Gchil9110.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9110.t1
Unique NameGchil9110.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length538
Homology
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BLAST of Gchil9110.t1 vs. uniprot
Match: A0A1X6NMH9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMH9_PORUM)

HSP 1 Score: 192 bits (489), Expect = 1.600e-49
Identity = 115/316 (36.39%), Postives = 163/316 (51.58%), Query Frame = 0 
Query:  129 EIWVETGIDELNNCRPV-MTNSTGVCSSPWNGHSDVGIASAALLVQRSAWIDSDWDIVYEGSSVNMSLNDVHVNEIGKFALSNAQPAA---LASNCNVQVQPCTN---CGTLTVGKDCGTFDTIITNASIVDAP-NYCQKKNDANYCRGDVTYDTATGLAFFFWSVRTENENGQRQVA----------------TKGIEVLLNEQDKRKVLTGNEAVWKISPDSNRSRLYSISCASKGLHWTDLTRAVSIYRTVQMERPGEKKENVNGNIKNIMPLTSSDVLRSLFALKAEDISSTCDGLVPQYTQCGTFDVSKAS 420
             ++ ETG+ E        +T S GVC+SPW GHSDVG+A+AALLVQR  W+D++W  V EG+S  M + +   +           PAA   + ++C V+V  C     CG+LTV +  G FDT++T AS   A  +   +     Y  GDVTYD A G+AF                                  +G+EVLL+  +  ++L    A W +     RSR Y+++C + GL   D+ RA + YRT+QME+PG  +  V G +  + PL+ SDV +  FALKAED SSTC G V  Y   G F ++ A+
Sbjct:   64 RLYFETGLHEAPTAAATTVTRSNGVCASPWGGHSDVGVAAAALLVQRLGWLDAEWTAVVEGASKAMDVAERFTDGGPHAGGGGDDPAARRYVVADCTVEVGACAGAGGCGSLTVARTGGPFDTVVTGASAAGAATDEADRGPGVPYGTGDVTYDGAAGVAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGVEVLLSPPEVARLLAAAAAPWSLPAAPPRSRAYTLACGTDGLTAADVARAAARYRTMQMEQPGVVRAGVRGELGRLPPLSPSDVAKGAFALKAEDASSTCGGTVAVYRPRGAFALAAAA 379
The following BLAST results are available for this feature:
BLAST of Gchil9110.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1X6NMH9_PORUM1.600e-4936.39Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 437..537
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 419..436
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..418
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1917536..1919375 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9110.t1Gchil9110.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1917536..1919375 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9110.t1 ID=Gchil9110.t1|Name=Gchil9110.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=538bp
MTLSLVSIRLLLYLQQQCGSSLSALAQIGGPCCCISFGRLATLFDTPTHW
FSTSLSLLLERLYVHTSSLQFRLTGKTFSLDSGEVSVFRGLKSVLNTLSC
HRINRTKTYISSTWVSFLILLSLISLPSEIWVETGIDELNNCRPVMTNST
GVCSSPWNGHSDVGIASAALLVQRSAWIDSDWDIVYEGSSVNMSLNDVHV
NEIGKFALSNAQPAALASNCNVQVQPCTNCGTLTVGKDCGTFDTIITNAS
IVDAPNYCQKKNDANYCRGDVTYDTATGLAFFFWSVRTENENGQRQVATK
GIEVLLNEQDKRKVLTGNEAVWKISPDSNRSRLYSISCASKGLHWTDLTR
AVSIYRTVQMERPGEKKENVNGNIKNIMPLTSSDVLRSLFALKAEDISST
CDGLVPQYTQCGTFDVSKASILLVVNSFAVLLYLALRIAGLKQRHVPFPT
NVSSWKKYATGARESNGDFAIAMESESPDNRLVVIDLSRLMSKSLSYQQP
KAPVIEVTSSTASHLVSNTSDERRELVQKRAACMPAG*
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