Gchil8918.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8918.t1
Unique NameGchil8918.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length137
Homology
BLAST of Gchil8918.t1 vs. uniprot
Match: A0A2V3IJX4_9FLOR (Mitochondrial import inner membrane translocase subunit PAM16 like 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJX4_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 4.270e-46
Identity = 84/115 (73.04%), Postives = 102/115 (88.70%), Query Frame = 0
Query:    1 MASRLIAQILLMGGTYVARAFVQAYQQALVNSARSGGTSASASRAALRGRMSADEASKILGVSRNAGLKEIHGRYDRLFHANDTSKGGSMYLQAKIHFAKVEMERLALERGERLP 115
            MASRL+AQI+LMGGTYVARAFVQAYQQALVNSARSGG +   +RA LRG++ A+EAS+ILGV++NAGLK+I+ RYDRLF AND SKGGS+YLQAKIH AK+E+E+ A+ RGE+ P
Sbjct:    1 MASRLLAQIILMGGTYVARAFVQAYQQALVNSARSGGGAGGTARA-LRGKIGAEEASQILGVTKNAGLKDIYKRYDRLFTANDPSKGGSLYLQAKIHHAKMELEKQAIARGEQPP 114          
BLAST of Gchil8918.t1 vs. uniprot
Match: A0A5J4Z7Y3_PORPP (Mitochondrial import inner membrane translocase subunit tim16 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7Y3_PORPP)

HSP 1 Score: 106 bits (264), Expect = 8.840e-27
Identity = 62/124 (50.00%), Postives = 87/124 (70.16%), Query Frame = 0
Query:    1 MASRLIAQILLMGGTYVARAFVQAYQQALVNSARSGGTSASASRAALRGRMSADEASKILGVSRNAGLKEIHGRYDRLFHANDTSKGGSMYLQAKIHFAKVEMERLALERGERLPEEDNKHSDG 124
            MA+R+IAQI+++GG+ + R FVQAY++AL N+ + G   A A+   +RG+M  D AS+IL +S+++GLKEI  R+ +++ AND SKGGS YLQ KI  A+  +   ALERGER PEE    S G
Sbjct:    1 MAARIIAQIIVVGGSVLLRGFVQAYREALQNAPK-GAAGARAATQRVRGKMDPDMASEILALSKSSGLKEIDERFLKMYQANDPSKGGSQYLQYKIFSARNALVEAALERGERFPEEAQSSSSG 123          
BLAST of Gchil8918.t1 vs. uniprot
Match: A0A7S0ZG57_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZG57_9RHOD)

HSP 1 Score: 97.1 bits (240), Expect = 3.070e-23
Identity = 55/113 (48.67%), Postives = 84/113 (74.34%), Query Frame = 0
Query:    1 MASRLIAQILLMGGTYVARAFVQAYQQALVNSARSGGTSASASRAALRGRMSADEASKILGVSRNAGLKEIHGRYDRLFHANDTSKGGSMYLQAKIHFAKVEMERLALERGER 113
            MASR+IAQIL++GG Y  RAF++AY+QAL  +A +G   A  +  +L+ ++S +EA++IL VS++AGLK+I  ++D+L+ AND SKGGS Y+Q K+  A+  +   A+ERGE+
Sbjct:    2 MASRIIAQILVVGGGYFVRAFIEAYRQAL-QAAPAGAAGARQAAKSLKHKLSLEEAAEILSVSKDAGLKDIAHKFDKLYSANDPSKGGSQYIQYKLLTARNALYDHAIERGEK 113          
BLAST of Gchil8918.t1 vs. uniprot
Match: A0A8H7PEY8_MORIS (Mitochondrial import inner membrane translocase subunit TIM16 n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PEY8_MORIS)

HSP 1 Score: 90.1 bits (222), Expect = 1.860e-20
Identity = 63/123 (51.22%), Postives = 78/123 (63.41%), Query Frame = 0
Query:    1 MASRLIAQILLMGGTYVARAFVQAYQQALVNSARSGG------TSASASRAALRGR-MSADEASKILGVSRNAGLKEIHGRYDRLFHANDTSKGGSMYLQAKIHFAKVEMERLALERGERLPE 116
            M+ RLIAQIL+  GT V RAFV AY+QA  N+A+ GG      T ASA+ A  R   ++ DEA +IL V+R A L E+   YD LF  ND+S GGS YLQ+K+  AK   ER  LER E+L E
Sbjct:    1 MSGRLIAQILVSVGTVVGRAFVAAYKQAAANAAQGGGAAGRAGTKASAADALTRKTGLTMDEACQILNVTREAELAEVAKHYDHLFKVNDSSAGGSFYLQSKVVRAK---ERFELERAEQLKE 120          
BLAST of Gchil8918.t1 vs. uniprot
Match: A0A1X2HAV7_SYNRA (Mitochondrial import inner membrane translocase subunit TIM16 n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HAV7_SYNRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.050e-19
Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 0
Query:    1 MASRLIAQILLMGGTYVARAFVQAYQQALVNSARSGGTSASASRAAL-------RGRMSADEASKILGVSRNAGLKEIHGRYDRLFHANDTSKGGSMYLQAKIHFAKVEMERLALERGE 112
            M+ RLIAQI++  GT V RAFV AY+QA  N+A+ GG +A A   A        +  M+ +EA +IL V+R A L++I   YD LF+ ND+SKGGS YLQ+K+  AK   ER+ LER E
Sbjct:    1 MSGRLIAQIVVSLGTVVGRAFVAAYKQAAANAAQGGGPAARAGAKASAVDALTRKTNMTLEEACQILNVTREADLQQITKNYDHLFNVNDSSKGGSFYLQSKVVRAK---ERIELERAE 116          
BLAST of Gchil8918.t1 vs. uniprot
Match: M1V8E4_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V8E4_CYAM1)

HSP 1 Score: 84.0 bits (206), Expect = 4.050e-18
Identity = 48/118 (40.68%), Postives = 76/118 (64.41%), Query Frame = 0
Query:    1 MASRLIAQILLMGGTYVARAFVQAYQQALVNSARSGGTSASASRAALRGRMSADEASKILGVSRNAGLKEIHGRYDRLFHANDTSKGGSMYLQAKIHFAKVEMERLALERGERLPEED 118
            MAS+++AQ+++ GG ++ R   +AY+QAL N+  +G   ++A+ A  RGRM+ +EA +I+G +     + I  R  RL+  ND   GGS+YLQAK++ A+  +E  AL+R   LP ED
Sbjct:    1 MASKIVAQLIIYGGQFLLRGLAEAYRQALANAQSTGAAQSAAANAVRRGRMTVEEAYRIVGATPGTSPEHIAERLRRLYTLNDPKNGGSLYLQAKVYTAQRTLEE-ALKRSFELPLED 117          
BLAST of Gchil8918.t1 vs. uniprot
Match: A0A0G4IL80_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IL80_PLABS)

HSP 1 Score: 83.6 bits (205), Expect = 4.660e-18
Identity = 49/99 (49.49%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    4 RLIAQILLMGGTYVARAFVQAYQQALVNSARSGGTSASASRA--ALRGRMSADEASKILGVSRNAGLKEIHGRYDRLFHANDTSKGGSMYLQAKIHFAK 100
            RLIAQ+L++G + V++AFVQAYQQA++N+ + GG  ASA+    AL  ++  DEA KIL VS +   +++   Y RLF  ND +KGGS YLQ+KI+ A+
Sbjct:    5 RLIAQLLVVGTSVVSKAFVQAYQQAVLNAGKHGGAKASAASLSQALSRKIHIDEARKILNVSPSVTKEQLEESYKRLFEVNDVNKGGSFYLQSKIYRAR 103          
BLAST of Gchil8918.t1 vs. uniprot
Match: A0A6P5Y1H9_DURZI (mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X1 n=3 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5Y1H9_DURZI)

HSP 1 Score: 80.1 bits (196), Expect = 8.320e-17
Identity = 54/117 (46.15%), Postives = 79/117 (67.52%), Query Frame = 0
Query:    1 MASRLIAQILLMGGTYVARAFVQAYQQALVNSARSGGTSASASRAA--LRGRMSADEASKILGVSRNAGLKEIHGRYDRLFHANDTSKGGSMYLQAKIHFAKVEMERLALERGERLP 115
            MAS+++AQ+++MG   +ARAFVQAY+QAL N+ARSG T  +   AA  +R  M+  EA +IL VS+ +  ++I  +YD LF  N  +K GS YLQ+K++ AK  +ER+   +GE  P
Sbjct:    1 MASKILAQLIIMGSGILARAFVQAYRQALANAARSGITQETLQNAARSVRKVMTEQEARQILSVSKESTWEDIIKKYDVLFENN--AKKGSFYLQSKVYRAKECLERVYGVKGEGNP 115          
BLAST of Gchil8918.t1 vs. uniprot
Match: M2VZB4_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VZB4_GALSU)

HSP 1 Score: 79.7 bits (195), Expect = 1.150e-16
Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 0
Query:    4 RLIAQILLMGGTYVARAFVQAYQQALVNSARSGGTSASASRAALR--GRMSADEASKILGVSRNAGLKEIHGRYDRLFHANDTSKGGSMYLQAKIHFAKVEME 104
            + IAQ+L++GGTY+ RAF++AY+QAL N A   GT+A A+    R  G+MS +EA  ILGVSR+   + I  RY+ L   ND S+GGS YLQ+KI  AK  +E
Sbjct:    5 KFIAQLLIVGGTYLFRAFLEAYKQALYN-AHVRGTAAGAAGQVFREEGKMSVEEACNILGVSRSDSRENILKRYEFLQTVNDPSRGGSPYLQSKIRGAKEILE 106          
BLAST of Gchil8918.t1 vs. uniprot
Match: UPI0010A46CC6 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like n=2 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A46CC6)

HSP 1 Score: 78.2 bits (191), Expect = 4.580e-16
Identity = 48/117 (41.03%), Postives = 73/117 (62.39%), Query Frame = 0
Query:    1 MASRLIAQILLMGGTYVARAFVQAYQQALVNSARSGGTSASASRAALRGR--MSADEASKILGVSRNAGLKEIHGRYDRLFHANDTSKGGSMYLQAKIHFAKVEMERLALERGERLP 115
            MA++++A +++MGG  +ARAFVQAY+QAL N++++G    +      R    M+  EA +ILGV+      EI  RYD LF +N  +K GS YLQ+K+H AK  +E +  ++G   P
Sbjct:    1 MAAKILANLIVMGGGILARAFVQAYRQALANASKNGVAQETIQNTIRRANKVMTEQEARQILGVTEETPWAEIVKRYDNLFESN--AKSGSFYLQSKVHRAKERLEAVHQQKGPDTP 115          
The following BLAST results are available for this feature:
BLAST of Gchil8918.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJX4_9FLOR4.270e-4673.04Mitochondrial import inner membrane translocase su... [more]
A0A5J4Z7Y3_PORPP8.840e-2750.00Mitochondrial import inner membrane translocase su... [more]
A0A7S0ZG57_9RHOD3.070e-2348.67Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A8H7PEY8_MORIS1.860e-2051.22Mitochondrial import inner membrane translocase su... [more]
A0A1X2HAV7_SYNRA1.050e-1948.74Mitochondrial import inner membrane translocase su... [more]
M1V8E4_CYAM14.050e-1840.68Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A0G4IL80_PLABS4.660e-1849.49Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A6P5Y1H9_DURZI8.320e-1746.15mitochondrial import inner membrane translocase su... [more]
M2VZB4_GALSU1.150e-1650.49Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
UPI0010A46CC64.580e-1641.03mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF03656Pam16coord: 1..121
e-value: 3.5E-22
score: 78.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..136
NoneNo IPR availablePANTHERPTHR12388:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM16coord: 1..112
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..136
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 51..113
e-value: 5.6E-16
score: 60.0
IPR005341Mitochondrial import inner membrane translocase subunit Tim16PANTHERPTHR12388MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULEcoord: 1..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:114337..114747 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8918.t1Gchil8918.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 114337..114747 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8918.t1 ID=Gchil8918.t1|Name=Gchil8918.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=137bp
MASRLIAQILLMGGTYVARAFVQAYQQALVNSARSGGTSASASRAALRGR
MSADEASKILGVSRNAGLKEIHGRYDRLFHANDTSKGGSMYLQAKIHFAK
VEMERLALERGERLPEEDNKHSDGCGRNDPDSGESR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036869J_dom_sf
IPR005341Tim16