Gchil9152.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9152.t1
Unique NameGchil9152.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length352
Homology
BLAST of Gchil9152.t1 vs. uniprot
Match: A0A2V3ITP5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITP5_9FLOR)

HSP 1 Score: 396 bits (1018), Expect = 9.790e-135
Identity = 204/355 (57.46%), Postives = 257/355 (72.39%), Query Frame = 0
Query:    1 MVSTVRRRALATSSNSDFCPSIASPSHKSFPISSRAI----CILSILLTASLFSIHQIIRYNRSDPITIKLLAPNATSDDEESLSFSRIQADDYVHPNFRARGAACMPSVTRIKGGIPVEYVSNAVKSWRLATNQSLDVRQLTVFDMDLQPAARPSWLDNVFDTALTDLPSWLKLSKRERPPIPHRKVTLGDDERRVEWRSKEALDYADVLLRCMEENDVEYIIVVQDDVLFREQMKNVIQWCDKHLKESFVTNAQGRPKQIRMCSASLFDLSGGEADAHELRSSNMVARVWRRDFVQSMARYLTTNFDEAPVDWLADRRCRTQKRKTIVMEPNPVRHRGRISSFPSNLREKTIT 351
            MVS +RRRA ATSS+    P+ A+   +S  + +  +    CIL +L   +L  +  +   +RSD     +L  ++  DDE ++S + +  + Y  P F ARG ACMP+VTR++ G  VEYVSNAVKSWRLATN SLD+RQLTVFDMD  P A PSWL  VF     +LP+WL+L  R+    P RK TLGDDE+RV WRSKEALDYA+VL RC E  DV+YII+VQDDVLFR +M++V+ WCD+HL+++FVTNA GR K +R CSASLFDL+  + D HELRSSNMVARVW+R+ V+SM RY   NFDEAPVDWLADRRC+ Q+R+T+VMEPNPVRHRG +SSF +N RE TIT
Sbjct:    1 MVSALRRRANATSSD----PAEATSDSRSQRVRAADLSTPKCILPLLPPLTLVLLFLL--RSRSDSSVGNVLTSSSPCDDESTISSAVLPTESYTPPKFSARGVACMPTVTRMREGRQVEYVSNAVKSWRLATNASLDLRQLTVFDMDKHPTAEPSWLQKVFQPGFKELPTWLRLEVRDGKITPPRKFTLGDDEQRVHWRSKEALDYAEVLQRCAEGTDVDYIIIVQDDVLFRSEMQHVLHWCDEHLEDAFVTNANGRLKAVRKCSASLFDLTNEKEDGHELRSSNMVARVWKRETVESMVRYFRANFDEAPVDWLADRRCKNQRRRTVVMEPNPVRHRGSVSSFAANAREGTIT 349          
BLAST of Gchil9152.t1 vs. uniprot
Match: A0A5J4YRG9_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRG9_PORPP)

HSP 1 Score: 142 bits (358), Expect = 3.800e-36
Identity = 95/245 (38.78%), Postives = 128/245 (52.24%), Query Frame = 0
Query:  102 CMPSVTRIKGGIPVEYVSNAVKSWR----LATNQSLDVRQLTVFDMDLQPAARPSWLDNVFDTALTDLPSWLKLSKRERPPIPHRKVTLGDDERRVEWRSKEALDYADVLLRCMEEND-VEYIIVVQDDVLFREQMKNVIQWCDKHLKESFVTNAQGRPKQIRMCSASLFDLSGGEADAHELRSSNMVARVWRRDFVQSMARYLTTNFDEAPVDWLADRRCRTQKRKTIVMEPNPVRHRGRISSF 341
            C+P+V R  G   VEY+S+ + S      LA N+   +  +TV++M + PA         F++  +   +WL++  R  P   HR +T GD  RRV WRSKEA DY   L  CM EN  V Y  VVQDDV F E ++++  W         V     RP  +  CS SL+D         ELR+ NMVARVW R      A Y+   +D  PVDWLA   C+ +++ T VM PNP+ HRG IS+ 
Sbjct:   74 CIPTVARPGG---VEYLSSTLDSLAYQLDLAGNKPAWLDGVTVYNMHV-PAEEHVTPQRYFESKRSRR-AWLRVRIRNEPVREHRVMTHGDGIRRVVWRSKEAQDYELTLQMCMAENPHVTYFAVVQDDVEFNEGIRDLASW---------VAQRYSRPAAV--CSLSLYDEDSATPPNGELRADNMVARVWERSRAADFANYIYERYDVDPVDWLARSFCKRKRKPTRVMVPNPLSHRGEISTL 302          
The following BLAST results are available for this feature:
BLAST of Gchil9152.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITP5_9FLOR9.790e-13557.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4YRG9_PORPP3.800e-3638.78Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF04666Glyco_transf_54coord: 177..239
e-value: 9.2E-6
score: 24.7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 56..351
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2084040..2085095 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9152.t1Gchil9152.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2084040..2085095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9152.t1 ID=Gchil9152.t1|Name=Gchil9152.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=352bp
MVSTVRRRALATSSNSDFCPSIASPSHKSFPISSRAICILSILLTASLFS
IHQIIRYNRSDPITIKLLAPNATSDDEESLSFSRIQADDYVHPNFRARGA
ACMPSVTRIKGGIPVEYVSNAVKSWRLATNQSLDVRQLTVFDMDLQPAAR
PSWLDNVFDTALTDLPSWLKLSKRERPPIPHRKVTLGDDERRVEWRSKEA
LDYADVLLRCMEENDVEYIIVVQDDVLFREQMKNVIQWCDKHLKESFVTN
AQGRPKQIRMCSASLFDLSGGEADAHELRSSNMVARVWRRDFVQSMARYL
TTNFDEAPVDWLADRRCRTQKRKTIVMEPNPVRHRGRISSFPSNLREKTI
T*
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