Gchil9054.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil9054.t2
Unique Name	Gchil9054.t2
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	431

Homology

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BLAST of Gchil9054.t2 vs. uniprot
Match: A0A2V3IJU3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJU3_9FLOR)

HSP 1 Score: 411 bits (1057), Expect = 3.380e-138
Identity = 246/379 (64.91%), Postives = 285/379 (75.20%), Query Frame = 0

Query:   47 LRLGKARISSVTDSDSRASSPRATPPHPDRLSNAPLRRRLPDLRAIPPGPSHSGVGARHKDHKDDVVVDDDNXXXXXAGSTYSHASVLNLDDLEDDEHHVLATRL-QRYTQRLSRSRQXXXXXXVRGGARNT-RGAVVLARDEYQSHNCLEPLFERAVHALVDAVDADALSASAAVASYRAFSPLYTNTERTVVSSLFRNASAQLRREAPTPWRSPL-VRETVRVQLPDGVDEALVRGVMYGAHVLPGAGAETILIRLAAAYHREQLRKRYAKARRVMVPLSFAMTLTALLAALSRLECSMAFRRLRSRAATRRVAEPHAVVAVRAKYDGARLAFDVSLHGDAPCTVLFRKPRLLPSSKLADFNAIVAEVATVITDFGH 422
            L LGK RISSVTDS S  SSPR +   PDR +  PLRR LPD+  +PPGP H+                 D XXXXXA STYSHASVLNLDDL+DD  H+L  RL +R T RL RS+         G  RN  R AVVLA++EYQ HN LEPLFER VHAL DAVDADAL+A+AAVAS+RAFS L+T+ ER V++ LFR+ASA LRREAPTPWRSPL V++  R+  P G+DE+LVR V+YGAH+LP AG ETILIRLA  YHREQLRKR AK +RV+VPLSF+MTLTALLAALSRLECS AFRR RSRAAT R  EPHAV+ VR  YDGARL+FD+SLHG+APCTVLFRKP+LL S K ADF+AIV E+  V+T+F +
Sbjct:   72 LPLGKPRISSVTDSSSTTSSPRVSI-RPDRRATPPLRRHLPDVPVLPPGPIHAS----------------DXXXXXXAASTYSHASVLNLDDLDDD--HLLGIRLPRRPTLRLCRSK---------GNNRNQPRRAVVLAQNEYQPHNRLEPLFERCVHALCDAVDADALAATAAVASFRAFSQLFTSIERNVIAHLFRSASALLRREAPTPWRSPLNVQQPARLTPPPGMDESLVRAVVYGAHILPAAGPETILIRLAGVYHREQLRKRAAKDQRVLVPLSFSMTLTALLAALSRLECSPAFRRFRSRAATTRTGEPHAVIVVRVNYDGARLSFDISLHGEAPCTVLFRKPKLLASRKTADFDAIVGEIRGVLTEFAN 422

The following BLAST results are available for this feature:

BLAST of Gchil9054.t2 vs. uniprot

BLAST of Gchil9054.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IJU3_9FLOR	3.380e-138	64.91	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..129
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 320..340
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..319
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 341..430
None	No IPR available	TMHMM	TMhelix		coord: 320..342

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004370_pilon	contig	tig00004370_pilon:1200731..1202023 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil9054.t2	Gchil9054.t2	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004370_pilon 1200731..1202023 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil9054.t2 ID=Gchil9054.t2|Name=Gchil9054.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=431bp
MVIRHALPRVAALSAVPTIRSITGVDVCPPRAELASTGCDEDGGGALRLG
KARISSVTDSDSRASSPRATPPHPDRLSNAPLRRRLPDLRAIPPGPSHSG
VGARHKDHKDDVVVDDDNDDNEDAGSTYSHASVLNLDDLEDDEHHVLATR
LQRYTQRLSRSRQWREWRGVRGGARNTRGAVVLARDEYQSHNCLEPLFER
AVHALVDAVDADALSASAAVASYRAFSPLYTNTERTVVSSLFRNASAQLR
REAPTPWRSPLVRETVRVQLPDGVDEALVRGVMYGAHVLPGAGAETILIR
LAAAYHREQLRKRYAKARRVMVPLSFAMTLTALLAALSRLECSMAFRRLR
SRAATRRVAEPHAVVAVRAKYDGARLAFDVSLHGDAPCTVLFRKPRLLPS
SKLADFNAIVAEVATVITDFGHVVSAAQLP*