Gchil9063.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9063.t1
Unique NameGchil9063.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length300
Homology
BLAST of Gchil9063.t1 vs. uniprot
Match: A0A2V3IJT3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJT3_9FLOR)

HSP 1 Score: 362 bits (928), Expect = 1.030e-122
Identity = 205/281 (72.95%), Postives = 238/281 (84.70%), Query Frame = 0
Query:    1 MSVDVLRDNLADREAKLDVLRKKVKHAKERAARPKSKATISSIQQRYLSAIADLEDKEKELPKAHVRSTANAVSSLASRWNQGIDERKVEKTKVHVRGDITAAKKNFAYSDAPSATKAGARASSGAADSGPSEIVVEDGSDIPSWAKNQRKLVIKKENARSSVRVDVKELQGSVLMNAARDGSEAERTTKVEHAGNVKAALAMWGKTAEEDAKILAKKKQEEERERVLQEKLRKEREAEELARAYNAAVQEFAKMTLADMDDEPSKEIELIAFLERKITLV 281
            MSV+ LRD L++REAKLD LR K+K AKERAARPK K+TISSIQQRYLSAIA+ EDKE   P+  +R++ NAVSSLASRWNQGI+ERKVEKT+V VRG+++ AKKNF ++DA    K+ A+  +   D GP+EI VED S IPSWAKNQ+KLVIKKENARSSVRVDVKELQGSVLMNAARDGSEAERT KVEH GNVKAALAMWGKTA+EDAK+LAKKK+  ER+R L EKLRKEREAEE AR   AAV++FA+M L+DM DEPS+E+E+I FLERKITLV
Sbjct:    1 MSVEALRDKLSEREAKLDGLRAKLKAAKERAARPKPKSTISSIQQRYLSAIAESEDKEVHKPQ--IRASTNAVSSLASRWNQGIEERKVEKTRVSVRGNVSGAKKNFVHNDAHVVGKSVAKLVADV-DRGPAEIEVEDDSHIPSWAKNQQKLVIKKENARSSVRVDVKELQGSVLMNAARDGSEAERTNKVEHVGNVKAALAMWGKTADEDAKVLAKKKEXXERQRRLDEKLRKEREAEERARVIKAAVEKFAQMQLSDMTDEPSQELEIIPFLERKITLV 278          
BLAST of Gchil9063.t1 vs. uniprot
Match: R7QDT3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDT3_CHOCR)

HSP 1 Score: 238 bits (606), Expect = 7.520e-74
Identity = 153/299 (51.17%), Postives = 200/299 (66.89%), Query Frame = 0
Query:    2 SVDVLRDNLADREAKLDVLRKKVKHAKERAARPKSKATISSIQQRYLSAIADLEDKEKELPKAHVRSTANAVSSLASRWNQGIDERKVEKTKVHVRGDITAAKKNFAYSDAPSATK-AGARASSGAADSGPSEIVVED-GSDIPSWAKNQRKLVIKKENARSSVR-VDVKELQGSVLMNAARDGSEAERTTKVEHAGNVKAALAMWGKTAEEDAKILAKKKQEEERERVLQEKLRKEREAEELARAYNAAVQEFAKMTLADMD-DEPSKEIELIAFLERKITLVEQEIKKLEGELAELE 296
            SV  LR+ L  RE +L VLR+K++ A++ A+ P +K+ IS+IQQRY++A+A+L+ KEKE+PK  V S+   VS+LAS+WNQGI   +V KT+V VRGD+   +KNF  SD P AT     +      D GP+E++VED  + +PSWA NQ K VI+KENARSS+R VDVKE+QGSVL NAARDGSEA+  + VE  GNVKAALAMWGKTAEED                               RA  AA++ FA +TL+ +   EP+KE+EL+A+LERKI LVE+EIK  E EL++LE
Sbjct:    4 SVHALRERLHTREHELKVLREKIEKARQAASSPATKS-ISAIQQRYMAAVAELDKKEKEIPKPIVNSSTAGVSNLASKWNQGISSAQVTKTRVDVRGDVRGTQKNFNASDVPKATSNQPTKTKKSNVDPGPAELLVEDEDAGLPSWAINQSKKVIRKENARSSIRDVDVKEIQGSVLTNAARDGSEAQGES-VEAKGNVKAALAMWGKTAEEDTXXXXXXXXXXXXXXXXXAIKHXXXXXXXXERAAKAAIERFASLTLSSLPAQEPTKEVELVAYLERKIVLVEKEIKITEEELSKLE 300          
BLAST of Gchil9063.t1 vs. uniprot
Match: A0A2V3IU39_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU39_9FLOR)

HSP 1 Score: 74.3 bits (181), Expect = 1.310e-13
Identity = 45/63 (71.43%), Postives = 52/63 (82.54%), Query Frame = 0
Query:  206 KTAEEDAKILAKKKQEEERERVLQEKLRKEREAEELARAYNAAVQEFAKMTLADMDDEPSKEI 268
            KT +EDAK LAKKK EEERE+  QEKL KEREA+E A+AY  AV+ FAKM LADMD+EPSKE+
Sbjct:    6 KTTDEDAKRLAKKK-EEEREKASQEKLGKEREAKERAKAYKRAVEAFAKMKLADMDEEPSKEM 67          
BLAST of Gchil9063.t1 vs. uniprot
Match: A0A2V3IRH0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRH0_9FLOR)

HSP 1 Score: 72.0 bits (175), Expect = 3.110e-12
Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 0
Query:  206 KTAEEDAKILAKKKQEEERERVLQEKLRKEREAEELARAYNAAVQEFAKMTLADMDDEPS 265
            KTA+EDAK+LAKK +EEERE+  QEKLRK+ EAEELA+AY  AV+ FA M LADMD+EPS
Sbjct:   54 KTADEDAKLLAKK-EEEEREKGSQEKLRKQCEAEELAKAYKRAVEAFANMKLADMDEEPS 112          
The following BLAST results are available for this feature:
BLAST of Gchil9063.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IJT3_9FLOR1.030e-12272.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QDT3_CHOCR7.520e-7451.17Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IU39_9FLOR1.310e-1371.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRH0_9FLOR3.110e-1271.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 271..299
NoneNo IPR availableCOILSCoilCoilcoord: 3..30
NoneNo IPR availableCOILSCoilCoilcoord: 205..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1266802..1267701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9063.t1Gchil9063.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1266802..1267701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9063.t1 ID=Gchil9063.t1|Name=Gchil9063.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=300bp
MSVDVLRDNLADREAKLDVLRKKVKHAKERAARPKSKATISSIQQRYLSA
IADLEDKEKELPKAHVRSTANAVSSLASRWNQGIDERKVEKTKVHVRGDI
TAAKKNFAYSDAPSATKAGARASSGAADSGPSEIVVEDGSDIPSWAKNQR
KLVIKKENARSSVRVDVKELQGSVLMNAARDGSEAERTTKVEHAGNVKAA
LAMWGKTAEEDAKILAKKKQEEERERVLQEKLRKEREAEELARAYNAAVQ
EFAKMTLADMDDEPSKEIELIAFLERKITLVEQEIKKLEGELAELEAAE*
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