Gchil914.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil914.t1
Unique NameGchil914.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length620
Homology
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BLAST of Gchil914.t1 vs. uniprot
Match: A0A2V3IN89_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN89_9FLOR)

HSP 1 Score: 154 bits (389), Expect = 3.960e-36
Identity = 168/615 (27.32%), Postives = 270/615 (43.90%), Query Frame = 0 
Query:   17 RFYEKAIKRHNDPLAMVNLADLLFSAKQKELHIP-RAVQLLQXXXXXXXXXXXXXXXALHYLRDGDNQQ----------RRLVIPLLERSLRIEEDSIVLRNLSDAVKDSRCGKP----DPEIAIQLXXXXXXXXXXXXXXXXXXXNLLTLKG--IXXXXXXXXXXXXXXXHLSNDASVMNCLGVCYVDGTYHLPASSTRAAKWFEKAIKAGNLPDAKCNLAYLLAGNNLPPSKRDPVRAVRLLEEAIQQVQSEVCLRTLAKIYRDVEQVSNLPRAIHLMETSLREHGTSFSRNFLLDIFL-GFKSAPADYARALRFCRDDYDRTDHIASFRVLVCIMWSGAVDVKANPPFAVELMKARSCEQLPEE----ASALRYE-----SETEDDVLKLVEQLS---GSFFFGTKLLIWAILLSELESESSLRHAEV--LFRTFMNDEEAKVMFAWLPLSLRVCRFTLPFHGDRKCMTYAMKRATHCYEASLLNLSSFLLEKGCDSSDEK--PETVKLLEEAMDTGLRVPAMLNLGYMLLTGVGGVPMNRGRAIDLFEICIEETDNACARALLANALVDGEKCAEEVIRKSLGLWQSVEEEYKDDEEEVSRMRWMISDRAK 597
            R  E+AI   NDP AM++L++LL          P RA+QLLQ                LH L     QQ          RR  + LL++S+ + E    L + +  + D+  G P    DP  A+QL                     L                       LS+D   M  L + Y  G   L  +  +A  W+E+ +  G+ P A+ +LA +LA +N        +RA +LL+ AI Q+  E  L   A ++     V N  +A+ L+  ++ +  ++ +   L  I L G    P +   A R     +DRT    +  +L  + WSG    +AN   AV+L + +S  ++P      AS  RY      +++ +  L+L+E +    G F +  K ++ AI+LSE++   +L    V  +F+  ++  +    + WLPL LR     LP  G    +T+A+ +       S+LNLSS LLEK     + K  P  + LLE  +         +NL Y+L  GV GV  +  RAI L E  +  + +  AR LLA  L + ++  +  + +++ LW+ V    +D EE V R+  +IS +A+
Sbjct:   34 RRLERAISARNDPDAMLSLSELLQRGAPGVRSDPSRALQLLQRAATQHRSAA-----TLHRLAAAHWQQPPPPSVAPRPRRFALDLLQQSIALSETPRALCDCAWLLVDAN-GTPEIHDDPHRAVQLLQRAVTRFDSAPAECFHNLAYLLASDQLSQPDPVAAVAHYKRAIKLSHDPRTMINLAILYQYGRPPLKPNPRKAQIWYERVLTHGDFPYAQYHLAVILASSNRASHL---LRAAKLLDNAISQIDCEAALLLSASLHSTKRSVLNHAKAVRLLRAAISQFDSTDAMESLCYILLSGRPGVPCNPCEAFRLITAFHDRTKITYTRALLAELHWSGTASHRANRVRAVQLCQ-KSLHKVPVTYTTLASMHRYGHGKQLNQSLNLALQLLEHIQCSPGDFLYVWKNMMLAIVLSEVQHPYALLLHRVFCMFKEGVDSTDDDYWWFWLPLHLRQSSIALPVCGCPHRITHAVMKEEELRVVSILNLSSLLLEKHIILPENKDVPTALSLLESGVSKYNNDLVRINLAYVLWYGVSGVHKDPSRAIQLVEGVMARSSHQLARTLLACMLAERQRDGD--VPRAVELWKQVTRSLRDVEE-VDRLCMLISPKAE 635
The following BLAST results are available for this feature:
BLAST of Gchil914.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IN89_9FLOR3.960e-3627.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 505..541
e-value: 5.8
score: 15.8
coord: 29..64
e-value: 49.0
score: 7.7
coord: 176..212
e-value: 12.0
score: 12.9
coord: 214..251
e-value: 67.0
score: 6.5
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 215..249
e-value: 1.2
score: 10.0
coord: 145..170
e-value: 5.8
score: 7.8
coord: 506..534
e-value: 0.02
score: 15.6
coord: 182..212
e-value: 0.014
score: 16.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 440..572
e-value: 3.5E-7
score: 32.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 4..146
e-value: 9.6E-13
score: 49.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 147..379
e-value: 6.0E-18
score: 66.8
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 157..264
coord: 11..169
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 157..264
coord: 11..169
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 16..137
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 469..558
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 119..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:1343409..1345268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil914.t1Gchil914.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 1343409..1345268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil914.t1 ID=Gchil914.t1|Name=Gchil914.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=620bp
MPSAGPSSNDTPEAQMRFYEKAIKRHNDPLAMVNLADLLFSAKQKELHIP
RAVQLLQRAIKQHKDPTAMNNLALHYLRDGDNQQRRLVIPLLERSLRIEE
DSIVLRNLSDAVKDSRCGKPDPEIAIQLCERALRFGDDPKCIEVLAYNLL
TLKGIKTQRRRAVKLFEKAIHLSNDASVMNCLGVCYVDGTYHLPASSTRA
AKWFEKAIKAGNLPDAKCNLAYLLAGNNLPPSKRDPVRAVRLLEEAIQQV
QSEVCLRTLAKIYRDVEQVSNLPRAIHLMETSLREHGTSFSRNFLLDIFL
GFKSAPADYARALRFCRDDYDRTDHIASFRVLVCIMWSGAVDVKANPPFA
VELMKARSCEQLPEEASALRYESETEDDVLKLVEQLSGSFFFGTKLLIWA
ILLSELESESSLRHAEVLFRTFMNDEEAKVMFAWLPLSLRVCRFTLPFHG
DRKCMTYAMKRATHCYEASLLNLSSFLLEKGCDSSDEKPETVKLLEEAMD
TGLRVPAMLNLGYMLLTGVGGVPMNRGRAIDLFEICIEETDNACARALLA
NALVDGEKCAEEVIRKSLGLWQSVEEEYKDDEEEVSRMRWMISDRAKDVW
ATLNGGDCSQFMASGRLSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf