Gchil8862.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8862.t1
Unique NameGchil8862.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length209
Homology
The following BLAST results are available for this feature:
BLAST of Gchil8862.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..167
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 191..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 57..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..190
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..89
NoneNo IPR availableTMHMMTMhelixcoord: 112..134
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 168..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000120_piloncontigtig00000120_pilon:54377..55003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8862.t1Gchil8862.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000120_pilon 54377..55003 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8862.t1 ID=Gchil8862.t1|Name=Gchil8862.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=209bp
MSDAVLIDLHRPFTQYASQAPPPPPPRPHPFRQHTLWAAAALFFSSYLAL
VLYLFLTSDAFRHFVVARANALFALPYVLSLLVVLLCLAPCAPAPPRAQL
DAVITSPADCCLVLLVLLEWATCLALVLVTLVAVHDHLSYVSPDGLIIPV
VQDVPPDAKPADGISRNALVILLIPLLLMYTLFNFLLHFFSCVQGAWRSR
VGLDDLDV*
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