Gchil884.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil884.t1
Unique NameGchil884.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length471
Homology
BLAST of Gchil884.t1 vs. uniprot
Match: A0A2V3ICW7_9FLOR (Uma2 domain-containing protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICW7_9FLOR)

HSP 1 Score: 412 bits (1060), Expect = 8.620e-138
Identity = 220/316 (69.62%), Postives = 254/316 (80.38%), Query Frame = 0
Query:    1 MSSSEQSSMPAVTQQPASPAPSPLPAVNENSSLPSTPQSLFEEQFHVSALDRRQLGALHLLPATAEELFDIDRFKYGEYDLVDGLLNWRGMWESDRNKEQAKNLLYRFQLVELNNPISNRIATLKATIAIPTQRHLRSHQPSSSNASPQSGASEETATPARGHPRYSVIRADLAIGERLSDEARERLSPTSQMITFPVGHKP-QVVVENTSSDERRDMEEIRELYEQKEIDKYIVIRNRDRAKNPQPAVHEGNLRNGKYRGMEKPLRGDDEVDLGPIGVLQAKDCINPGKPDQWMHREWRKLRMGVEEAEKKEQEE 315
            M  SE+ SMPA  QQPAS A S LP V ENSSL ST QSLF+E+   +ALDRR+LGALHL PAT EELFDIDRFKYGEYDLV+GLL WRGM ES+RNKEQAK+LLYRFQ  E + P + R+ATL+ATIAIPT+R+L SHQPSSSNA PQS  SE++ TP RGHP YSV+RAD A+GER+S+E R  LSP S  ITFP+   P +VVVENTS++ RRDM E +ELY Q++I KYI I N  RAKNPQPAV+EGNLRNGKY GMEKPLRG+DEV+LGPIGVL+AKDCI+PG PD  +HRE R+ RM  EEAEKK  EE
Sbjct:    1 MQFSEEDSMPAPIQQPASLALSSLPEVGENSSLESTSQSLFQEELPAAALDRRKLGALHLQPATVEELFDIDRFKYGEYDLVEGLLIWRGMSESNRNKEQAKHLLYRFQRAEQDKPTTRRVATLEATIAIPTKRYLMSHQPSSSNAPPQSEDSEKSPTPRRGHPDYSVVRADFAVGERISNEDRALLSPGSSKITFPLKRTPPEVVVENTSTNGRRDMVEKQELYAQRKIPKYITIHNDARAKNPQPAVYEGNLRNGKYEGMEKPLRGEDEVNLGPIGVLKAKDCIHPGSPDARVHREGREQRMKREEAEKKRVEE 316          
BLAST of Gchil884.t1 vs. uniprot
Match: A0A2V3IBX3_9FLOR (Uma2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBX3_9FLOR)

HSP 1 Score: 293 bits (750), Expect = 1.910e-92
Identity = 154/226 (68.14%), Postives = 182/226 (80.53%), Query Frame = 0
Query:   91 MWESDRNKEQAKNLLYRFQLVELNNPISNRIATLKATIAIPTQRHLRSHQPSSSNASPQSGASEETATPARGHPRYSVIRADLAIGERLSDEARERLSPTSQMITFPVGHKP-QVVVENTSSDERRDMEEIRELYEQKEIDKYIVIRNRDRAKNPQPAVHEGNLRNGKYRGMEKPLRGDDEVDLGPIGVLQAKDCINPGKPDQWMHREWRKLRMGVEEAEKKEQEE 315
            M ES+RNKEQAK+LLYRFQ  E + P + R+ATL+ATIAIPT+R+L SHQPSSSNA PQS  SE++ TP RGHP YSV+RAD A+GER+S+E R  LSP S  ITFP+   P +VVVENTS++ RRDM E +ELY Q++I KYI I N  RAKNPQPAV+EGNLRNGKY GMEKPLRG+DEV+LGPIGVL+AKDCI+PG PD  +HRE R+ RM  EEAEKK  EE
Sbjct:    1 MSESNRNKEQAKHLLYRFQRAEQDKPTTRRVATLEATIAIPTKRYLMSHQPSSSNAPPQSEDSEKSPTPRRGHPDYSVVRADFAVGERISNEDRALLSPGSSKITFPLKRTPPEVVVENTSTNGRRDMVEKQELYAQRKIPKYITIHNDARAKNPQPAVYEGNLRNGKYEGMEKPLRGEDEVNLGPIGVLKAKDCIHPGSPDARVHREGREQRMKREEAEKKRVEE 226          
BLAST of Gchil884.t1 vs. uniprot
Match: A0A2V3IF83_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF83_9FLOR)

HSP 1 Score: 87.8 bits (216), Expect = 2.050e-17
Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0
Query:  124 LKATIAIPTQRHLRSHQPSSSNASPQSGASEETATPARGHPRYSVIRADLAIGERLSDEARERLSPTSQMITFPVGHKPQVVVENTSSD 212
            + A +AIP +R+ R  QPSSSN +P S  S +++TP RG+P+YSV+  DLAI  +LSDE R R+SP SQ I F + H PQ V+E++S++
Sbjct:    1 MDAAVAIPIKRYPR-FQPSSSNDAPLSDDSNDSSTPRRGNPKYSVVSPDLAIANKLSDEPRSRISPASQNIRFRLNHPPQFVLESSSTN 88          
The following BLAST results are available for this feature:
BLAST of Gchil884.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ICW7_9FLOR8.620e-13869.62Uma2 domain-containing protein n=3 Tax=Gracilariop... [more]
A0A2V3IBX3_9FLOR1.910e-9268.14Uma2 domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IF83_9FLOR2.050e-1750.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 305..423
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..461
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:792111..793523 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil884.t1Gchil884.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 792111..793523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil884.t1 ID=Gchil884.t1|Name=Gchil884.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=471bp
MSSSEQSSMPAVTQQPASPAPSPLPAVNENSSLPSTPQSLFEEQFHVSAL
DRRQLGALHLLPATAEELFDIDRFKYGEYDLVDGLLNWRGMWESDRNKEQ
AKNLLYRFQLVELNNPISNRIATLKATIAIPTQRHLRSHQPSSSNASPQS
GASEETATPARGHPRYSVIRADLAIGERLSDEARERLSPTSQMITFPVGH
KPQVVVENTSSDERRDMEEIRELYEQKEIDKYIVIRNRDRAKNPQPAVHE
GNLRNGKYRGMEKPLRGDDEVDLGPIGVLQAKDCINPGKPDQWMHREWRK
LRMGVEEAEKKEQEEEERRQAAEKEEREEEERRQAAEKEEREEEERRQAA
EKEKREEKERRQAAEKEKREEKERRQAAEKEKREEKERRQAAEKREREEK
ERRQKEKERRQKAEARIREQRRQMREAGLPVGESSSSSRSSPSSNNSRFS
SSPGSRSSLSPKSPARKKRK*
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