Gchil8935.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8935.t1
Unique NameGchil8935.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length854
Homology
BLAST of Gchil8935.t1 vs. uniprot
Match: A0A2V3IK11_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK11_9FLOR)

HSP 1 Score: 1004 bits (2595), Expect = 0.000e+0
Identity = 548/1053 (52.04%), Postives = 682/1053 (64.77%), Query Frame = 0
Query:    1 MIVPSSRFPKPSRLPSLLDES-PLFQKDDGNDRSRKNSRMPATLTTEPTFGLFSC----------------------------LDSGFSFKSGDMFTGPVLVDSDSLVVRQGCLFRYGLGMGQLSFCCQLPNGEAKRIDVARDADGFCIGALLFYDGESEVDSNSYADPEPPEKYVLCTKRENENWNVSEPTGGKTGCFLGASGEQDKIFVVSSSGSTASIFSFAAPSSNPGIQQVRQSRGVQRFKLISGGVRSVFRTPFAQWNAVLYHDCDNNRLVVSKNAFDADTYRRDSYQEAATAFAMDDDTAVPLRENEIVVDVRWQKLPSRSEQYIGAIMTDKRIFFVRHILSIHSVFDMQSIMRKVVPFCVPNMAWVGPSILLAHGNSVFSIALNSQADLVANLSNGGYLPALVACLPERIVYTTSSLDASQCSLAVATRPYSPVSSTVRGMLSFENLKTRRSPDLTDKVKEILDTHDASQASAELTDSLIENRLTPLAYLISVSAEGKGSLSPLRRSALLGRLGDFKGALTILEEE--------------------------------------------------------------------------------------------------------------------------------------------------------------------LMVLRREVFHEIESVGEQTGLSYGAGEFDGNMT-----TVMMAGRLPGDGLEEEQINSSDDDLFSSTKQETGL----QSGNGEGVMQEVTPTDDGDLTEITRKNTEETRRMLGKQKEKNDAALREMKVAASQMVASQRNLHASGTPSGSTRALEIFERSVRKYSDKRFVAAQNELDSALRSILRGRERGIGVTPELLNGIVLYQMACRIRIAMDEIASGEHANTIPGRVTYSQLANGLTKLLLTVQDRIDGLIQAVDANILLGNFGSAAQYMRLIHELGVPNDFRASLRDKYAACQTRGFVDTMPQSVGSICFQSLKVIGSSRFLRCTVCPALFATDVGIPALSICPCCGVGQVI 851
            M+V S+RFPKPSRLPSLLD+S     K + + R+R N+ +PAT+T +PTFGL +C                            LD+GFS    D+F GPVLVD DS+V  +GCLFRY LG   L  CCQLP+G+ +R++VARDADG C GAL+FYDG++EV+++SYADP+PP +YVLCTKR    WNVSEPTGG +GCFLGA G+QDKIF+VS++GS+AS++SFAAPSS+ G+QQ RQSRGVQRFKL    +  VFRTPFA+WNAVLYHD D NRL VSKNAFD+    RD+YQ+A+  F+MDD+TA+PL+ENE V+DVRWQKLPSRSEQY+GAIMTD+RI FVRH+LS+H+VFDMQ+I RKV PF  P ++WVGP ++LA GNSVFSIALN QADLVANLS+GG+LPALVACLP+R+VYTT++ D+ +C LA+A+RPYS VSSTVRG+LSFE L+  RS +L + VK ILDTHDASQASAELTD+LIE+ LTPLAYLI+VS EGKGS+SPLRR+A LG+LG+F+GAL+ILEEE                                                                                                                                                                    LMVLR+E FH+    G+     Y   EF G +      ++ + G+  G G +     S+DD +F +   +       + G+     Q    + DGDLT +TR+ TEETR+++ ++++ ND A+ EMK AA QMVASQRNL ++G P    RA E+F+R+VRKY + RF AAQ ELD+ALRS+LRG+ERGI V  +LLNGIV Y MACRIRIAM+EIASGEHANTIPGRVTY+QLANGLT  +L   DRI+GLIQAVDANILLGNFGSAAQ MR++ ELGVP + RASLR+KYA CQTRGFVDTMPQ  G +CF+SLKVI S+  LRC+VCPA+FATD G+    ICPCCG+GQ +
Sbjct:  306 MLVASNRFPKPSRLPSLLDDSRQSLHKPESSIRNRDNTGVPATITCDPTFGLLACSLDNTGGIYVFQPTVAGIPAVQRPVTCGLDTGFSAGGRDIFQGPVLVDPDSVVAHKGCLFRYELGTELLHVCCQLPSGDVRRVEVARDADGTCTGALVFYDGDTEVETDSYADPDPPGRYVLCTKRLKGKWNVSEPTGGDSGCFLGAPGKQDKIFIVSNTGSSASVYSFAAPSSSQGLQQTRQSRGVQRFKLAGNRIGEVFRTPFAEWNAVLYHDIDENRLAVSKNAFDSRAVSRDTYQDASIRFSMDDNTAIPLKENETVLDVRWQKLPSRSEQYLGAIMTDRRIVFVRHVLSVHAVFDMQTISRKVTPFAAPCISWVGPVVMLAQGNSVFSIALNGQADLVANLSHGGHLPALVACLPDRVVYTTTNSDSQKCCLAIASRPYSAVSSTVRGVLSFEALRNSRSANLAETVKAILDTHDASQASAELTDALIESNLTPLAYLIAVSKEGKGSMSPLRRAAFLGQLGEFRGALSILEEEYSRLPAYDSFHAGTELFRMVQRLLNMSFASGDFAVGRRCSALLGRRGTFSAFVDTEGGYAALRSVITAARISKNSYLLDTLHPLVEKSSVSSVATDSSMIVKTRDRQNVQRATKAVDPSAISLGSEDQHMIMIRISPGEDADGKQLPPQETKLVTNVAKDLNDRLMVLRQETFHDYVISGDDNETLYNENEFGGEVPQTIDGSIPVIGKSGGHGDD-----SADDGIFETMNGDNDRAPQPRKGSAHEANQFAGASSDGDLTALTRRKTEETRQLIVERRQANDTAVSEMKAAAGQMVASQRNLLSTGMPLAPVRAPEMFDRAVRKYGNGRFEAAQMELDTALRSVLRGKERGISVAQQLLNGIVYYHMACRIRIAMEEIASGEHANTIPGRVTYAQLANGLTAQVLLAADRIEGLIQAVDANILLGNFGSAAQAMRMVKELGVPEEKRASLREKYALCQTRGFVDTMPQPGGQLCFRSLKVITSAGVLRCSVCPAIFATDAGVAVSVICPCCGMGQTL 1353          
BLAST of Gchil8935.t1 vs. uniprot
Match: R7QGX5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGX5_CHOCR)

HSP 1 Score: 497 bits (1279), Expect = 1.480e-154
Identity = 343/1061 (32.33%), Postives = 511/1061 (48.16%), Query Frame = 0
Query:    1 MIVPSSRFPKPSRLPSLLDES------PLFQKDDGNDRSRKNSRMPATLTTEPTFGLFSC----------------------------LDSGFSFKSGDMFTGPVLVDSDSLVVRQGCLFRYGLGMGQLSFCCQLPNGEAKRIDVARDADGFCIGALLFYDG-ESEVDSNSYADPEPPEKYVLCTKR-ENENWNVSEPTGGKTGCFLGASGEQDKIFVVSSSGSTASIFSFAAPSSNPGIQQVRQSRGVQRFKLISGGVRSVFRTPFAQWNAVLYHDCDNNRLVVSKNAFDADTYRRDSYQEAATAFAM-------DDDTAVPLRENEIVVDVRWQKLPSRS--EQYIGAIMTDKRIFFVRHILSIHSVFDMQSIMRKVVPFCVPNMAWVGPSILLAHGNSVFSIALNSQADLVANLSNGGYLPALVACLPERIVYTTSSLDASQCSLAVATRPYSPVSSTVRGMLSFENLKTRRSPDLTDKVKEILDTHDASQASAELTDSLIENRLTPLAYLISVSAEGKGSLSPLRRSALLGRLGDFKGALTILEEELMVLRR--------EVFHEIESVGEQTGLSYGAGEFD-----------------------GNMTTVMMAGRLPGDG-----------------------------LEEEQI----------------NSSDDDLFSS---TKQETGLQSGNGEGVMQEVTPTDDGDLTEITRK--------------------------------------------------------------------------------------NTEETRRMLGKQKEKNDAALREMKVAASQMVASQRNLHASGTPSGSTRALEIFERSVRKYSDKRFVAAQNELDSALRSILRGRERGIGVTPELLNGIVLYQMACRIRIAMDEIASGEHANTIPGRVTYSQLANGLTKLLLTVQDRIDGLIQAVDANILLGNFGSAAQYMRLIHELGVPNDFRASLRDKYAACQTRGFVDTMPQSVGSICFQSLKVIGSSRF-LRCTVCPALFATDVGIPALSICPCCGVGQV 850
            +IV SSR+ KPSR+  L  +S      P  +KD G D         A L  EP FGL +                             LD+GFS      FTGPV + SDSLVV +G LFRY L    +S  C LP G+  RI++ARD  G+C  AL+FY   E+   +  Y + E   KYVLCT+R + E WNVSE   G+ GCFL   G +D+I ++++SGS  S+ SFA  SS  G   +R  RGVQRFKL       VFR PFA W AVLY+  ++  + +SKNA            + +T+  M       +D TA+ L E E VVDVRWQKLPS+   E Y+GAIMT++RI+FV+ +L   SVF+ Q  +    P  +P+ +WVGP +++  GNS+ +++LN +AD +A +S G  + ALVA LP+RIVY     + +  +L++++R Y  +S  +RGML+  +   R     TD+V  IL+  D SQ S ELT +LI + ++P+AYL++ S +G+ S+ P+RR+  +GR+GD + ALTI+EE+   L          E+F  ++ +     +++  GEF                        GN     +A  +  +G                             L E Q                 N+S  ++F +   T++E G  S      + ++ P+D  +  E++R+                                                                                      N EETRR +   K+     ++E + A  +++ SQR     G    + RA E+ ER   +  D R+ +AQ   +SALR+I RG+ERG   +P+L++ +V Y++  ++R AM++I S  H+ T  G+ TY+QLA  LT L L  + RI+ L+ A DAN+++ NFG+AA  ++ I E+GVP   R  LRDKYA C  RGF +   ++V  +C+++L+        L C VCPA F  D  + +   CP C  G +
Sbjct:  309 LIVNSSRYAKPSRILPLDHDSNMESDHPGVRKDAGQDF--------AVLKCEPAFGLIAASFSNDEKVLVFQPRTNSIGSIRPPLSSGLDTGFSTMPHVAFTGPVTIPSDSLVVHRGSLFRYELKDECVSKICDLPPGDFYRIEIARDQYGYCCAALVFYFADEASYPTQLYEESEDSAKYVLCTRRGDAELWNVSEANEGRAGCFLNEMGREDRIIILANSGSMVSLSSFAPSSSTLGEPPMRPGRGVQRFKLDGRTATQVFRAPFASWTAVLYYSPESQHVCLSKNASSRKRLSHSGESQDSTSITMTEVDLCLEDRTALRLHETETVVDVRWQKLPSKRKHETYLGAIMTEQRIYFVQDMLLALSVFEFQRNIPMDAPLSLPSFSWVGPVVMVISGNSLVAVSLNGRADTIAGISYGRNVSALVAALPDRIVYARPCPERATTALSISSRQYGALSGLLRGMLTLPDEPIRADVRTTDQVYRILELQDVSQGSVELTKTLIAHSMSPVAYLLATSQKGRLSMPPIRRAMFMGRMGDTREALTIIEEQCSRLSHANALHAGSELFRVLQRI---LNVAFATGEFSIGRRCSTLLGRSGTFSAFVDVEGGNAAVKSIADHVHSNGNTALAQFLQTLIEKSSQSSTAMDSSIIPSLTELQKMRRARQTIDFSSISLGNTSTTEIFVASPPTQEEHGSVSPASCSALPQLVPSDMSERLEMSRRVIELEASDYVTAYADLSDDTEVRRQGTGTSAPSLTQNRTVEGGLDDSSDEEAIFQIRSKEPPPHSADANISPETPIENATTGIVERNAEETRRSIRALKDATAGPVQEARQATHELMRSQRLAAVDGQTVPTLRANEMIERGTLRLDDGRYSSAQKHFESALRAISRGKERGQHTSPDLISQLVHYRLFAQVRAAMEDIRSSTHSTTAAGKQTYTQLATALTALPLQQKHRIEALVIAADANMMMNNFGTAAHALQAIKEIGVPETIRPVLRDKYAMCAARGFANAQEEAVPKLCYRTLRTFKPGLVQLSCNVCPAKFLPDASLSSNDTCPICRCGTI 1358          
The following BLAST results are available for this feature:
BLAST of Gchil8935.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IK11_9FLOR0.000e+052.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGX5_CHOCR1.480e-15432.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:225963..229100 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8935.t1Gchil8935.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 225963..229100 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8935.t1 ID=Gchil8935.t1|Name=Gchil8935.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=854bp
MIVPSSRFPKPSRLPSLLDESPLFQKDDGNDRSRKNSRMPATLTTEPTFG
LFSCLDSGFSFKSGDMFTGPVLVDSDSLVVRQGCLFRYGLGMGQLSFCCQ
LPNGEAKRIDVARDADGFCIGALLFYDGESEVDSNSYADPEPPEKYVLCT
KRENENWNVSEPTGGKTGCFLGASGEQDKIFVVSSSGSTASIFSFAAPSS
NPGIQQVRQSRGVQRFKLISGGVRSVFRTPFAQWNAVLYHDCDNNRLVVS
KNAFDADTYRRDSYQEAATAFAMDDDTAVPLRENEIVVDVRWQKLPSRSE
QYIGAIMTDKRIFFVRHILSIHSVFDMQSIMRKVVPFCVPNMAWVGPSIL
LAHGNSVFSIALNSQADLVANLSNGGYLPALVACLPERIVYTTSSLDASQ
CSLAVATRPYSPVSSTVRGMLSFENLKTRRSPDLTDKVKEILDTHDASQA
SAELTDSLIENRLTPLAYLISVSAEGKGSLSPLRRSALLGRLGDFKGALT
ILEEELMVLRREVFHEIESVGEQTGLSYGAGEFDGNMTTVMMAGRLPGDG
LEEEQINSSDDDLFSSTKQETGLQSGNGEGVMQEVTPTDDGDLTEITRKN
TEETRRMLGKQKEKNDAALREMKVAASQMVASQRNLHASGTPSGSTRALE
IFERSVRKYSDKRFVAAQNELDSALRSILRGRERGIGVTPELLNGIVLYQ
MACRIRIAMDEIASGEHANTIPGRVTYSQLANGLTKLLLTVQDRIDGLIQ
AVDANILLGNFGSAAQYMRLIHELGVPNDFRASLRDKYAACQTRGFVDTM
PQSVGSICFQSLKVIGSSRFLRCTVCPALFATDVGIPALSICPCCGVGQV
ISS*
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