Gchil885.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil885.t1
Unique NameGchil885.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length89
Homology
BLAST of Gchil885.t1 vs. uniprot
Match: A0A2V3ILP5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILP5_9FLOR)

HSP 1 Score: 135 bits (339), Expect = 1.180e-39
Identity = 65/87 (74.71%), Postives = 74/87 (85.06%), Query Frame = 0
Query:    1 MTIVDRSNTNWTPWPRLAGIPQRFQVFGGVAAIMGAAALLFQFRASRANVPSTLTKEWKDATKKSFEAKEREAADPVVMNPITASRK 87
            MT+VDRSNTNWTPWPRLA IPQRFQ+ GGVAAIMGAAALL + R SRA VPST+ KEW+DAT  +  AKEREAADP+V+NPI+ S K
Sbjct:    1 MTVVDRSNTNWTPWPRLAAIPQRFQLIGGVAAIMGAAALLLKARTSRAPVPSTINKEWQDATDAASHAKEREAADPIVLNPISKSMK 87          
BLAST of Gchil885.t1 vs. uniprot
Match: R7QA36_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA36_CHOCR)

HSP 1 Score: 108 bits (269), Expect = 6.030e-29
Identity = 54/87 (62.07%), Postives = 68/87 (78.16%), Query Frame = 0
Query:    1 MTIVDRSNTNWTPWPRLAGIPQRFQVFGGVAAIMGAAALLFQFRASRAN-VPSTLTKEWKDATKKSFEAKEREA-ADPVVMNPITAS 85
            MT+VDRS T+WTPWPRLAG+P+R Q+ GGVAAIMGAA + F++R      +PST+TKEW++AT K  EA   E+ ADPVV+NPIT S
Sbjct:    1 MTVVDRSGTDWTPWPRLAGVPKRLQIVGGVAAIMGAAGVFFEWRRRVGGPLPSTVTKEWQEATAKRSEAMPMESNADPVVLNPITKS 87          
BLAST of Gchil885.t1 vs. uniprot
Match: A0A1X6PEC9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEC9_PORUM)

HSP 1 Score: 86.7 bits (213), Expect = 1.910e-20
Identity = 46/79 (58.23%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    4 VDRSNTNWTPWPRLAGIPQRFQVFGGVAAIMGAAALLFQFRASRANVPSTLTKEWKDATKKSFEAKEREAADPVVMNPI 82
            VDRS TN  PWP LA +    QV GGVAAIMGAAA+L+Q+R     VPST T EW+ A  K   AKER A +PV +NPI
Sbjct:    3 VDRSGTNRLPWPSLARVSPNVQVAGGVAAIMGAAAILWQYRRQVGTVPSTRTDEWRAARAKMDMAKERVAGEPVEVNPI 81          
BLAST of Gchil885.t1 vs. uniprot
Match: A0A7V5I8Y2_9BACT (DUF1138 domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I8Y2_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 3.960e-12
Identity = 31/84 (36.90%), Postives = 50/84 (59.52%), Query Frame = 0
Query:    4 VDRSNTNWTPWPRLAGIPQRFQVFGGVAAIMGAAALLFQFRASRANVPSTLTKEWKDATKKSFEAKEREAADPVVMNPITASRK 87
            ++R+ T+W PWP +A  P+  Q+ GGV   +  A  + +F     + P T+ ++W+  T+K    KEREA +P V+NPI+ S K
Sbjct:    3 MNRTGTDWHPWPAVARFPKSVQLLGGVGLSLVFAYTMVEFSRRIGSRPRTVVEDWQAETEKRALQKEREAGEPTVLNPISRSFK 86          
BLAST of Gchil885.t1 vs. uniprot
Match: A0A5J4YZV8_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZV8_PORPP)

HSP 1 Score: 63.9 bits (154), Expect = 2.100e-11
Identity = 37/87 (42.53%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    1 MTIVDRSNTNWTPWP-RLAGIPQRFQVFGGVAAIMGAAALLFQFRASRANVPSTLTKEWKDATKKSFEAKEREAADPVVMNPITASR 86
            M  VD S T++  +P R+  +PQR QV+GG A ++G    ++ ++ +   V  T TKEW DAT     A  REAA PV MNPI   R
Sbjct:    1 MVGVDNSCTDYQVFPDRIHKLPQRVQVWGGTAILVGLGTAIYLYKRANRKVGRTGTKEWHDATLAMMPAWPREAAGPVEMNPIRRRR 87          
The following BLAST results are available for this feature:
BLAST of Gchil885.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3ILP5_9FLOR1.180e-3974.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QA36_CHOCR6.030e-2962.07Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PEC9_PORUM1.910e-2058.23Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7V5I8Y2_9BACT3.960e-1236.90DUF1138 domain-containing protein n=1 Tax=bacteriu... [more]
A0A5J4YZV8_PORPP2.100e-1142.53Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009515Protein of unknown function DUF1138PFAMPF06592DUF1138coord: 50..83
e-value: 7.3E-9
score: 35.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availableTMHMMTMhelixcoord: 24..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:854583..855015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil885.t1Gchil885.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 854583..855015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil885.t1 ID=Gchil885.t1|Name=Gchil885.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=89bp
MTIVDRSNTNWTPWPRLAGIPQRFQVFGGVAAIMGAAALLFQFRASRANV
PSTLTKEWKDATKKSFEAKEREAADPVVMNPITASRKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009515DUF1138