Gchil8853.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8853.t1
Unique NameGchil8853.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length240
Homology
BLAST of Gchil8853.t1 vs. uniprot
Match: A0A3S1D7A5_9BACL (DNA helicase n=3 Tax=Paenibacillus TaxID=44249 RepID=A0A3S1D7A5_9BACL)

HSP 1 Score: 82.0 bits (201), Expect = 2.800e-14
Identity = 51/151 (33.77%), Postives = 74/151 (49.01%), Query Frame = 0
Query:   21 QIMSATSAFGTGIDSSFVRSVVHVGFSRSVMEYIQESGRAGRDGEPGRCVLLFNETFLKRYEQVIKYEPPESTNVGNSWDGKENDSRGISMNISQSIKPHFIR-GNLENANESWKMQDAPCCYGCGLPLKFESSETHPSRD-QIGSRCLVK 169
            ++M AT+AFG GID S VR V+H    +++  Y+QE+GRAGRDGEP  C+LLF+   +   + +I+  P E        D K ND R +   I        +R   LE   E    +    C  C    + E   T  +RD Q+   C+ +
Sbjct:  287 RVMVATNAFGMGIDKSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSECILLFSAQDIMTQKFLIEQNPQEG-------DRKRNDYRKLQQMIEYCYSNRCLRFAMLEYFGEEHDQKPCGICSSC----RDERELTDMTRDAQVIFSCIYR 426          
BLAST of Gchil8853.t1 vs. uniprot
Match: UPI0005648FD2 (RecQ family zinc-binding domain-containing protein n=1 Tax=Paenibacillus zanthoxyli TaxID=369399 RepID=UPI0005648FD2)

HSP 1 Score: 78.2 bits (191), Expect = 2.810e-14
Identity = 43/125 (34.40%), Postives = 66/125 (52.80%), Query Frame = 0
Query:   21 QIMSATSAFGTGIDSSFVRSVVHVGFSRSVMEYIQESGRAGRDGEPGRCVLLFNETFLKRYEQVIKYEPPESTNVGNSWDGKENDSRGISMNISQSIKPHFIRGN-LENANESWKMQDAPCCYGC 144
            ++M AT+AFG GID S VR V+H    +++  Y+QE+GRAGRDGEP +C+LLF+   +   + +I+  P +S       + K ND R +   I        +R   L+   E+   +    C  C
Sbjct:   27 RVMVATNAFGMGIDKSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSQCILLFSAQDIMTQKFLIEQNPQDS-------ERKANDYRKLQQMIEYCYTTRCLRSAMLDYFGEAHGDKSCGICSSC 144          
BLAST of Gchil8853.t1 vs. uniprot
Match: UPI001B0347EA (DNA helicase RecQ n=4 Tax=Paenibacillus TaxID=44249 RepID=UPI001B0347EA)

HSP 1 Score: 81.6 bits (200), Expect = 3.780e-14
Identity = 43/125 (34.40%), Postives = 65/125 (52.00%), Query Frame = 0
Query:   21 QIMSATSAFGTGIDSSFVRSVVHVGFSRSVMEYIQESGRAGRDGEPGRCVLLFNETFLKRYEQVIKYEPPESTNVGNSWDGKENDSRGISMNISQSIKPHFIR-GNLENANESWKMQDAPCCYGC 144
            ++M AT+AFG GID S VR V+H    +++  Y+QE+GRAGRDGEP  C+LLF+   +   + +I+  P +        + K ND R +   +     P+ +R G L+   E         C  C
Sbjct:  287 RVMVATNAFGMGIDKSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSECILLFSPQDIMTQKFLIEQNPQDG-------ERKHNDYRKLQQMVEYCYSPNCLRWGMLDYFGERHDRTPCGICSSC 404          
BLAST of Gchil8853.t1 vs. uniprot
Match: A0A259TES7_9BACL (DNA helicase n=12 Tax=Paenibacillus TaxID=44249 RepID=A0A259TES7_9BACL)

HSP 1 Score: 81.6 bits (200), Expect = 3.780e-14
Identity = 47/127 (37.01%), Postives = 69/127 (54.33%), Query Frame = 0
Query:   21 QIMSATSAFGTGIDSSFVRSVVHVGFSRSVMEYIQESGRAGRDGEPGRCVLLFNETFLKRYEQVIKYEPPESTNVGNSWDGKENDSRGISMNISQSIKPHFIRGN-LENANESWKMQDAPC--CYGC 144
            ++M AT+AFG GID S VR V+H    +++  Y+QE+GRAGRDGEP +C+LLF+   +   + +I+  P E+       D K ND R +   +        +R   L+   ES   +D PC  C  C
Sbjct:  287 RVMVATNAFGMGIDKSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSQCILLFSPQDIITQKFLIEQNPQET-------DRKSNDYRKLQQMVDYCYTTRCLRSAMLDYFGESH--EDKPCGICSSC 404          
BLAST of Gchil8853.t1 vs. uniprot
Match: A0A182JXC6_9DIPT (DNA helicase n=1 Tax=Anopheles christyi TaxID=43041 RepID=A0A182JXC6_9DIPT)

HSP 1 Score: 81.6 bits (200), Expect = 4.320e-14
Identity = 51/162 (31.48%), Postives = 79/162 (48.77%), Query Frame = 0
Query:   11 SLGKRKVLM-------FQIMSATSAFGTGIDSSFVRSVVHVGFSRSVMEYIQESGRAGRDGEPGRCVLLFNETFLKRYEQVIKYEPPESTNVGNSWDGKENDSRGISMNISQSIKPHFIRGNLENANESWKMQDAP--CCYGCGLPLKFESSETHPSRDQIG 163
            SL +RK ++        +I+ AT AFG GID   VR V+H G S+ +  Y QE+GRAGRDG+P RC++ +++   K +E  ++ E P S  V     G++        +  +    ++  G +  AN+S K    P  CC  C      +  E +   D  G
Sbjct:  286 SLSRRKEVLESFLTDRTRIIVATIAFGMGIDKPDVRLVIHYGASKDLESYYQEAGRAGRDGQPARCIIFWSKGDFKTHE-FLRAEIPSSIKVNQEQLGRKMAEYVELRDCRRRFILNYFEGVMPEANKSEKSSSVPQRCCDNCTRGGVAKDCERYEGLDSEG 446          
BLAST of Gchil8853.t1 vs. uniprot
Match: A0A1I0I9R6_9BACL (DNA helicase n=1 Tax=Paenibacillus sp. NFR01 TaxID=1566279 RepID=A0A1I0I9R6_9BACL)

HSP 1 Score: 81.3 bits (199), Expect = 5.100e-14
Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = 0
Query:   21 QIMSATSAFGTGIDSSFVRSVVHVGFSRSVMEYIQESGRAGRDGEPGRCVLLFNETFLKRYEQVIKYEPPESTNVGNSWDGKENDSRGISMNISQSIKPHFIR-GNLENANESWKMQDAPCCYGC 144
            +++ AT+AFG GID S VR V+H    +++  Y+QE+GRAGRDGEP  C+LLF+   +   + +I+  P +S       D K N+ R +   I        +R   LE   E+   +D   C  C
Sbjct:  287 RVIVATNAFGMGIDKSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSECILLFSAQDIMTQKFLIEQNPQDS-------DRKANEYRKLQQMIDYCYTTRCLRTAQLEYFGETHGAKDCGICSSC 404          
BLAST of Gchil8853.t1 vs. uniprot
Match: A0A5J5GJP6_9BACL (DNA helicase n=1 Tax=Paenibacillus spiritus TaxID=2496557 RepID=A0A5J5GJP6_9BACL)

HSP 1 Score: 80.9 bits (198), Expect = 6.930e-14
Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 0
Query:   21 QIMSATSAFGTGIDSSFVRSVVHVGFSRSVMEYIQESGRAGRDGEPGRCVLLFNETFLKRYEQVIKYEPPESTNVGNSWDGKENDSRGISMNISQSIKPHFIRGN-LENANESWKMQDAPC--CYGC 144
            ++++AT+AFG GID S VR V+H    +++  Y+QE+GRAGRDGEP  C+LLF+   +   + +I+  P +S       + K+ND R +   I        +R   L+   E  +  DAPC  C  C
Sbjct:  288 RVIAATNAFGMGIDKSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSSCILLFSAQDIMTQKFLIEQNPQDS-------ERKQNDYRKLQQMIDYCYTTRCLRSAMLDYFGE--EHDDAPCGKCSSC 405          
BLAST of Gchil8853.t1 vs. uniprot
Match: UPI001C11F6C4 (DNA helicase RecQ n=1 Tax=Butyricicoccus sp. MSJd-7 TaxID=2841509 RepID=UPI001C11F6C4)

HSP 1 Score: 79.7 bits (195), Expect = 1.700e-13
Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 0
Query:   14 KRKVLMFQI--MSATSAFGTGIDSSFVRSVVHVGFSRSVMEYIQESGRAGRDGEPGRCVLLFNETFLKRYEQVIKYEP--PESTNVGNSWDGKENDSRGISMN----ISQSIKPHFI 122
            +RK L  +I  ++AT+AFG GI+ + VR VVH G  R++  Y QE+GRAGRDGEP  C++LF+E  +  +E +I+ +P  P  T+    W  K+N  R   M       Q ++ H +
Sbjct:  271 QRKFLSGEIPVITATNAFGMGINKADVRFVVHFGMPRNLESYYQEAGRAGRDGEPAHCLMLFDEADIGLHEYLIRQDPENPALTDEKVVWLKKQNLRRLEQMKRYVFTEQCLRQHIL 387          
BLAST of Gchil8853.t1 vs. uniprot
Match: UPI001E336882 (DNA helicase RecQ n=2 Tax=unclassified Paenibacillus TaxID=185978 RepID=UPI001E336882)

HSP 1 Score: 79.7 bits (195), Expect = 1.710e-13
Identity = 44/124 (35.48%), Postives = 69/124 (55.65%), Query Frame = 0
Query:   21 QIMSATSAFGTGIDSSFVRSVVHVGFSRSVMEYIQESGRAGRDGEPGRCVLLFNETFLKRYEQVIKYEPPESTNVGNSWDGKENDSRGISMNISQSIKPHFIRGNLENANESWKMQDAPCCYGC 144
            ++M AT+AFG GID S VR V+H    +++  Y+QE+GRAGRDGEP  C+LLFN   +   + +I+       N G S + K+N+ R +   +     P  ++G +   +    MQ++  C  C
Sbjct:  287 RVMIATNAFGMGIDKSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSECILLFNPQDILTQKFLIEQ------NEGLSPERKKNEYRKLQTMVDYCYTPKCLQGAI--LDYFGDMQESEPCGKC 402          
BLAST of Gchil8853.t1 vs. uniprot
Match: A0A2S0U7X4_9BACL (DNA helicase n=1 Tax=Paenibacillus sp. CAA11 TaxID=1532905 RepID=A0A2S0U7X4_9BACL)

HSP 1 Score: 79.3 bits (194), Expect = 2.330e-13
Identity = 43/125 (34.40%), Postives = 64/125 (51.20%), Query Frame = 0
Query:   21 QIMSATSAFGTGIDSSFVRSVVHVGFSRSVMEYIQESGRAGRDGEPGRCVLLFNETFLKRYEQVIKYEPPESTNVGNSWDGKENDSRGISMNISQSIKPHFIRGN-LENANESWKMQDAPCCYGC 144
            ++M AT+AFG GID S VR V+H    +++  Y+QE+GRAGRDGEP  C+LLF+   +   + +I+  P +        D K ND R +   +        +R + LE   E    +    C  C
Sbjct:  287 RVMVATNAFGMGIDKSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSDCILLFSPQDIMTQKFLIEQNPQDE-------DRKRNDYRKLQQMVEYCYSNRCLRWSMLEYFGEKHDQKPCGICSSC 404          
The following BLAST results are available for this feature:
BLAST of Gchil8853.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3S1D7A5_9BACL2.800e-1433.77DNA helicase n=3 Tax=Paenibacillus TaxID=44249 Rep... [more]
UPI0005648FD22.810e-1434.40RecQ family zinc-binding domain-containing protein... [more]
UPI001B0347EA3.780e-1434.40DNA helicase RecQ n=4 Tax=Paenibacillus TaxID=4424... [more]
A0A259TES7_9BACL3.780e-1437.01DNA helicase n=12 Tax=Paenibacillus TaxID=44249 Re... [more]
A0A182JXC6_9DIPT4.320e-1431.48DNA helicase n=1 Tax=Anopheles christyi TaxID=4304... [more]
A0A1I0I9R6_9BACL5.100e-1435.20DNA helicase n=1 Tax=Paenibacillus sp. NFR01 TaxID... [more]
A0A5J5GJP6_9BACL6.930e-1436.22DNA helicase n=1 Tax=Paenibacillus spiritus TaxID=... [more]
UPI001C11F6C41.700e-1339.32DNA helicase RecQ n=1 Tax=Butyricicoccus sp. MSJd-... [more]
UPI001E3368821.710e-1335.48DNA helicase RecQ n=2 Tax=unclassified Paenibacill... [more]
A0A2S0U7X4_9BACL2.330e-1334.40DNA helicase n=1 Tax=Paenibacillus sp. CAA11 TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 20..63
e-value: 2.0E-7
score: 31.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..107
score: 11.016829
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 4..145
e-value: 8.3E-21
score: 76.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 21..109
NoneNo IPR availablePANTHERPTHR13710:SF105BLOOM SYNDROME PROTEINcoord: 20..91
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 20..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000120_piloncontigtig00000120_pilon:24384..25844 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8853.t1Gchil8853.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000120_pilon 24384..25844 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8853.t1 ID=Gchil8853.t1|Name=Gchil8853.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=240bp
MPPKQSEEKNSLGKRKVLMFQIMSATSAFGTGIDSSFVRSVVHVGFSRSV
MEYIQESGRAGRDGEPGRCVLLFNETFLKRYEQVIKYEPPESTNVGNSWD
GKENDSRGISMNISQSIKPHFIRGNLENANESWKMQDAPCCYGCGLPLKF
ESSETHPSRDQIGSRCLVKACLKVCIAVWCNEDGRTWIIDEFKLSRDMDD
NTLRSMYAFVTWLQEKNSERVGFNVMDMFPKLWVRMKGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase