Gchil8909.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8909.t1
Unique NameGchil8909.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length479
Homology
BLAST of Gchil8909.t1 vs. uniprot
Match: A0A2V3J0V9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0V9_9FLOR)

HSP 1 Score: 261 bits (667), Expect = 3.130e-78
Identity = 177/480 (36.88%), Postives = 263/480 (54.79%), Query Frame = 0
Query:    1 MSLFEGIDVTPQSTLSTIQFSNEAINTVITSLLTTLVIANLGSLINRLVFLSNRDSFSYTSFCRSFIFINSDDPLRLLSWFRGRYEY--------KHSQQQSSTQQKIQGRRLITPLLARIALLIVGIGSIALALPSEKRLDACSRRD---QALIQIPLPSDEQLVVDPQQLLKVCSQIPLRTQLGTVRSSASYCSVTGLPVSLSFINNFEQVATQVQTPGFIGTAYSNDTGALVSLIFSGDSVQALNSFVEWKTE-DDKLFRSIMPIYNGERHLDVLAQSLSQATGQQCRRDFTITNNTDAGVFFVSTLDCQF--EANDAITYVAAGVRESLRFQEQSNVALRIPVDGVVKQI--DRICAIDVSVTRPLINIVPLAVGLLFAFCLNMAVAITVSHRGNAMDAAFHIVREILGHDTSANPLQTNRELDDVQMVALQKFLCADGISAHVGFVQGVGDIAVREIGAERVVGRCMQVACRGLR 464
            M L  G+D TP  T+STIQF NE +NTV TSL+   ++ NLGS+INRLVF+S++  F+Y SF R+FIF++SDD  RL  W++G+  Y            +      ++Q RRL+ P+ ARI L++  I SIAL +P +K   +C R D   Q     P  S+E   V    L ++C  IP+ T+ G V S  SYCS T LP+  + +  FE+    +         Y    G L+S          + SFVEW+   +  ++RS +  ++ ERHL V A+ +S+   + C    T  ++       +  L C    +     + VA  VR+SL + +  +   R  + G   +I   R C + +SV RP++NIVPL V L+  + LN AV  TVSH+G+ MDA F +V+E LGHD ++NPL+ +    +V ++ LQ+F CADG SAH+GF++G GD  V E    ++V +C Q   +G R
Sbjct:    1 MGLEGGVDYTPLLTISTIQFENEVVNTVATSLIVVFLLTNLGSIINRLVFISDKTQFNYRSFLRAFIFMHSDDITRLAYWWKGKNPYLSLLNPGGSGGGRAQRMLNRVQRRRLLLPVCARILLVVSSIASIALTIPGKKTFSSCGRADYEPQMGSVSPNFSEEPGGV----LTRLCRDIPINTKRGDVSSKVSYCS-TVLPLDTNAL--FEESTAVI-------AGYWEQGGLLISGYTVNGRSNLVLSFVEWQRGVNGNIYRSHIRQWSPERHLGVCAEGISRDRNRACTIQSTRNDSIQGVGVTLGLLSCDDAPDLQSGSSLVAGAVRDSLGWVKFRSTIQRSKLTGGEFRIPQQRECPVVISVERPVVNIVPLLVALVMMYTLNYAVNETVSHKGDIMDALFLLVKETLGHDCTSNPLEDSGGEKEVDVLQLQRFECADGRSAHIGFLRGRGDRVVEEFSDGKLVHQCYQTRAQGPR 466          
BLAST of Gchil8909.t1 vs. uniprot
Match: R7QQN3_CHOCR (Uncharacterized protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QQN3_CHOCR)

HSP 1 Score: 244 bits (622), Expect = 6.740e-71
Identity = 173/478 (36.19%), Postives = 261/478 (54.60%), Query Frame = 0
Query:    1 MSLFEGIDVTPQSTLSTIQFSNEAINTVITSLLTTLVIANLGSLINRLVFLSNRDSFSYTSFCRSFIFINSDDPLRLLSWFRGRYEYKHSQQQSSTQQKIQGRRLITPLLARIALLIVGIGSIALALPSEKRLDACSRRDQALIQIPLPSDEQLVVDPQQLLKVCSQIPLRTQLGTVRSSASYCSV-----TGLPVSLSFINNFEQVATQVQTPGFIGTAYSNDTGALVSLIFSGDSVQALNSFVEW-----KTEDDK--LFRSIMPIYNGERHLDVLAQSLSQATGQQCRRDFT---ITNNTDAGVFFVSTLDCQFEANDAITYVAAGVRESL-----RFQEQSNVALRIPVDGVVKQIDRICAIDVSVTRPLINIVPLAVGLLFAFCLNMAVAITVSHRGNAMDAAFHIVREILGHDTSANPLQTNRELDDVQMVALQKFLCADGISAHVGFVQGVGDIAVREIGAERVVGRCMQV 458
            M+L + ++ TP  + ST+Q S++ IN +I SLLT  VI+N+ S+ ++L+F S   SF Y S+ RSFIF+NSDDP+R+ SW   RY YK     +  + +IQ RRL+ PLLAR+ +L+  I S+A+++PSEKRL  C + D       +  D  +      L +VC+ IPL T LG VRS  SYCS      + +PVS              +  G I T  + ++G L + + S +   A   +++W     + ++DK  LF ++  I + + HL V+A +L   T QQC    T   + +  ++ +     LDC F+    I  V A V  SL     R  E  N     P+   V++    C IDV V+RP++NI+PLA+ L+    +N+ V+I  S RGNA D  FHI++E LGHDT++NPL+ N    +   + L+K+ C  G +AH GF+   GD+ V+   +   V  C QV
Sbjct:    1 MTLLQELNATPDFSFSTVQTSSDIINALIISLLTVFVISNILSVTSKLIFSSREKSFEYLSWVRSFIFVNSDDPIRIFSWIWHRYSYKEKGC-TRYRNEIQLRRLLLPLLARLFILVTAITSVAISIPSEKRLSGCEKGD-----FRIHMDPNVRKPAPDLNRVCADIPLTTTLGEVRSRVSYCSCLVDFGSNVPVS--------------EGEGGIVTI-TTESGQLWTALVSKNKTAASAFYIQWVKNRRQRDNDKSLLFTNVEKI-DSDDHLQVIANALRSETVQQCTAKGTSDKLPSEDNSLIAKAQILDCDFDPLSLIARVQAYVTGSLTLNKLRRGEMDNRLELNPLTDEVRE-TAACPIDVVVSRPIVNILPLALMLVLWGIINVLVSIYTSRRGNAFDMGFHIIKEALGHDTTSNPLEENSNRGEAMELPLRKWRCGAG-AAHEGFIGRDGDVPVQGFDSFTNVCGCTQV 454          
BLAST of Gchil8909.t1 vs. uniprot
Match: A0A2V3II47_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II47_9FLOR)

HSP 1 Score: 211 bits (538), Expect = 5.260e-60
Identity = 155/471 (32.91%), Postives = 227/471 (48.20%), Query Frame = 0
Query:    1 MSLFEGIDVTPQSTLSTIQFSNEAINTVITSLLTTLVIANLGSLINRLVFLSNRDSFSYTSFCRSFIFINSDDPLRLLSWFRGRYEYKHSQQQSSTQQKIQGRRLITPLLARIALLIVGIGSIALALPSEKRLDACSRRDQALIQIPLPSDEQLVVDPQQLLKVCSQIPLRTQLGTVRSSASYCSVTGLPVSLSFINNFEQVATQVQTPGFIGTAYSNDTGALVSLIFSGDSVQALNSFVEWKTEDDKLFRSIMPIYNGERHLDVLAQSLSQATGQQC--RRDFTITNNTDAGVFFVSTLDCQFEANDAITYVAAGVRESLRFQEQSNVALRIP--VDGVVKQIDRICAIDVSVTRPLINIVPLAVGLLFAFCLNMAVAITVSHRGNAMDAAFHIVREILGHDTSANPLQTNRELDDVQMVALQKFLCADGISAHVGFVQGVGDIAVREIGAERVVGRCMQVACRGLRFVK 467
            MS+ EG+   P  TLSTIQFS++ +N+++ +L+TT++IAN  S++N+LV +S +D FS+ S+ R+F+F NSDDP    S  RGRY +      S TQ K++ + LI PL AR                                     SD   VV   + L+V                                            PG +        GAL S++ S   V  L   V+W   +  +F S +  Y    HL VLA ++ Q T   C  RR   I+++ + GVF  S LDC F      + +   + +SL FQEQ  VALR     +G      R CA ++++ RPL+N++ L +G + AF +N   A  +S R +     FH+VRE+LGHDT ANPLQ  +E +  Q V +++F+C +  SAHV F++G GD  V+ +   R V  C Q+AC G R V+
Sbjct:   22 MSIEEGLKFNPNLTLSTIQFSSDNLNSIVAALITTIIIANPQSIVNKLVAVSKQDVFSFNSYRRAFVFANSDDPSLGFSCLRGRYGFGFGNG-SHTQLKLRKKLLIVPLFARY------------------------------------SDFAKVVSKTEELRV--------------------------------------------PGLLMAGQDLKIGALFSVLVSCKKVVVLGFGVKWAMPNGDVFHSKVSNYESYVHLGVLADAVRQPTKSTCEIRRVEPISDSAN-GVFMAS-LDCAFPPEKEFSTLLVAMTKSLHFQEQEEVALRHRRFANGSSVMDSRTCAAEITINRPLMNLILLVIGAVAAFAVNKTTAALLSCRADVTHLGFHMVRELLGHDTRANPLQHGKEQEQDQRVTIRRFVCINEESAHVCFMEGDGDRVVQHLEDSRHVACCSQIACVGRRLVR 409          
BLAST of Gchil8909.t1 vs. uniprot
Match: A0A2V3II31_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II31_9FLOR)

HSP 1 Score: 162 bits (409), Expect = 1.450e-42
Identity = 99/283 (34.98%), Postives = 148/283 (52.30%), Query Frame = 0
Query:  189 LPVSLSFINNFEQVATQVQTPGFIGTAYSNDTGALVSLIFSGDSVQALNSFVEWKTEDDKLFRSIMPIYNGERHLDVLAQSLSQATGQQC--RRDFTITNNTDAGVFFVSTLDCQFEANDAITYVAAGVRESLRFQEQSNVALRIPV--DGVVKQIDRICAIDVSVTRPLINIVPLAVGLLFAFCLNMAVAITVSHRGNAMDAAFHIVREILGHDTSANPLQTNRELDDVQMVALQKFLCADGISAHVGFVQGVGDIAVREIGAERVVGRCMQVACRGLRFVK 467
            LP+  S          +++ PG +        GAL S++ S   V  L   V+W   +  +F S +  Y    HL VLA ++ Q     C  RR   I+++ +  V  +++LDC F     +  V   V +SL  QEQ  VALR     +G      R  A ++++ RPL+N++ L +G + AF +N   A  +S R +     FH+VRE+LGHDT ANPLQ  +E +  Q V +Q+F+C +G SAHVGF++G GD  V+ +   R V  C Q+AC G R V+
Sbjct:    6 LPIIDSDFAKVVSKTEELRVPGLLMAVQDLKIGALFSVLVSSKKVVVLGFGVKWAMPNGDVFHSKVSNYESYVHLGVLADAVRQPNNSTCEIRRVEPISDSANGVV--MASLDCAFPPEKVLNTVLVAVTKSLHLQEQEEVALRHRTFANGSSVMDSRTWAAEITIKRPLMNLILLVIGAVAAFAVNKTTAALLSSRADVTHLGFHMVRELLGHDTRANPLQHGKEQEQDQRVTMQRFVCINGESAHVGFMEGDGDRVVQHLENIRHVACCSQIACEGRRLVR 286          
BLAST of Gchil8909.t1 vs. uniprot
Match: R7QI75_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI75_CHOCR)

HSP 1 Score: 155 bits (391), Expect = 5.100e-40
Identity = 107/290 (36.90%), Postives = 164/290 (56.55%), Query Frame = 0
Query:    1 MSLFEGIDVTPQSTLSTIQFSNEAINTVITSLLTTLVIANLGSLINRLVFLSNRDSFSYTSFCRSFIFINSDDPLRLLSWFRGRYEYKHSQQQSSTQQKIQGRRLITPLLARIALLIVGIGSIALALPSEKRLDACSRRDQALIQIPLPSDEQLVVDPQQLLKVCSQIPLRTQLGTVRSSASYCSV-----TGLPVSLSFINNFEQVATQVQTPGFIGTAYSNDTGALVSLIFSGDSVQALNSFVEW-----KTEDDK--LFRSIMPIYNGERHLDVLAQSLSQATGQQC 278
            M+L + ++ TP  + ST+Q S++ IN +I SLLT  VI+N+ S+ ++L+F S   SF Y S+ RSFIF+NSDDP+R+ SW   RY YK     +  + +IQ RRL+ PLLAR+ +L+  I S+A+++PSEKRL  C + D       +  D  +      L +VC+ IPL T LG VRS  SYCS      + +PVS              +  G I T  + ++G L + + S ++  A   +++W     + ++DK  LF ++  I + + HL V+A +L   T QQC
Sbjct:    1 MTLLQELNATPDFSFSTVQTSSDIINALIISLLTVFVISNILSVTSKLIFSSREKSFEYLSWVRSFIFVNSDDPIRIFSWIWHRYSYKEKGC-TRYRNEIQLRRLLLPLLARLFILVTAITSVAISIPSEKRLSGCEKGD-----FRIHMDPNVRKPAPDLNRVCADIPLTTTLGEVRSRVSYCSCLVDFGSNVPVS--------------EGEGGIVTI-TTESGQLWTALVSKNNTAASAFYIQWVKNRRQRDNDKSLLFTNVEKI-DSDDHLQVIANALRSETVQQC 268          
The following BLAST results are available for this feature:
BLAST of Gchil8909.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J0V9_9FLOR3.130e-7836.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQN3_CHOCR6.740e-7136.19Uncharacterized protein n=3 Tax=Chondrus crispus T... [more]
A0A2V3II47_9FLOR5.260e-6032.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II31_9FLOR1.450e-4234.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QI75_CHOCR5.100e-4036.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..356
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 379..478
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 357..378
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 357..379

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:22164..23600 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8909.t1Gchil8909.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 22164..23600 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8909.t1 ID=Gchil8909.t1|Name=Gchil8909.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=479bp
MSLFEGIDVTPQSTLSTIQFSNEAINTVITSLLTTLVIANLGSLINRLVF
LSNRDSFSYTSFCRSFIFINSDDPLRLLSWFRGRYEYKHSQQQSSTQQKI
QGRRLITPLLARIALLIVGIGSIALALPSEKRLDACSRRDQALIQIPLPS
DEQLVVDPQQLLKVCSQIPLRTQLGTVRSSASYCSVTGLPVSLSFINNFE
QVATQVQTPGFIGTAYSNDTGALVSLIFSGDSVQALNSFVEWKTEDDKLF
RSIMPIYNGERHLDVLAQSLSQATGQQCRRDFTITNNTDAGVFFVSTLDC
QFEANDAITYVAAGVRESLRFQEQSNVALRIPVDGVVKQIDRICAIDVSV
TRPLINIVPLAVGLLFAFCLNMAVAITVSHRGNAMDAAFHIVREILGHDT
SANPLQTNRELDDVQMVALQKFLCADGISAHVGFVQGVGDIAVREIGAER
VVGRCMQVACRGLRFVKEGTDKGVGSSV*
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