Gchil9001.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9001.t1
Unique NameGchil9001.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length460
Homology
BLAST of Gchil9001.t1 vs. uniprot
Match: A0A2V3IYA8_9FLOR (Beta-glucosidase 1B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYA8_9FLOR)

HSP 1 Score: 154 bits (389), Expect = 3.530e-37
Identity = 81/188 (43.09%), Postives = 114/188 (60.64%), Query Frame = 0
Query:  257 ILDNLRGVARHQSYSLQQVSISLSEIG--KYCTVDMVWIPSHCGIPRNDMVDNLAKEALNISMQDQVAVPVDFADVKRRVITKEKKSPLIENIPEGLENIVSLREANVALSQLVVGHTPCLHRLGSYLQKKRLYCTCRPGVLNDVDHYVLRCPSRTMSRRICLPPVQERQGLA--VDEIIKKWPEKML 440
            ++D L+   R Q  SLQ VS  +S I   + C VD+ WIP HCG+P+N+ VD+LAK+ L+  ++DQV VPV F D K R++   +  PLI ++PE  +NI+S R+A V  SQ+ VGHTP  H + SY++ K   C C    +N  +HYVLRC  RT SRR  LP   ER+     + E   K+P+  +
Sbjct:    1 MVDGLQSSLRQQPSSLQTVSRIISSITDKRGCFVDIAWIPGHCGLPQNERVDSLAKQGLSTPLKDQVKVPVFFEDAKTRIMAASRAKPLINDVPEEQQNIISPRKAEV--SQIYVGHTPKHHPVASYIEGKPSQCDCNAHAINSAEHYVLRCHKRTDSRRRELPAAAERKDTVAVMAESTMKFPDSFM 186          
BLAST of Gchil9001.t1 vs. uniprot
Match: UPI001C9235D9 (uncharacterized protein LOC122375908 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C9235D9)

HSP 1 Score: 67.0 bits (162), Expect = 1.210e-8
Identity = 73/253 (28.85%), Postives = 108/253 (42.69%), Query Frame = 0
Query:  194 GGSAFAIWWNDDKEPQKGMFPAGVETCSFFTEIKALKKALQVVLIRVREGWIGN--------IRIVTDSHSILDNLRGVARHQSYSLQQV---SISLSEIGKYCTVDMVWIPSHCGIPRNDMVDNLAKEALNISMQDQVAVPVDFADVKRRVI------TKEKKSP------LIENIPEGLENIVSLREANVALSQLVVGH----TPCLHRLGSYLQKKRLYCTCRP--GVL--------NDVDHYVLRCPSR 409
            GG+   I W D  E  +   PAG    S+  E+ AL++ L          +IGN        I + TDS + L  LR     Q   L +    +++L        V + W+PSHCG+P N+M D+LAKEA ++  +    VPVD   V R         T+E++ P      +    P  +  +  L   +V   QL  GH       LHR+G    ++   C  R   G L        +  DH +LRCP++
Sbjct:   18 GGAGGYIEWPDG-ESHELRAPAGKLCSSYRAEMVALRETLN---------YIGNHTDHEEDPIILCTDSQAALSALRSGPAEQRTQLNRAVWDALALVSDNGERQVLLQWVPSHCGLPGNEMADSLAKEAASLPQEQ---VPVDTRTVHRAAARAADARTREQRPPGWFRTLMGTTRPPTVSGLDRLTAIDV--HQLRAGHWSGSQQYLHRIGKSPTRQCDACNERACGGALCPLCKEEADTPDHILLRCPAQ 255          
BLAST of Gchil9001.t1 vs. uniprot
Match: UPI001C91C093 (uncharacterized protein LOC122389163 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C91C093)

HSP 1 Score: 67.8 bits (164), Expect = 1.890e-8
Identity = 73/253 (28.85%), Postives = 108/253 (42.69%), Query Frame = 0
Query:  194 GGSAFAIWWNDDKEPQKGMFPAGVETCSFFTEIKALKKALQVVLIRVREGWIGN--------IRIVTDSHSILDNLRGVARHQSYSLQQV---SISLSEIGKYCTVDMVWIPSHCGIPRNDMVDNLAKEALNISMQDQVAVPVDFADVKRRVI------TKEKKSP------LIENIPEGLENIVSLREANVALSQLVVGH----TPCLHRLGSYLQKKRLYCTCRP--GVL--------NDVDHYVLRCPSR 409
            GG+   I W D  E  +   PAG    S+  E+ AL++ L          +IGN        I + TDS + L  LR     Q   L +    +++L        V + W+PSHCG+P N+M D+LAKEA ++  +    VPVD   V R         T+E++ P      +    P  +  +  L   +V   QL  GH       LHR+G    ++   C  R   G L        +  DH +LRCP++
Sbjct:  273 GGAGGYIEWPDG-ESHELRAPAGKLCSSYRAEMVALRETLN---------YIGNHTDHEEDPIILCTDSQAALSALRSGPAEQRTQLNRAVWDALALVSDNGERQVRLQWVPSHCGLPGNEMADSLAKEAASLPQEQ---VPVDTRTVHRAAARAADARTREQRPPGWFRTLMGTTRPPTVSGLDRLTAIDV--HQLRAGHWSGSQQYLHRIGKSPTRQCDACNERACGGALCPLCKEEADTPDHILLRCPAQ 510          
BLAST of Gchil9001.t1 vs. uniprot
Match: UPI001E276440 (uncharacterized protein LOC123675338 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E276440)

HSP 1 Score: 67.4 bits (163), Expect = 2.050e-8
Identity = 61/210 (29.05%), Postives = 97/210 (46.19%), Query Frame = 0
Query:  220 CSFFT-EIKALKKALQVVLIRVREGWIGNIRIVTDSHSILDNLRGVARHQSY--SLQQVSISLSEIGKYCTVDMVWIPSHCGIPRNDMVDNLAKEALNISMQDQVAVPVDFADVKRRVI---------TKEKKSPLIENIPEGLENIVSLREANVALSQLVVGHTPCLHRLGSYL--QKKRLYCTCRPGVLNDVDHYVLRCPSRTMSRRI 415
            CS FT E+ A+KKAL+ +     E    +  I+TDSHS L  ++   +  +    +  +  S+ +  K  T  ++WIPSHCGI  N+MVD  AKEA+      +V    D +++ +  +         +K  K  LI+        I  LR+  V L +L +GHT   H+   YL  Q+   +C      L    H ++ C      R++
Sbjct:  222 CSIFTAELFAIKKALECIA----ELGTSHPIIITDSHSSLHAIQRTYKDNTIVNDITDLICSIQDNNKSLT--LMWIPSHCGIDGNEMVDAAAKEAIIDGHYTEVLTNYDLSNLCKNKVKDKWKSVWQSKSSKLALIDPTIHTKPPITQLRQDLVVLRRLRIGHTRETHQ---YLLRQESPPWCQSCNSQLTT-RHMIIECQLFDAHRKL 421          
BLAST of Gchil9001.t1 vs. uniprot
Match: A0A4Y2LFK3_ARAVE (RNase H type-1 domain-containing protein (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2LFK3_ARAVE)

HSP 1 Score: 63.9 bits (154), Expect = 1.440e-7
Identity = 60/212 (28.30%), Postives = 101/212 (47.64%), Query Frame = 0
Query:  220 CSFFT-EIKALKKALQVVLIRVREGWIGNIRIVTDSHSILDNLRGVARHQSYSLQQVSISLSEIGKYC-----TVDMVWIPSHCGIPRNDMVDNLAKEALNISMQDQVAVPVDFADVKRRVITK-----EKKSPLIENI------PE-GLENIVSLREANVALSQLVVGHTPCLHRLGSYLQKKRLYCTCRPGVLNDVDHYVLRCPSRTMSR 413
            CS FT E+ A+  ALQV+L   +  +I    I TDS S L+ L     H    +  V + +  I ++      ++   W+PSH GI  N+  D +AK A  +  +   A+P  + D+K+  +++     ++K  L+ N       P  GL   + +R+ +V LS+L +GHT   H+   + ++  +  TC       V H ++ CPS    R
Sbjct:   58 CSVFTAELVAIFSALQVILPSSQRNFI----IYTDSMSALETLS----HYDTQMHPVGLEILSILQFLRKEGFSIIFCWVPSHVGISGNETADAIAKFASAVLPR---ALP--YVDIKKFFVSRLFSLWQQKWDLLTNNKLHSVKPSIGLWPNLPIRQVDVKLSRLRIGHTRFTHKYLIFGERAPVCPTCHQNF--TVHHILIECPSFNSHR 254          
BLAST of Gchil9001.t1 vs. uniprot
Match: UPI001C9B3C24 (uncharacterized protein LOC122400322 n=1 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9B3C24)

HSP 1 Score: 62.0 bits (149), Expect = 3.390e-7
Identity = 55/187 (29.41%), Postives = 88/187 (47.06%), Query Frame = 0
Query:  247 NIRIVTDSHSILDNLRGVARHQSYSL-QQVSISLSEIGKYCTVDM--VWIPSHCGIPRNDMVDNLAKEALNISMQDQVAVPVDFADVKRRV--ITKE------------KKSPLIENIPEGLENIVSLREANVALSQLVVGHTPCLHRLGSYLQKK--RLYCTCRPGVLNDVDHYVLRCPSRTMSRR 414
            N+ I +DS S++  L     + S+ +  ++  + +E+ K    D+  +WIPSH GIP N+  D  AKEA  +S   +  VP+ + D+   +   TKE            K   +I+N  E +      R+    LS+L  GHT   H    +L +K  + YC+  P     VDH + +C  RT  +R
Sbjct:   35 NVAIFSDSMSVMKALETSNSNNSHEIITKIQEAYTELDKNYNTDINIIWIPSHQGIPGNEEADAAAKEATILS-PTETTVPIPYQDLINHMKKTTKEEWNRMWTTTKRTKIHDIIQNFYEPIPTCNLNRKEKSILSRLRSGHTKITHE---HLIRKTDQPYCSHCPTETLTVDHILYQC-RRTEPQR 216          
BLAST of Gchil9001.t1 vs. uniprot
Match: A0A4Y2KNS4_ARAVE (RNase H type-1 domain-containing protein n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2KNS4_ARAVE)

HSP 1 Score: 61.2 bits (147), Expect = 1.200e-6
Identity = 59/208 (28.37%), Postives = 98/208 (47.12%), Query Frame = 0
Query:  219 TCSFFT-EIKALKKALQVVLIRVREGWIGNIRIVTDSHSILDNLRGVARHQSYSLQQVSISLSEI-----GKYCTVDMVWIPSHCGIPRNDMVDNLAKEALNISMQDQVAVPVDFADVKRRVITK-----EKKSPLIENI------PE-GLENIVSLREANVALSQLVVGHTPCLHRLGSYLQKKRLYCTCRPGVLNDVDHYVLRCPS 408
            +CS FT E+ A+  ALQ +    +  +I    I TDS S L+ L     H    +  V + +  I      K   +   W+PSH GI  N+  D +AK A  +  +   A+P  + D+K+  +++     ++K  L+ N       P  GL  I+ +R+ +V LS+L +GHT   H+   + ++  +  TC       V H ++ CPS
Sbjct:   94 SCSVFTAELVAIFCALQEISPSSQRNFI----IYTDSMSALETLS----HYDTQMHPVGLEILSILQFLRNKSFNIIFCWVPSHVGISGNETADAIAKFASAVLPR---ALP--YVDIKKFFVSRLFSLWQQKWDLLTNNKLHSVKPSIGLWPILPIRQVDVKLSRLRIGHTRFTHKYLIFGERAPVCPTCHQNF--TVHHILIECPS 286          
BLAST of Gchil9001.t1 vs. uniprot
Match: A0A4Y2LGH5_ARAVE (Uncharacterized protein (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2LGH5_ARAVE)

HSP 1 Score: 61.6 bits (148), Expect = 1.760e-6
Identity = 62/208 (29.81%), Postives = 98/208 (47.12%), Query Frame = 0
Query:  220 CSFFT-EIKALKKALQVVLIRVREGWIGNIRIVTDSHSILDNLRGV-ARHQSYSLQQVSISLSEIGKYCTVDMVWIPSHCGIPRNDMVDNLAKEALNISMQDQVAVPVDFADVKRRVITK-----EKKSPLIENI------PE-GLENIVSLREANVALSQLVVGHTPCLHRLGSYLQKKRLYCTCRPGVLNDVDHYVLRCPSRTMSR 413
            CS FT E+ A+  ALQ +L   R  +I    I TDS S L+ L    +R    +L+ +S+      K   +   W+PSH GI  N+  D +A+ A      D +   + + D+K+ +I+      ++K  L  N       P  GL + + +RE +V L++L +GHT   HR     Q+ +   TC+      V H ++ CPS    R
Sbjct:  372 CSVFTAELVAIFCALQELLPSNRRHFI----IYTDSMSALETLSHYDSRTHPVALEIISVLQFLRNKGFNIIFCWVPSHVGISGNETADVIARFA-----SDFLPRALPYCDIKKFLISHLLSVWQQKWNLFTNNKLYSVKPSIGLWSALPMRELDVKLTRLRIGHTRFTHRHLFLGQRAQRCPTCQADF--TVQHILIECPSFNCHR 568          
BLAST of Gchil9001.t1 vs. uniprot
Match: A0A4Y2U576_ARAVE (Putative RNA-directed DNA polymerase from transposon X-element n=3 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2U576_ARAVE)

HSP 1 Score: 61.6 bits (148), Expect = 2.220e-6
Identity = 59/212 (27.83%), Postives = 100/212 (47.17%), Query Frame = 0
Query:  220 CSFFT-EIKALKKALQVVLIRVREGWIGNIRIVTDSHSILDNLRGVARHQSYSLQQVSISLSEIGKYC-----TVDMVWIPSHCGIPRNDMVDNLAKEALNISMQDQVAVPVDFADVKRRVITK-----EKKSPLIENI------PE-GLENIVSLREANVALSQLVVGHTPCLHRLGSYLQKKRLYCTCRPGVLNDVDHYVLRCPSRTMSR 413
            CS FT E+ A+  ALQ +L   +  +I    I TDS S L+ L     H    +  V + +  I ++      ++   W+PSH GI  N+  D +AK A  +  +   A+P  + D+K+  +++     ++K  L+ N       P  GL   + +R+ +V LS+L +GHT   H+   + ++  +  TC       V H ++ CPS    R
Sbjct:  747 CSVFTAELVAIFSALQEILPSSQRNFI----IYTDSMSALETLS----HYDTQMHPVGLEILSILQFLRKEGFSIIFCWVPSHVGISGNETADAIAKFASAVLPR---ALP--YVDIKKFFVSRLFSLWQQKWDLLTNNKLHSVKPSIGLWPNLPIRQVDVKLSRLRIGHTRFTHKYLIFGERAPVCPTCHQNF--TVHHILIECPSFNSHR 943          
BLAST of Gchil9001.t1 vs. uniprot
Match: A0A4Y2BZA5_ARAVE (RNase H type-1 domain-containing protein n=3 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2BZA5_ARAVE)

HSP 1 Score: 60.8 bits (146), Expect = 2.370e-6
Identity = 59/212 (27.83%), Postives = 100/212 (47.17%), Query Frame = 0
Query:  220 CSFFT-EIKALKKALQVVLIRVREGWIGNIRIVTDSHSILDNLRGVARHQSYSLQQVSISLSEIGKYC-----TVDMVWIPSHCGIPRNDMVDNLAKEALNISMQDQVAVPVDFADVKRRVITK-----EKKSPLIENI------PE-GLENIVSLREANVALSQLVVGHTPCLHRLGSYLQKKRLYCTCRPGVLNDVDHYVLRCPSRTMSR 413
            CS FT E+ A+  ALQ +L   +  +I    I TDS S L+ L     H    +  V + +  I ++      ++   W+PSH GI  N+  D +AK A  +  +   A+P  + D+K+  +++     ++K  L+ N       P  GL   + +R+ +V LS+L +GHT   H+   + ++  +  TC       V H ++ CPS    R
Sbjct:  192 CSVFTAELVAIFSALQEILPSSQRHFI----IYTDSMSALETLS----HYDTQMHPVGLEILSILQFLRKEGFSIIFCWVPSHVGISGNETADAIAKFASAVLPR---ALP--YVDIKKFFVSRLFSLWQQKWDLLTNNKLHSVKPSIGLWPHLPIRQVDVKLSRLRIGHTRFTHKYLIFGERAPVCPTCHQNF--TVHHILIECPSFNSHR 388          
The following BLAST results are available for this feature:
BLAST of Gchil9001.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2V3IYA8_9FLOR3.530e-3743.09Beta-glucosidase 1B n=1 Tax=Gracilariopsis chorda ... [more]
UPI001C9235D91.210e-828.85uncharacterized protein LOC122375908 n=1 Tax=Amphi... [more]
UPI001C91C0931.890e-828.85uncharacterized protein LOC122389163 n=1 Tax=Amphi... [more]
UPI001E2764402.050e-829.05uncharacterized protein LOC123675338 n=1 Tax=Harmo... [more]
A0A4Y2LFK3_ARAVE1.440e-728.30RNase H type-1 domain-containing protein (Fragment... [more]
UPI001C9B3C243.390e-729.41uncharacterized protein LOC122400322 n=1 Tax=Colle... [more]
A0A4Y2KNS4_ARAVE1.200e-628.37RNase H type-1 domain-containing protein n=2 Tax=A... [more]
A0A4Y2LGH5_ARAVE1.760e-629.81Uncharacterized protein (Fragment) n=1 Tax=Araneus... [more]
A0A4Y2U576_ARAVE2.220e-627.83Putative RNA-directed DNA polymerase from transpos... [more]
A0A4Y2BZA5_ARAVE2.370e-627.83RNase H type-1 domain-containing protein n=3 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 184..312
e-value: 1.1E-12
score: 50.3
NoneNo IPR availablePANTHERPTHR10642:SF26SUBFAMILY NOT NAMEDcoord: 219..347
NoneNo IPR availablePANTHERPTHR10642RIBONUCLEASE H1coord: 219..347
IPR002156Ribonuclease H domainPROSITEPS50879RNASE_Hcoord: 206..314
score: 14.322435
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 193..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:916625..918004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9001.t1Gchil9001.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 916625..918004 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9001.t1 ID=Gchil9001.t1|Name=Gchil9001.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=460bp
MFKDSLSPIALAVKKESLTRIRKSRSTFKKAAEHQLATCGLLMLPREPWP
VPIVIHNSESICFHYTSCTKKDNIDFQRQQALSMLRSLRKADCEIWSDGS
VGRPNWLEIKKPLRAAVEWNEGWYTGYIEYLRKSGNYSKTVQNFYKKHGR
LPDISIHYDDGFVMAYSISENHRNLVDADGHELSCKTLEITEVGGSAFAI
WWNDDKEPQKGMFPAGVETCSFFTEIKALKKALQVVLIRVREGWIGNIRI
VTDSHSILDNLRGVARHQSYSLQQVSISLSEIGKYCTVDMVWIPSHCGIP
RNDMVDNLAKEALNISMQDQVAVPVDFADVKRRVITKEKKSPLIENIPEG
LENIVSLREANVALSQLVVGHTPCLHRLGSYLQKKRLYCTCRPGVLNDVD
HYVLRCPSRTMSRRICLPPVQERQGLAVDEIIKKWPEKMLVFLVRERFFD
KERSALRRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR002156RNaseH_domain
IPR012337RNaseH-like_sf