Gchil873.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil873.t1
Unique NameGchil873.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length314
Homology
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BLAST of Gchil873.t1 vs. uniprot
Match: A0A2V3IEU7_9FLOR (5'-AMP-activated protein kinase subunit gamma-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEU7_9FLOR)

HSP 1 Score: 166 bits (420), Expect = 8.860e-46
Identity = 118/281 (41.99%), Postives = 159/281 (56.58%), Query Frame = 0 
Query:   32 VRAAAVLLDGALRGVLTLDGALVAAAQPSLLQAPLRELLRAAPQLLQPLVRVSADASQLSAARLLARCAAPPLAVMHRAEPLHCLFAERLLAELQPRFRAAPFLQSSLRALRLGRFGAVVSAHVRMPLADAAALMLTHRLDSLPVVDERAALCGVLDAELVGAAIVRAAVDAAPHASPPTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVAALMREVRVCSRDDPLQHVVAQLRTGCRRVFVVNQRRVE-GVVGLRHLLRFFLA 311
            VRAAAVL +G+L G+LTL  AL  A    LL  PL   ++ +   +QP + VSADA+QL AARLL++  +PPLAVMH +E LH LFAERLLA L+PRFR APFL+ S+ +L+LGR+  +V+A +RM + DAA +M++  LDSLPV      + GVLD E+VGAA     +                                                        V A M++  VC+R++ L  V+ +LR G RRVFV +++RV  GV+GL HLLRFFL+
Sbjct:   77 VRAAAVLHNGSLCGMLTLTSALHVACDSQLLSRPLYTFVQQSA--VQPFISVSADAAQLHAARLLSQTGSPPLAVMHGSEALHWLFAERLLALLEPRFRDAPFLRYSIGSLQLGRYTDLVTADMRMRVEDAARVMISRGLDSLPVT-AGGRVVGVLDGEVVGAAAAAGGIGG-----------------------------------------------------EVCAFMQQGAVCAREEALGSVIGKLRDGWRRVFVADEQRVVIGVIGLGHLLRFFLS 301
The following BLAST results are available for this feature:
BLAST of Gchil873.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEU7_9FLOR8.860e-4641.995'-AMP-activated protein kinase subunit gamma-2 n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000644CBS domainSMARTSM00116cbs_1coord: 264..310
e-value: 0.0056
score: 25.9
coord: 149..197
e-value: 0.2
score: 20.7
IPR000644CBS domainPFAMPF00571CBScoord: 150..187
e-value: 4.7E-4
score: 20.5
coord: 260..309
e-value: 4.2E-7
score: 30.3
IPR000644CBS domainPROSITEPS51371CBScoord: 261..313
score: 8.698306
IPR000644CBS domainPROSITEPS51371CBScoord: 144..203
score: 8.64687
NoneNo IPR availableGENE3D3.10.580.10coord: 128..199
e-value: 2.5E-7
score: 32.5
NoneNo IPR availableGENE3D3.10.580.10coord: 234..313
e-value: 1.6E-7
score: 33.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..256
NoneNo IPR availablePANTHERPTHR13780AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNITcoord: 66..309
NoneNo IPR availablePANTHERPTHR13780:SF35LD22662Pcoord: 66..309
NoneNo IPR availableSUPERFAMILY54631CBS-domain paircoord: 150..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:733784..735477 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil873.t1Gchil873.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 733784..735477 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil873.t1 ID=Gchil873.t1|Name=Gchil873.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=314bp
MRGERNAAQRRRTDVETFGDAAVASARRGAHVRAAAVLLDGALRGVLTLD
GALVAAAQPSLLQAPLRELLRAAPQLLQPLVRVSADASQLSAARLLARCA
APPLAVMHRAEPLHCLFAERLLAELQPRFRAAPFLQSSLRALRLGRFGAV
VSAHVRMPLADAAALMLTHRLDSLPVVDERAALCGVLDAELVGAAIVRAA
VDAAPHASPPTQSSSPSPPSQQHQHQQQQHPPQQPQQQPQQQQQQQQQQQ
QQQQQPSVAALMREVRVCSRDDPLQHVVAQLRTGCRRVFVVNQRRVEGVV
GLRHLLRFFLAHY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000644CBS_dom