Gchil916.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil916.t1
Unique NameGchil916.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length462
Homology
BLAST of Gchil916.t1 vs. uniprot
Match: A0A2V3IMD5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD5_9FLOR)

HSP 1 Score: 409 bits (1052), Expect = 1.330e-136
Identity = 207/429 (48.25%), Postives = 284/429 (66.20%), Query Frame = 0
Query:    1 MQEKPISFKNEQVFANNGIDGVIADHVLQMKSYLNWSCSTTVLFKETGSSDFNAFVDNLYKCT-NKSTGQIIDSPECFCDIGLGGWFQTPGRFPKVDFLPPIVFDSYIVFAHISSATVSGKMWFFLLTFDAMAWVCIVALVFMFAFLKTLDSRFSVAPLYSPLPNTCSKFQRYSHFFMKSPLLYRCRKAFQSALTRMLLLSDDRVVENGNATRQWLLNLFISVCALFLILSYEASMTASLVQESFSSQYQSVSDFQSCRVKPSDICIIKGGALETFWNNSIAINACHENEKPQFKNSYPELFQAVQDSRCIYGITMESILNNAIRETYCGTFVSLGEALSTGGLSMLLPKHSNLTEPMSLGVLDLLQNQTKTYLNKYFNTLPHCRADVNTNLSFNKLRLFFFLAFGFGLVIFLEMLFGPQQLSSKQDSK 428
            M E PISF N++ F+NNGIDG ++++V +++ +L W CS+  LF+   +S FNAF++ +++CT N+STG  + S  C CDIG+GGWFQ   R+ KVDFLPP V D Y V  H+S+   SG+M FFL TFD+++W+ IVAL  +F  LK LDSRF+VA  Y+PL    S+ +R  HF  K P LYR RKA QS++TR++L  D+ VV+NG +TRQW LNL I +CALFL+LS+EASMTASLVQE  +S Y+S  DF+SC++ PSD+C ++GGALE FWN +IA + CH     Q+ ++Y E++  +   +C + I +ES++   IR   CG  V L E L T GLSM++PK SNLTE MS   + LL +Q  ++L  +    P C   V + L+F KL+LFF LAF     I   ML G      K  +K
Sbjct:    1 MHEAPISFINDRKFSNNGIDGAVSEYVSELQGFLGWRCSSVTLFQHQNTSGFNAFIEQMHECTTNQSTG--VSSNSCPCDIGIGGWFQNQFRYGKVDFLPPFVHDRYRVATHVSNTDASGEMPFFLKTFDSLSWITIVALTCIFTLLKLLDSRFAVAEPYTPLSGV-SRIRRCLHFLWKHPRLYRLRKAGQSSVTRLMLQPDNEVVDNGKSTRQWFLNLVIGICALFLVLSFEASMTASLVQEKITSTYESPEDFRSCKIPPSDVCALRGGALEMFWNTNIATSNCHNGNPIQYLSTYEEIYDGLASGKCKFSICLESVITTQIRTQSCGQLVLLEEPLYTSGLSMVVPKGSNLTEAMSKATMTLLLSQPSSFLESFLRKWPKCTKKVASTLTFRKLKLFFILAFSVCAAILFVMLLGSLYPVKKSANK 426          
BLAST of Gchil916.t1 vs. uniprot
Match: A0A2V3IME4_9FLOR (Glutamate receptor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME4_9FLOR)

HSP 1 Score: 379 bits (973), Expect = 4.390e-124
Identity = 195/440 (44.32%), Postives = 274/440 (62.27%), Query Frame = 0
Query:    1 MQEKPISFKNEQVFANNGIDGVIADHVLQMKSYLNWSCSTTVLFKETGSSDFNAFVDNLYKCTNKSTGQIIDSPECFCDIGLGGWFQTPGRFPKVDFLPPIVFDSYIVFAHISSATVSGKMWFFLLTFDAMAWVCIVALVFMFAFLKTLDSRFSVAPLYSPLPNTCSKFQRYSHFFMKSPLLYRCRKAFQSALTRMLLLSDDRVVENGNATRQWLLNLFISVCALFLILSYEASMTASLVQESFSSQYQSVSDFQSCRVKPSDICIIKGGALETFWNNSIAINACHENEKPQFKNSYPELFQAVQDSRCIYGITMESILNNAIRETYCGTFVSLGEALSTGGLSMLLPKHSNLTEPMSLGVLDLLQNQTKTYLNKYFNTLPHCRADVNTNLSFNKLRLFFFLAFGFGLVIFLEMLFG-------PQQLSSKQDSKVSCLK 433
            + E PI+F +++ +AN G+ G+IA ++ +M+ YLNWSCS+   +     + FN FV  +  C+    G + + P C CDIG+ GWFQ   RF +VDFLPP V D Y V  HIS++ VSG+  FF+ TFD +AWV I  L+ +F+ +K  D +F     +  L  T  + QR+ H  MK P LYR R+A QS  +RM+LL D  VVEN  A RQW+LN  ISV  LFLILSYEASMTASLVQE+ S+ +QS+ DFQ+CR+ P+++C+  GGALE FWN SIAI  CH+  +P F +SY ELF AV +  C YG+ +ES  N AI   YCG  ++  + + +GGL+M+LPK+SNLT+ MS   L +        + +YF ++P C  +  T L+F KLRLFF +A   G  + L  +          +++  K+ SK+  +K
Sbjct:   42 LDEPPIAFIDDRTYANGGVSGIIAQYLREMQGYLNWSCSSVQHYTGGKQTSFNHFVRMMEDCSEN--GAVRNDPGCTCDIGISGWFQNHHRFRRVDFLPPFVTDGYEVVFHISNSEVSGRRMFFITTFDRLAWVSIFGLMLLFSAIKFFDRKFCPIDSFEALEETNPRIQRFVHVLMKYPTLYRFRRALQSTFSRMILLPDSDVVENQTANRQWVLNTVISVSGLFLILSYEASMTASLVQETVSAGFQSIQDFQTCRISPAEVCLPGGGALEMFWNTSIAIEVCHKQRQPFFASSYDELFHAVDNRTCKYGLLLESTANAAINSKYCGKLLAAEKPIYSGGLAMVLPKNSNLTDVMSYATLKITNEVATPGIEQYFASIPKCSINPETTLNFRKLRLFFGIALCTGAFLLLLRIINNVWNQAIERRVEDKEQSKLRDIK 479          
BLAST of Gchil916.t1 vs. uniprot
Match: A0A2V3IMD4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD4_9FLOR)

HSP 1 Score: 349 bits (895), Expect = 1.640e-111
Identity = 173/403 (42.93%), Postives = 255/403 (63.28%), Query Frame = 0
Query:    3 EKPISFKNEQVFANNGIDGVIADHVLQMKSYLNWSCSTTVLFKETGSSDFNAFVDNLYKCTNKSTGQIIDSPECFCDIGLGGWFQTPGRFPKVDFLPPIVFDSYIVFAHISSATVSGKMWFFLLTFDAMAWVCIVALVFMFAFLKTLDSRFSVAPLYSPLPNTCSKFQRYSHFFMKSPLLYRCRKAFQSALTRMLLLSDDRVVENGNATRQWLLNLFISVCALFLILSYEASMTASLVQESFSSQYQSVSDFQSCRVKPSDICIIKGGALETFWNNSIAINA-CHENEKPQFKNSYPELFQAVQDSRCIYGITMESILNNAIRETYCGTFVSLGEALSTGGLSMLLPKHSNLTEPMSLGVLDLLQNQTKTYLNKYFNTLPHCRADVNTNLSFNKLRLFFFLAF 404
            E PI+F N++ +AN GIDG+IA+++ QM+ +LNW+CS+   + +  ++ FN F+  + +C+    G I D P C CDIG+GGWF    RF +VDFLPP V+DSY V  HIS + VSG+  FF+ TFD+  W+CI  LV +FA ++ + S F     Y PL  T +  +R +HF    P  YR R + Q   +RM+L+ +       N T  W+L   +++C LFLIL+YEASMTAS+VQE+ +S++QS  DFQ+CR+ P D+C+ +GG+ +T+W   +A    CH+   P    SY E+FQ V++  C +GI +ES +++ I   YCGT +S G  + TGGL+M+LPK S  TE MSL  L +    T   L ++++T   C A++ T+L F KL+LFF +AF
Sbjct:   44 EPPIAFLNDRNYANLGIDGIIANYLNQMQGFLNWTCSSVQRYSDGSTTGFNNFITMMERCSEN--GTIKDDPHCKCDIGIGGWFTNSKRFGRVDFLPPFVYDSYQVIFHISDSKVSGRSPFFITTFDSRGWLCIFGLVLLFATIR-MFSAFGDHARYQPLEPTVTPIRRIAHFLYNHPFFYRLRISIQRIFSRMILMPEPEDFSRPNNTFLWILKTVVTICGLFLILAYEASMTASIVQETVTSEFQSGKDFQTCRIDPKDVCLPRGGSFDTYWTEVLAKERPCHKGRSPHLMTSYEEVFQGVENRTCRFGILLESTVHSTIHRKYCGTILSNGNPIYTGGLAMVLPKDSMHTEVMSLATLKITDAATVPSLEEFYSTTGSCSAELATSLPFQKLQLFFIIAF 443          
BLAST of Gchil916.t1 vs. uniprot
Match: A0A2V3IUK7_9FLOR (Glutamate receptor ionotropic, NMDA 2C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUK7_9FLOR)

HSP 1 Score: 310 bits (793), Expect = 3.080e-97
Identity = 161/405 (39.75%), Postives = 240/405 (59.26%), Query Frame = 0
Query:    1 MQEKPISFKNEQVFANNGIDGVIADHVLQMKSYLNWSCSTTVLFKETGSSDFNAFVDNLYKCTNKSTGQIIDSPECFCDIGLGGWFQTPGRFPKVDFLPPIVFDSYIVFAHISSATVSGKMWFFLLTFDAMAWVCIVALVFMFAFLKTLDSRFSVAPLYSPLPNTCSKFQRYSHFFMKSPLLYRCRKAFQSALTRMLLLSDDRVVENGNATRQWLLNLFISVCALFLILSYEASMTASLVQESFSSQYQSVSDFQSCRVKPSDICIIKGGALETFWNNSIAINACHENEKPQ--FKNSYPELFQAVQDSRCIYGITMESILNNAIRETYCGTFVSLGEALSTGGLSMLLPKHSNLTEPMSLGVLDLLQNQTKTYLNKYFNTLPHCRADVNTNLSFNKLRLFFFLA 403
            + E PI + +   ++NNGI+G+I  ++ +M++ L+W CS  + + E   + FN F+D +  CT    G I D P C C+IG+GGWF +  R  +VD LPP V+D   V  H+S+   SG   FF+ TFD  +W+C+ A++ +FA  K LD RF+  P  +  PN  + + R  HF   +    R   + +S   R++L SD  +V+N +    + LNL I +  L ++LSYEASMTA+LVQE+  S YQSV D ++CR+KP D+C+  G A+ TFWN++IA   CH   K +  F+ S+ E   AV++  C +G+ ++S +  AI   YCG  +S GE + TGGLSM+LPK+SNLT+ M L  L L    +   L +YF T+  C     + L+F KL+L F  A
Sbjct:   40 IHEPPIVYLDPNTYSNNGINGIITKYLTEMQALLDWQCSEFIPYVEGDGTSFNRFIDMMDNCTQN--GAIKDDPACRCEIGIGGWFNSADRDERVDLLPPFVYDGIRVTFHVSNTRRSGSKLFFVTTFDLRSWLCLFAIIILFALAKFLDERFAPIPS-ADEPNAANSWGRCLHFLRTN--WNRLITSIRSTTLRIVLQSDHDIVQNQHGAHNFNLNLIIGIFGLLVVLSYEASMTATLVQETVVSDYQSVEDLKTCRIKPEDVCVPGGSAVLTFWNDAIAYGDCHRESKGKNYFRGSFEETLDAVKNGTCKFGLVLDSTIQEAIHGKYCGQLLSSGEPIYTGGLSMILPKNSNLTKAMRLATLKLRNEASAPSLQQYFQTMSKCAPITGSVLTFEKLQLLFVFA 439          
BLAST of Gchil916.t1 vs. uniprot
Match: R7Q0P8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q0P8_CHOCR)

HSP 1 Score: 144 bits (364), Expect = 2.310e-36
Identity = 78/190 (41.05%), Postives = 116/190 (61.05%), Query Frame = 0
Query:   49 SSDFNAFVDNLYKCTNKSTGQIIDSPECFCDIGLGGWFQTPGRFPKVDFLPPIVFDSYIVFAHISSATVSGKMWFFLLTFDAMAWVCIVALVFMFAFLKTLDSRFSVAP--LYSPLPNTCSKFQRYSHFFMKSPLLYRCRKAFQSALTRMLLLSDDRVVENGNATRQWLLNLFISVCALFLILSYEASMT 236
            S  FN+ V+ + +C  +  G + + P+C CD+ +GGW ++  R  KVDFLPP + D   +  H+   +V+    FFL  F    W  +V L  +F FLK LD RF V P   Y+PLP +  + +R  H+ +KS + YR RKA QS L+RM+  S+   V +  ++RQW+LNL I+ C+LF+IL+YE+SMT
Sbjct:   90 SVPFNSIVEKMDRCVTEE-GTMREDPDCNCDMAVGGWMESDTRLGKVDFLPPFLIDGIGIATHVDETSVASAGAFFLTAFSLAVWGLVVMLSVVFTFLKMLDRRF-VPPDDSYTPLPASEPRLRRIRHYLLKSRIPYRLRKALQSTLSRMVGFSNSDPVTDKESSRQWVLNLVIACCSLFIILAYESSMT 277          
BLAST of Gchil916.t1 vs. uniprot
Match: R7QE12_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE12_CHOCR)

HSP 1 Score: 133 bits (334), Expect = 1.800e-33
Identity = 72/159 (45.28%), Postives = 98/159 (61.64%), Query Frame = 0
Query:   80 IGLGGWFQTPGRFPKVDFLPPIVFDSYIVFAHISSATVSGKMWFFLLTFDAMAWVCIVALVFMFAFLKTLDSRFSVAP--LYSPLPNTCSKFQRYSHFFMKSPLLYRCRKAFQSALTRMLLLSDDRVVENGNATRQWLLNLFISVCALFLILSYEASMT 236
            + +GGWF+ P RF +VDFLPP   D   +  H  + + +    FF+  F    W  IV LV +F FLK LD RF V P   Y PLP T S+ +R  H+ +KS + YR RKA QS L+RM+       +E   ++RQW+LNL I++C+LFLIL+YEA+MT
Sbjct:    1 MAVGGWFRNPERFRRVDFLPPFAIDGLSIVVHTDNTSSASAGAFFITAFSTTVWFFIVGLVCVFTFLKMLDRRF-VPPDESYQPLPRTSSRVRRMKHYLLKSRIPYRLRKALQSTLSRMVGQGGYDPIEGKTSSRQWVLNLLIALCSLFLILTYEAAMT 158          
BLAST of Gchil916.t1 vs. uniprot
Match: R7Q540_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q540_CHOCR)

HSP 1 Score: 132 bits (332), Expect = 1.420e-32
Identity = 72/194 (37.11%), Postives = 111/194 (57.22%), Query Frame = 0
Query:  236 TASLVQESFSSQYQSVSDFQSCRVKPSDICIIKGGALETFWNNSIAINACHENEKPQFKNSYPELFQAVQDSRCIYGITMESILNNAIRETYCGTFVSLGEALSTGGLSMLLPKHSNLTEPMSLGVLDLLQNQTKTYLNKYFNTLPHCRADVNTNLSFNKLRLFFFLAFGFGLVIFLEMLFGPQQLSSKQDSKV 429
            +A+LVQ++ SS+Y+ + D ++C V+PSD+C+ KGGA++ FW N+I  NACH+ EKP + + Y +    +   +C+Y +T+ S  N   +  YCG  +  GE     GLS +LP+ SN+T  +S   + L          +Y      C  + N  L+  KLR FF++AF   L IFLEM+   QQ  S + SK+
Sbjct:   10 SAALVQDTLSSRYRGLQDLKTCNVRPSDVCVPKGGAIDLFWINTIGKNACHK-EKPVYFSRYKDGIDNLLTKKCLYMLTLSSSGNELTQREYCGRLLVTGEPALRTGLSFVLPRGSNMTSHLSEKTVFLTDAGVLPTPERYLRATGKC-PEQNLTLNVEKLRFFFYMAFSACLFIFLEMILDSQQPPSLEASKL 201          
BLAST of Gchil916.t1 vs. uniprot
Match: R7Q656_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q656_CHOCR)

HSP 1 Score: 79.7 bits (195), Expect = 8.770e-15
Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 0
Query:  149 LDSRFSVAP--LYSPLPNTCSKFQRYSHFFMKSPLLYRCRKAFQSALTRMLLLSDDRVVENGNATRQWLLNLFISVCALFLILSYEASMT 236
            LD RF V P   Y PLP T S+ +R  H+ +KS + YR RKA QS ++RM+       +E   ++RQW+LNL I++C+LFLIL+YE++MT
Sbjct:    2 LDRRF-VPPDESYQPLPRTSSRVRRMKHYLLKSRIPYRLRKALQSTMSRMVGQGGYDPIEGKTSSRQWVLNLLIALCSLFLILTYESAMT 90          
The following BLAST results are available for this feature:
BLAST of Gchil916.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IMD5_9FLOR1.330e-13648.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IME4_9FLOR4.390e-12444.32Glutamate receptor 1 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IMD4_9FLOR1.640e-11142.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUK7_9FLOR3.080e-9739.75Glutamate receptor ionotropic, NMDA 2C n=1 Tax=Gra... [more]
R7Q0P8_CHOCR2.310e-3641.05Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QE12_CHOCR1.800e-3345.28Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q540_CHOCR1.420e-3237.11Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q656_CHOCR8.770e-1547.78Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 118..283
e-value: 3.9E-6
score: 28.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..461
NoneNo IPR availablePANTHERPTHR18966IONOTROPIC GLUTAMATE RECEPTORcoord: 54..413
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 214..231
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 398..417
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 418..461
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..146
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 232..397
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 78..379
NoneNo IPR availableTMHMMTMhelixcoord: 214..231
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 398..417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:1385217..1386984 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil916.t1Gchil916.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 1385217..1386984 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil916.t1 ID=Gchil916.t1|Name=Gchil916.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=462bp
MQEKPISFKNEQVFANNGIDGVIADHVLQMKSYLNWSCSTTVLFKETGSS
DFNAFVDNLYKCTNKSTGQIIDSPECFCDIGLGGWFQTPGRFPKVDFLPP
IVFDSYIVFAHISSATVSGKMWFFLLTFDAMAWVCIVALVFMFAFLKTLD
SRFSVAPLYSPLPNTCSKFQRYSHFFMKSPLLYRCRKAFQSALTRMLLLS
DDRVVENGNATRQWLLNLFISVCALFLILSYEASMTASLVQESFSSQYQS
VSDFQSCRVKPSDICIIKGGALETFWNNSIAINACHENEKPQFKNSYPEL
FQAVQDSRCIYGITMESILNNAIRETYCGTFVSLGEALSTGGLSMLLPKH
SNLTEPMSLGVLDLLQNQTKTYLNKYFNTLPHCRADVNTNLSFNKLRLFF
FLAFGFGLVIFLEMLFGPQQLSSKQDSKVSCLKENQVTQTKNDSIDRNRS
PSLSTASQDTN*
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