Gchil8923.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8923.t1
Unique NameGchil8923.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length123
Homology
BLAST of Gchil8923.t1 vs. uniprot
Match: A0A2V3IJY3_9FLOR (COX assembly mitochondrial protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJY3_9FLOR)

HSP 1 Score: 199 bits (505), Expect = 6.640e-64
Identity = 92/121 (76.03%), Postives = 109/121 (90.08%), Query Frame = 0
Query:    1 MPSQSSSRISDGEFKDIMQNRSSTDPVPVLIHSAENRVTRELRDLAVKGCDEHVRRLAECAEGKLLSVIWHCRKYSKAVDVCMREFGGDEALKDELRRRHGKKFPRAVKEYRLPDHVTASQ 121
            MP+Q+ + I+D E  D++Q+RS+TDPVP+LIH AENRV RELRD+AV+GC+EHV+RLAECAEGKLLSV+WHCRKYSKAVD CMREFG DEALKDELRRRHGKKFP+AVK Y+LP+ VTA Q
Sbjct:    1 MPTQAQNIITDEELHDLLQSRSNTDPVPILIHRAENRVLRELRDIAVQGCNEHVKRLAECAEGKLLSVVWHCRKYSKAVDACMREFGADEALKDELRRRHGKKFPKAVKGYKLPNSVTADQ 121          
BLAST of Gchil8923.t1 vs. uniprot
Match: R7Q7Y4_CHOCR (COX assembly mitochondrial protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7Y4_CHOCR)

HSP 1 Score: 147 bits (372), Expect = 1.410e-43
Identity = 66/109 (60.55%), Postives = 86/109 (78.90%), Query Frame = 0
Query:    9 ISDGEFKDIMQNRSSTDPVPVLIHSAENRVTRELRDLAVKGCDEHVRRLAECAEGKLLSVIWHCRKYSKAVDVCMREFGGDEALKDELRRRHGKKFPRAVKEYRLPDHV 117
            +S  E +D++  R+S DPVP+L H A+  V R L+D+A++GC+ HVR LAEC+EG+LLSV+WHCR +SKAVD CMRE+G DE LKDELRRRHG K+PRAVK YR   ++
Sbjct:   10 VSQAELEDLVAARASRDPVPILKHKADAVVMRRLKDVALRGCEGHVRTLAECSEGRLLSVVWHCRAFSKAVDQCMREYGADEHLKDELRRRHGAKYPRAVKGYRESSNI 118          
BLAST of Gchil8923.t1 vs. uniprot
Match: A0A5B6UXC1_9ROSI (COX assembly mitochondrial protein n=7 Tax=Gossypium TaxID=3633 RepID=A0A5B6UXC1_9ROSI)

HSP 1 Score: 62.4 bits (150), Expect = 2.380e-10
Identity = 24/66 (36.36%), Postives = 44/66 (66.67%), Query Frame = 0
Query:   35 ENRVTRELRDLAVKGCDEHVRRLAECAEGKLLSVIWHCRKYSKAVDVCMREFGGDEALKDELRRRH 100
            E  +  +++  A+K CDE+  + A+CA GK LS++WHCRK +K ++ C+ +F  D  L +E+++ +
Sbjct:   17 EEALRSKMKQKALKECDEYTSKYAQCAAGKTLSIVWHCRKQAKELNDCLHQFTNDAVL-EEMKKEY 81          
BLAST of Gchil8923.t1 vs. uniprot
Match: A0A5J5BXB7_9ASTE (COX assembly mitochondrial protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BXB7_9ASTE)

HSP 1 Score: 61.6 bits (148), Expect = 4.760e-10
Identity = 23/60 (38.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:   35 ENRVTRELRDLAVKGCDEHVRRLAECAEGKLLSVIWHCRKYSKAVDVCMREFGGDEALKD 94
            E  +  +++  A+K CD++  R AECA G++LSV+W CRK +K ++ C+ ++  D  L+D
Sbjct:   17 EEALRSKMKQKALKECDQYTARYAECASGRMLSVVWQCRKQAKELNGCLHQYTNDSVLED 76          
BLAST of Gchil8923.t1 vs. uniprot
Match: A0A6I9RP53_ELAGV (COX assembly mitochondrial protein n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RP53_ELAGV)

HSP 1 Score: 58.5 bits (140), Expect = 7.520e-9
Identity = 23/66 (34.85%), Postives = 43/66 (65.15%), Query Frame = 0
Query:   35 ENRVTRELRDLAVKGCDEHVRRLAECAEGKLLSVIWHCRKYSKAVDVCMREFGGDEALKDELRRRH 100
            E  +  +++  A+K CD +  + AECA GK +SVIWHCRK +K ++ C+ ++  +  L +E+++ +
Sbjct:   17 EEALRSKMKQKALKECDHYSAKYAECAMGKTISVIWHCRKQAKELNECLHQYTNESVL-EEMKKNY 81          
BLAST of Gchil8923.t1 vs. uniprot
Match: UPI00015C83D6 (uncharacterized protein DDB_G0275933 n=2 Tax=Vitis TaxID=3603 RepID=UPI00015C83D6)

HSP 1 Score: 58.5 bits (140), Expect = 7.520e-9
Identity = 24/72 (33.33%), Postives = 45/72 (62.50%), Query Frame = 0
Query:   35 ENRVTRELRDLAVKGCDEHVRRLAECAEGKLLSVIWHCRKYSKAVDVCMREFGGD----EALKDELRRRHGK 102
            E  +  +++  A+K C+E+  + A+CA GK +SV+WHCRK +K ++ C+ ++  D    E  K+ + ++ GK
Sbjct:   17 EEALRSKMKQKALKECNEYASKYAQCAAGKTISVVWHCRKQAKELNECLHQYTNDTIFEEMKKEYMAQQEGK 88          
BLAST of Gchil8923.t1 vs. uniprot
Match: A0A5B6YQF6_DAVIN (COX assembly mitochondrial protein (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6YQF6_DAVIN)

HSP 1 Score: 59.3 bits (142), Expect = 1.010e-8
Identity = 21/66 (31.82%), Postives = 45/66 (68.18%), Query Frame = 0
Query:   35 ENRVTRELRDLAVKGCDEHVRRLAECAEGKLLSVIWHCRKYSKAVDVCMREFGGDEALKDELRRRH 100
            E  +  ++++ A+K CD++  + AECA G+++SV+W CRK +K ++ C+ ++  D  L +E+++ +
Sbjct:   61 EEALRSKMKEKALKKCDQYTAKYAECASGRMISVVWQCRKQAKELNGCLHQYTNDSVL-EEMKKEY 125          
BLAST of Gchil8923.t1 vs. uniprot
Match: A0A3S4NNQ9_9MAGN (COX assembly mitochondrial protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S4NNQ9_9MAGN)

HSP 1 Score: 58.2 bits (139), Expect = 1.310e-8
Identity = 21/60 (35.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   35 ENRVTRELRDLAVKGCDEHVRRLAECAEGKLLSVIWHCRKYSKAVDVCMREFGGDEALKD 94
            E  +  +++  A+K CD +  + AECA G+ LSV+WHCRK +  ++ C++++  D  L++
Sbjct:   17 EEALRSKMKQKALKECDHYTSKYAECAMGRTLSVVWHCRKEANELNQCLKQYTNDSVLEE 76          
BLAST of Gchil8923.t1 vs. uniprot
Match: A0A438EB00_VITVI (COX assembly mitochondrial protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EB00_VITVI)

HSP 1 Score: 57.4 bits (137), Expect = 1.830e-8
Identity = 23/66 (34.85%), Postives = 43/66 (65.15%), Query Frame = 0
Query:   41 ELRDLAVKGCDEHVRRLAECAEGKLLSVIWHCRKYSKAVDVCMREFGGD----EALKDELRRRHGK 102
            +++  A+K C+E+  + A+CA GK +SV+WHCRK +K ++ C+ ++  D    E  K+ + ++ GK
Sbjct:   17 KMKQKALKECNEYASKYAQCAAGKTISVVWHCRKQAKELNECLHQYTNDTIFEEMKKEYMAQQEGK 82          
BLAST of Gchil8923.t1 vs. uniprot
Match: A0A0C2WXB6_9AGAM (COX assembly mitochondrial protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2WXB6_9AGAM)

HSP 1 Score: 57.4 bits (137), Expect = 2.070e-8
Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = 0
Query:   35 ENRVTRELRDLAVKGCDEHVRRLAECAEGKLLSVIWHCRKYSKAVDVCMREFGGDEALKDELRRRHGKK----FPRAV 108
            E+ + +  +  A++ CD+ V+R AECA G+ +S++W CR   KAV  CM+++   E + +ELRR   K+    FP A 
Sbjct:    9 EDALLKSTKAKALRECDDVVKRFAECATGRTISIVWACRDDHKAVQQCMQQYTNAERM-EELRREFIKQRDATFPTAA 85          
The following BLAST results are available for this feature:
BLAST of Gchil8923.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3IJY3_9FLOR6.640e-6476.03COX assembly mitochondrial protein n=1 Tax=Gracila... [more]
R7Q7Y4_CHOCR1.410e-4360.55COX assembly mitochondrial protein n=1 Tax=Chondru... [more]
A0A5B6UXC1_9ROSI2.380e-1036.36COX assembly mitochondrial protein n=7 Tax=Gossypi... [more]
A0A5J5BXB7_9ASTE4.760e-1038.33COX assembly mitochondrial protein n=1 Tax=Nyssa s... [more]
A0A6I9RP53_ELAGV7.520e-934.85COX assembly mitochondrial protein n=2 Tax=Arecace... [more]
UPI00015C83D67.520e-933.33uncharacterized protein DDB_G0275933 n=2 Tax=Vitis... [more]
A0A5B6YQF6_DAVIN1.010e-831.82COX assembly mitochondrial protein (Fragment) n=1 ... [more]
A0A3S4NNQ9_9MAGN1.310e-835.00COX assembly mitochondrial protein n=1 Tax=Cinnamo... [more]
A0A438EB00_VITVI1.830e-834.85COX assembly mitochondrial protein n=1 Tax=Vitis v... [more]
A0A0C2WXB6_9AGAM2.070e-837.18COX assembly mitochondrial protein n=1 Tax=Serendi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePFAMPF08583Cmc1coord: 41..100
e-value: 4.7E-12
score: 45.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:145655..146123 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8923.t1Gchil8923.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 145655..146123 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8923.t1 ID=Gchil8923.t1|Name=Gchil8923.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=123bp
MPSQSSSRISDGEFKDIMQNRSSTDPVPVLIHSAENRVTRELRDLAVKGC
DEHVRRLAECAEGKLLSVIWHCRKYSKAVDVCMREFGGDEALKDELRRRH
GKKFPRAVKEYRLPDHVTASQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013892Cyt_c_biogenesis_Cmc1-like