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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil8935.t1 ID=Gchil8935.t1|Name=Gchil8935.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=854bp MIVPSSRFPKPSRLPSLLDESPLFQKDDGNDRSRKNSRMPATLTTEPTFG LFSCLDSGFSFKSGDMFTGPVLVDSDSLVVRQGCLFRYGLGMGQLSFCCQ LPNGEAKRIDVARDADGFCIGALLFYDGESEVDSNSYADPEPPEKYVLCT KRENENWNVSEPTGGKTGCFLGASGEQDKIFVVSSSGSTASIFSFAAPSS NPGIQQVRQSRGVQRFKLISGGVRSVFRTPFAQWNAVLYHDCDNNRLVVS KNAFDADTYRRDSYQEAATAFAMDDDTAVPLRENEIVVDVRWQKLPSRSE QYIGAIMTDKRIFFVRHILSIHSVFDMQSIMRKVVPFCVPNMAWVGPSIL LAHGNSVFSIALNSQADLVANLSNGGYLPALVACLPERIVYTTSSLDASQ CSLAVATRPYSPVSSTVRGMLSFENLKTRRSPDLTDKVKEILDTHDASQA SAELTDSLIENRLTPLAYLISVSAEGKGSLSPLRRSALLGRLGDFKGALT ILEEELMVLRREVFHEIESVGEQTGLSYGAGEFDGNMTTVMMAGRLPGDG LEEEQINSSDDDLFSSTKQETGLQSGNGEGVMQEVTPTDDGDLTEITRKN TEETRRMLGKQKEKNDAALREMKVAASQMVASQRNLHASGTPSGSTRALE IFERSVRKYSDKRFVAAQNELDSALRSILRGRERGIGVTPELLNGIVLYQ MACRIRIAMDEIASGEHANTIPGRVTYSQLANGLTKLLLTVQDRIDGLIQ AVDANILLGNFGSAAQYMRLIHELGVPNDFRASLRDKYAACQTRGFVDTM PQSVGSICFQSLKVIGSSRFLRCTVCPALFATDVGIPALSICPCCGVGQV ISS* back to topspliced messenger RNA >Gchil8935.t1 ID=Gchil8935.t1|Name=Gchil8935.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2562bp|location=Sequence derived from alignment at tig00004370_pilon:225963..229100+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGATTGTTCCAAGCTCACGGTTTCCTAAACCTTCCCGCCTACCATCGTT GCTGGACGAATCTCCTTTGTTTCAGAAAGACGATGGAAACGACCGAAGTC GGAAGAATTCCAGAATGCCGGCCACGTTGACGACTGAACCAACTTTTGGT CTGTTTTCATGCCTTGACTCCGGGTTCTCTTTTAAAAGCGGGGATATGTT CACAGGACCTGTCCTTGTCGATTCAGATAGCCTTGTGGTTCGTCAGGGAT GTCTTTTTCGATACGGACTCGGTATGGGGCAACTTTCCTTTTGCTGTCAG TTGCCCAACGGAGAAGCAAAGCGCATTGATGTTGCCCGTGATGCCGACGG GTTTTGCATCGGTGCTCTATTGTTTTACGACGGAGAAAGTGAAGTTGATA GTAACTCTTATGCGGACCCCGAACCTCCAGAAAAATATGTGCTCTGCACA AAGCGTGAGAATGAAAATTGGAACGTCTCGGAGCCTACTGGAGGTAAAAC TGGCTGCTTCCTTGGTGCCTCCGGAGAACAGGATAAAATATTCGTTGTAT CGAGCTCCGGGTCAACTGCTTCGATATTCTCGTTCGCAGCGCCCTCCAGT AACCCTGGGATTCAGCAAGTACGCCAGTCTCGAGGTGTTCAACGTTTCAA ACTGATTAGCGGCGGCGTGAGAAGTGTGTTTCGGACACCATTCGCTCAAT GGAACGCGGTTTTGTATCATGATTGTGATAACAATCGACTAGTCGTATCG AAAAATGCATTTGATGCAGATACATATCGACGTGATTCTTATCAAGAAGC TGCGACAGCATTCGCGATGGACGACGACACGGCTGTTCCACTAAGGGAGA ATGAAATTGTCGTGGATGTACGATGGCAGAAGTTGCCCTCTCGTTCAGAG CAGTATATCGGGGCGATAATGACGGATAAGCGAATCTTTTTTGTGCGCCA TATTCTCAGTATACACTCCGTGTTCGATATGCAAAGCATAATGAGAAAAG TGGTACCTTTTTGCGTTCCCAACATGGCTTGGGTTGGACCATCCATTCTA CTGGCACATGGTAACTCTGTGTTTTCCATAGCTTTGAACAGTCAAGCAGA TCTTGTGGCCAACCTCAGTAATGGAGGGTATCTCCCTGCTTTGGTTGCGT GTTTACCTGAAAGGATTGTATATACGACTTCAAGTCTTGATGCAAGCCAA TGCTCTCTCGCTGTCGCCACGCGGCCATATAGCCCGGTGTCAAGTACAGT CAGGGGTATGCTTTCCTTCGAGAACTTGAAAACTCGCCGATCTCCGGACC TTACTGATAAGGTGAAAGAAATCTTGGATACTCACGATGCATCCCAAGCT TCTGCAGAATTAACTGATTCTCTTATAGAAAATAGACTAACTCCTCTCGC TTATCTCATATCCGTGTCTGCCGAAGGAAAGGGCAGCTTATCGCCATTGC GCCGTTCTGCTCTTCTGGGGAGATTAGGTGACTTCAAAGGTGCTTTGACC ATACTCGAAGAAGAGTTAATGGTCTTGAGACGGGAGGTGTTCCACGAAAT CGAGAGTGTCGGTGAACAAACAGGTTTGTCCTACGGTGCGGGTGAATTTG ATGGAAATATGACAACTGTAATGATGGCAGGTAGGTTGCCCGGTGACGGT TTGGAAGAAGAGCAGATAAATTCTTCTGATGATGATCTGTTTAGCAGCAC AAAACAGGAAACGGGACTACAAAGCGGAAACGGGGAAGGAGTGATGCAAG AAGTAACACCAACGGATGATGGGGATCTAACTGAGATAACAAGGAAGAAC ACGGAGGAGACACGACGCATGCTTGGTAAACAGAAGGAGAAGAATGACGC AGCCCTCAGAGAAATGAAGGTAGCTGCAAGTCAAATGGTGGCATCGCAAC GAAATCTTCATGCGTCAGGAACACCCTCAGGGAGCACGCGCGCCCTTGAA ATTTTCGAACGCTCTGTTCGAAAGTATTCAGACAAGCGCTTCGTTGCAGC GCAAAACGAACTCGACAGCGCACTGCGTTCGATCTTACGTGGCAGAGAAC GTGGGATAGGAGTGACGCCAGAGCTACTCAATGGTATCGTTCTGTATCAG ATGGCGTGCCGAATCCGAATCGCAATGGATGAGATAGCTAGTGGAGAACA TGCCAATACGATTCCAGGAAGAGTAACCTACTCGCAGTTGGCAAATGGAC TAACAAAGCTGCTGCTAACGGTTCAAGACCGCATTGATGGCCTAATACAA GCAGTTGATGCGAACATTCTGCTGGGCAACTTTGGAAGCGCAGCTCAGTA TATGCGACTTATCCATGAACTCGGAGTTCCAAACGATTTCCGGGCTTCTT TGAGGGATAAGTATGCTGCCTGTCAGACAAGAGGATTCGTCGATACTATG CCTCAATCAGTTGGAAGTATATGTTTTCAGAGTTTGAAGGTAATTGGATC ATCACGCTTTCTGCGATGTACGGTTTGTCCGGCGTTGTTCGCTACGGACG TGGGTATTCCAGCGTTGAGTATATGTCCGTGTTGCGGAGTGGGGCAAGTG ATTTCATCGTAG back to topprotein sequence of Gchil8935.t1 >Gchil8935.t1 ID=Gchil8935.t1|Name=Gchil8935.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=854bp
MIVPSSRFPKPSRLPSLLDESPLFQKDDGNDRSRKNSRMPATLTTEPTFG LFSCLDSGFSFKSGDMFTGPVLVDSDSLVVRQGCLFRYGLGMGQLSFCCQ LPNGEAKRIDVARDADGFCIGALLFYDGESEVDSNSYADPEPPEKYVLCT KRENENWNVSEPTGGKTGCFLGASGEQDKIFVVSSSGSTASIFSFAAPSS NPGIQQVRQSRGVQRFKLISGGVRSVFRTPFAQWNAVLYHDCDNNRLVVS KNAFDADTYRRDSYQEAATAFAMDDDTAVPLRENEIVVDVRWQKLPSRSE QYIGAIMTDKRIFFVRHILSIHSVFDMQSIMRKVVPFCVPNMAWVGPSIL LAHGNSVFSIALNSQADLVANLSNGGYLPALVACLPERIVYTTSSLDASQ CSLAVATRPYSPVSSTVRGMLSFENLKTRRSPDLTDKVKEILDTHDASQA SAELTDSLIENRLTPLAYLISVSAEGKGSLSPLRRSALLGRLGDFKGALT ILEEELMVLRREVFHEIESVGEQTGLSYGAGEFDGNMTTVMMAGRLPGDG LEEEQINSSDDDLFSSTKQETGLQSGNGEGVMQEVTPTDDGDLTEITRKN TEETRRMLGKQKEKNDAALREMKVAASQMVASQRNLHASGTPSGSTRALE IFERSVRKYSDKRFVAAQNELDSALRSILRGRERGIGVTPELLNGIVLYQ MACRIRIAMDEIASGEHANTIPGRVTYSQLANGLTKLLLTVQDRIDGLIQ AVDANILLGNFGSAAQYMRLIHELGVPNDFRASLRDKYAACQTRGFVDTM PQSVGSICFQSLKVIGSSRFLRCTVCPALFATDVGIPALSICPCCGVGQV ISS* back to topmRNA from alignment at tig00004370_pilon:225963..229100+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil8935.t1 ID=Gchil8935.t1|Name=Gchil8935.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=3138bp|location=Sequence derived from alignment at tig00004370_pilon:225963..229100+ (Gracilaria chilensis NLEC103_M9 male) ATGATTGTTCCAAGCTCACGGTTTCCTAAACCTTCCCGCCTACCATCGTT
GCTGGACGAATCTCCTTTGTTTCAGAAAGACGATGGAAACGACCGAAGTC
GGAAGAATTCCAGAATGCCGGCCACGTTGACGACTGAACCAACTTTTGGT
CTGTTTTCATGtacgttggataccaccggaaatgtttatgtgttccaatc
atccacttctgatctccccgccatacagagacccatAACTTCAGGCCTTG
ACTCCGGGTTCTCTTTTAAAAGCGGGGATATGTTCACAGGACCTGTCCTT
GTCGATTCAGATAGCCTTGTGGTTCGTCAGGGATGTCTTTTTCGATACGG
ACTCGGTATGGGGCAACTTTCCTTTTGCTGTCAGTTGCCCAACGGAGAAG
CAAAGCGCATTGATGTTGCCCGTGATGCCGACGGGTTTTGCATCGGTGCT
CTATTGTTTTACGACGGAGAAAGTGAAGTTGATAGTAACTCTTATGCGGA
CCCCGAACCTCCAGAAAAATATGTGCTCTGCACAAAGCGTGAGAATGAAA
ATTGGAACGTCTCGGAGCCTACTGGAGGTAAAACTGGCTGCTTCCTTGGT
GCCTCCGGAGAACAGGATAAAATATTCGTTGTATCGAGCTCCGGGTCAAC
TGCTTCGATATTCTCGTTCGCAGCGCCCTCCAGTAACCCTGGGATTCAGC
AAGTACGCCAGTCTCGAGGTGTTCAACGTTTCAAACTGATTAGCGGCGGC
GTGAGAAGTGTGTTTCGGACACCATTCGCTCAATGGAACGCGGTTTTGTA
TCATGATTGTGATAACAATCGACTAGTCGTATCGAAAAATGCATTTGATG
CAGATACATATCGACGTGATTCTTATCAAGAAGCTGCGACAGCATTCGCG
ATGGACGACGACACGGCTGTTCCACTAAGGGAGAATGAAATTGTCGTGGA
TGTACGATGGCAGAAGTTGCCCTCTCGTTCAGAGCAGTATATCGGGGCGA
TAATGACGGATAAGCGAATCTTTTTTGTGCGCCATATTCTCAGTATACAC
TCCGTGTTCGATATGCAAAGCATAATGAGAAAAGTGGTACCTTTTTGCGT
TCCCAACATGGCTTGGGTTGGACCATCCATTCTACTGGCACATGGTAACT
CTGTGTTTTCCATAGCTTTGAACAGTCAAGCAGATCTTGTGGCCAACCTC
AGTAATGGAGGGTATCTCCCTGCTTTGGTTGCGTGTTTACCTGAAAGGAT
TGTATATACGACTTCAAGTCTTGATGCAAGCCAATGCTCTCTCGCTGTCG
CCACGCGGCCATATAGCCCGGTGTCAAGTACAGTCAGGGGTATGCTTTCC
TTCGAGAACTTGAAAACTCGCCGATCTCCGGACCTTACTGATAAGGTGAA
AGAAATCTTGGATACTCACGATGCATCCCAAGCTTCTGCAGAATTAACTG
ATTCTCTTATAGAAAATAGACTAACTCCTCTCGCTTATCTCATATCCGTG
TCTGCCGAAGGAAAGGGCAGCTTATCGCCATTGCGCCGTTCTGCTCTTCT
GGGGAGATTAGGTGACTTCAAAGGTGCTTTGACCATACTCGAAGAAGAGT
ATGCACGTTTGCCCTCATCCGCTGAgtttcatgatggaacagagttgttt
cgaatgatccagcgcactctgaacatggctttcgcggccggggactttgc
agtaggacggcgatgtgctgcgttactgggtcggagagggactttttctg
cgttcgtagacaccgagggaggatacgctgctcttcgttctgtgatatcg
tgtgcccgcatatccaggaacacctatttgcttgaggtcttgcaaccttt
actggggaaaagctcggtaagcagcgttgcgacggattcctcaatgattg
ttaggccgaaagaaaggcagacccttcaaagagcgatcaaagcggtgaat
gcatctgcaatttcactaggggctgtagatcaacatgtggttgtggtaag
aattccatcgggggaggacgcagaaggacgtctgtcgtcggttcagaaga
tgaagttagagcctaacacggcaaaaCATGTCGGTGACAGGTTAATGGTC
TTGAGACGGGAGGTGTTCCACGAAATCGAGAGTGTCGGTGAACAAACAGG
TTTGTCCTACGGTGCGGGTGAATTTGATGGAAATATGACAACTGTAATGA
TGGCAGGTAGGTTGCCCGGTGACGGTTTGGAAGAAGAGCAGATAAATTCT
TCTGATGATGATCTGTTTAGCAGCACAAAACAGGAAACGGGACTACAAAG
CGGAAACGGGGAAGGAGTGATGCAAGAAGTAACACCAACGGATGATGGGG
ATCTAACTGAGATAACAAGGAAGAACACGGAGGAGACACGACGCATGCTT
GGTAAACAGAAGGAGAAGAATGACGCAGCCCTCAGAGAAATGAAGGTAGC
TGCAAGTCAAATGGTGGCATCGCAACGAAATCTTCATGCGTCAGGAACAC
CCTCAGGGAGCACGCGCGCCCTTGAAATTTTCGAACGCTCTGTTCGAAAG
TATTCAGACAAGCGCTTCGTTGCAGCGCAAAACGAACTCGACAGCGCACT
GCGTTCGATCTTACGTGGCAGAGAACGTGGGATAGGAGTGACGCCAGAGC
TACTCAATGGTATCGTTCTGTATCAGATGGCGTGCCGAATCCGAATCGCA
ATGGATGAGATAGCTAGTGGAGAACATGCCAATACGATTCCAGGAAGAGT
AACCTACTCGCAGTTGGCAAATGGACTAACAAAGCTGCTGCTAACGGTTC
AAGACCGCATTGATGGCCTAATACAAGCAGTTGATGCGAACATTCTGCTG
GGCAACTTTGGAAGCGCAGCTCAGTATATGCGACTTATCCATGAACTCGG
AGTTCCAAACGATTTCCGGGCTTCTTTGAGGGATAAGTATGCTGCCTGTC
AGACAAGAGGATTCGTCGATACTATGCCTCAATCAGTTGGAAGTATATGT
TTTCAGAGTTTGAAGGTAATTGGATCATCACGCTTTCTGCGATGTACGGT
TTGTCCGGCGTTGTTCGCTACGGACGTGGGTATTCCAGCGTTGAGTATAT
GTCCGTGTTGCGGAGTGGGGCAAGTGATTTCATCGTAG back to topCoding sequence (CDS) from alignment at tig00004370_pilon:225963..229100+ >Gchil8935.t1 ID=Gchil8935.t1|Name=Gchil8935.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2562bp|location=Sequence derived from alignment at tig00004370_pilon:225963..229100+ (Gracilaria chilensis NLEC103_M9 male) ATGATTGTTCCAAGCTCACGGTTTCCTAAACCTTCCCGCCTACCATCGTT GCTGGACGAATCTCCTTTGTTTCAGAAAGACGATGGAAACGACCGAAGTC GGAAGAATTCCAGAATGCCGGCCACGTTGACGACTGAACCAACTTTTGGT CTGTTTTCATGCCTTGACTCCGGGTTCTCTTTTAAAAGCGGGGATATGTT CACAGGACCTGTCCTTGTCGATTCAGATAGCCTTGTGGTTCGTCAGGGAT GTCTTTTTCGATACGGACTCGGTATGGGGCAACTTTCCTTTTGCTGTCAG TTGCCCAACGGAGAAGCAAAGCGCATTGATGTTGCCCGTGATGCCGACGG GTTTTGCATCGGTGCTCTATTGTTTTACGACGGAGAAAGTGAAGTTGATA GTAACTCTTATGCGGACCCCGAACCTCCAGAAAAATATGTGCTCTGCACA AAGCGTGAGAATGAAAATTGGAACGTCTCGGAGCCTACTGGAGGTAAAAC TGGCTGCTTCCTTGGTGCCTCCGGAGAACAGGATAAAATATTCGTTGTAT CGAGCTCCGGGTCAACTGCTTCGATATTCTCGTTCGCAGCGCCCTCCAGT AACCCTGGGATTCAGCAAGTACGCCAGTCTCGAGGTGTTCAACGTTTCAA ACTGATTAGCGGCGGCGTGAGAAGTGTGTTTCGGACACCATTCGCTCAAT GGAACGCGGTTTTGTATCATGATTGTGATAACAATCGACTAGTCGTATCG AAAAATGCATTTGATGCAGATACATATCGACGTGATTCTTATCAAGAAGC TGCGACAGCATTCGCGATGGACGACGACACGGCTGTTCCACTAAGGGAGA ATGAAATTGTCGTGGATGTACGATGGCAGAAGTTGCCCTCTCGTTCAGAG CAGTATATCGGGGCGATAATGACGGATAAGCGAATCTTTTTTGTGCGCCA TATTCTCAGTATACACTCCGTGTTCGATATGCAAAGCATAATGAGAAAAG TGGTACCTTTTTGCGTTCCCAACATGGCTTGGGTTGGACCATCCATTCTA CTGGCACATGGTAACTCTGTGTTTTCCATAGCTTTGAACAGTCAAGCAGA TCTTGTGGCCAACCTCAGTAATGGAGGGTATCTCCCTGCTTTGGTTGCGT GTTTACCTGAAAGGATTGTATATACGACTTCAAGTCTTGATGCAAGCCAA TGCTCTCTCGCTGTCGCCACGCGGCCATATAGCCCGGTGTCAAGTACAGT CAGGGGTATGCTTTCCTTCGAGAACTTGAAAACTCGCCGATCTCCGGACC TTACTGATAAGGTGAAAGAAATCTTGGATACTCACGATGCATCCCAAGCT TCTGCAGAATTAACTGATTCTCTTATAGAAAATAGACTAACTCCTCTCGC TTATCTCATATCCGTGTCTGCCGAAGGAAAGGGCAGCTTATCGCCATTGC GCCGTTCTGCTCTTCTGGGGAGATTAGGTGACTTCAAAGGTGCTTTGACC ATACTCGAAGAAGAGTTAATGGTCTTGAGACGGGAGGTGTTCCACGAAAT CGAGAGTGTCGGTGAACAAACAGGTTTGTCCTACGGTGCGGGTGAATTTG ATGGAAATATGACAACTGTAATGATGGCAGGTAGGTTGCCCGGTGACGGT TTGGAAGAAGAGCAGATAAATTCTTCTGATGATGATCTGTTTAGCAGCAC AAAACAGGAAACGGGACTACAAAGCGGAAACGGGGAAGGAGTGATGCAAG AAGTAACACCAACGGATGATGGGGATCTAACTGAGATAACAAGGAAGAAC ACGGAGGAGACACGACGCATGCTTGGTAAACAGAAGGAGAAGAATGACGC AGCCCTCAGAGAAATGAAGGTAGCTGCAAGTCAAATGGTGGCATCGCAAC GAAATCTTCATGCGTCAGGAACACCCTCAGGGAGCACGCGCGCCCTTGAA ATTTTCGAACGCTCTGTTCGAAAGTATTCAGACAAGCGCTTCGTTGCAGC GCAAAACGAACTCGACAGCGCACTGCGTTCGATCTTACGTGGCAGAGAAC GTGGGATAGGAGTGACGCCAGAGCTACTCAATGGTATCGTTCTGTATCAG ATGGCGTGCCGAATCCGAATCGCAATGGATGAGATAGCTAGTGGAGAACA TGCCAATACGATTCCAGGAAGAGTAACCTACTCGCAGTTGGCAAATGGAC TAACAAAGCTGCTGCTAACGGTTCAAGACCGCATTGATGGCCTAATACAA GCAGTTGATGCGAACATTCTGCTGGGCAACTTTGGAAGCGCAGCTCAGTA TATGCGACTTATCCATGAACTCGGAGTTCCAAACGATTTCCGGGCTTCTT TGAGGGATAAGTATGCTGCCTGTCAGACAAGAGGATTCGTCGATACTATG CCTCAATCAGTTGGAAGTATATGTTTTCAGAGTTTGAAGGTAATTGGATC ATCACGCTTTCTGCGATGTACGGTTTGTCCGGCGTTGTTCGCTACGGACG TGGGTATTCCAGCGTTGAGTATATGTCCGTGTTGCGGAGTGGGGCAAGTG ATTTCATCGTAG back to top
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