT12_9FLOR8.050e-16459.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J388_9FLOR1.730e-6330.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IE21_9FLOR2.070e-6331.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQ92_9FLOR1.140e-6233.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4B8_9FLOR4.890e-4233.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J310_9FLOR1.210e-4133.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 345..372
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 373..414
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 175..344
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..23
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 162..184
NoneNo IPR availableTMHMMTMhelixcoord: 347..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2137327..2138690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9162.t1Gchil9162.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2137327..2138690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9162.t1 ID=Gchil9162.t1|Name=Gchil9162.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=415bp
MHPRLNGISFRIHAMTSSSTSSCVWAGPKATCSFNQLHDFAASFAKRGYR
FALSGAFLDTPERRCRLQPSAPQLDSAMMIFGPNILAPAKSAFEQLTRPF
RSGTWIALSVVTFFFAVIGMVIAVIVANRLSHTVYILMGHRDKLQDYNSR
RLASSLAFLRGAMSSFAAICYFFYSASVVNFLFAQSHVDMSHTLSSLRVS
DLSHYAVLKDSALEQVWVDAVNPSGYKFNSSDPSSFPWKRCLSGKECMEW
AFRGTHDVQFAVTYKMLGNHFVHVLTDCNVLTEWPSRQPLPSFNIGWLYN
REVTDTERMAINREIVGLRINGTISNLISRTKGDASCSEETAHAIGILVV
LIPLAVLVFPLGIVGLSLIAWAEFERLKCEKRHIMETERDQVLPSAIGGT
PHDSNLTRAVEQAT*
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