Gchil8618.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8618.t1
Unique NameGchil8618.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length419
Homology
BLAST of Gchil8618.t1 vs. uniprot
Match: A0A2V3J4K6_9FLOR (FHA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4K6_9FLOR)

HSP 1 Score: 237 bits (605), Expect = 2.410e-70
Identity = 134/257 (52.14%), Postives = 171/257 (66.54%), Query Frame = 0
Query:    2 SVLPTQMGLPVCLVPSKLKYKPNAESLAEPSRIHGFQEVRARSQETVGWIKFMDPIPFLLFGRDLGASHVFVGHPSVSNQHAVSFWDRRTGYCMIQDLESESGTHVNGQVVSHLEPTILNIDDTIRFGTSAHVYVFGYLPMEYRDEEPANARPSST----DARTEASG--LPPPPRRLSGGSPSRGPTPPS-----RSTPGSEVIGRQSLYPSRMAPP-PQGTPSVGPRMSPSRDHEFSRPDDRDRGMDSRWRDRPM 246
            + +P QMGLP CLVPS  K K N ES  +PS+IHGF E+R +S+ET+GWIKF+D +PFL+FGRDLGA HVFVGHPSV+ QHA ++WD  +G+CMIQD+ESE GT +NG+ +SH++PT+L + D+IRFG SAHVY+F YLP EYRD   + + P       DARTEASG  +PP  RR+S  SP RG  PP      R +PG +    +  +P RM  P  +  P  G R SP RD      D R R MD  +  RP+
Sbjct:    3 AYVPAQMGLPNCLVPSVPKIKVNPESCGKPSQIHGFLEMRIKSKETIGWIKFIDKVPFLVFGRDLGACHVFVGHPSVATQHAFAYWDLSSGFCMIQDMESEHGTSINGRTISHMQPTLLQLKDSIRFGNSAHVYIFDYLPPEYRDATGSASPPRPPMPPPDARTEASGPLIPPRSRRMSD-SPRRGSDPPPGLDGFRRSPGRDPSSGE--FPPRMHEPLHRPGPPGGGRWSPGRDGGEPWRDGRGRPMDDGYDRRPL 256          
BLAST of Gchil8618.t1 vs. uniprot
Match: A0A7S2ZH88_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZH88_9RHOD)

HSP 1 Score: 80.1 bits (196), Expect = 5.260e-14
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   59 FLLFGRDLGASHVFVGHPSVSNQHAVSFWDRRTGYCMIQDLESESGTHVNGQVVSHLEPTILNIDDTIRFGTSAHVYVF 137
            FL+FGRD+G   +FVGH SVS QHA   W  +  YC + DLESESGT +NG+V+    P ++  +D I FG S+ +  F
Sbjct:   17 FLVFGRDVGCCDIFVGHASVSRQHAAVVW-HKNNYCYLLDLESESGTKINGRVLEPKVPMMIYPEDKITFGKSSRLLKF 94          
BLAST of Gchil8618.t1 vs. uniprot
Match: A0A6T6BYZ8_9RHOD (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BYZ8_9RHOD)

HSP 1 Score: 67.0 bits (162), Expect = 7.940e-9
Identity = 46/126 (36.51%), Postives = 62/126 (49.21%), Query Frame = 0
Query:   15 VPSKLKYKPNAES---LAEPSRIHGFQEVRARSQETVGWIKFMDPIPFLLFGRDLGASHVFVGHPSVSNQHAVSFWDRRTGYCMIQDLESESGTHVNGQVVSHLEPTILNIDDTIRFGTSAHVYVF 137
            +P KL+ K   E    + EP R  G   V   + E V  + F     +++FGRD   S+ FVGHPSVS QHA   W R      + DLESE+GT+++   +   EP  L     I F +    YVF
Sbjct:   26 LPEKLRPKNIFEIPVWMGEPDRFCGL--VVEWNNEPVHVLPFQKG--YMIFGRDPAVSNTFVGHPSVSRQHAAIVWSREDRLAYLIDLESENGTYIDDIQIPLNEPVKLLPGHRISFASCFRRYVF 147          
BLAST of Gchil8618.t1 vs. uniprot
Match: A0A1X6NIV6_PORUM (FHA domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIV6_PORUM)

HSP 1 Score: 64.3 bits (155), Expect = 4.070e-8
Identity = 51/155 (32.90%), Postives = 67/155 (43.23%), Query Frame = 0
Query:    8 MGLPVCLVPSKLKYKPNAESLAEPSRIHGFQEVRARSQETVGWIKF--MDPIPFLLFGRDLGASHVFVGHPSVSNQHAVSFWDRRTGYCMIQDLESESGTHVNGQVVSHLEPTILNIDDTIRFGTSAHVYVFGYLPMEYRDEEPANARPSSTDAR 160
            + LP    PS+    P  E     + +H    +    ++ VG   F   D     +FGRD     +FVGH SVS QHA   W  + G C     E+ +GT VNG+ + +  PT L   DT+  G SA  YVF   P        A ARP     R
Sbjct:   44 LSLPRPQPPSQAALMPWMERANPTAILH----ILRSDEKEVGVFVFPNSDAPCLTVFGRDPAVCDIFVGHASVSRQHAWLSW--QDGICYACPYETPTGTTVNGKALPYAYPTALQPGDTLVCGKSARRYVFLLDPGGRIAAAAAAARPGGPGGR 192          
The following BLAST results are available for this feature:
BLAST of Gchil8618.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J4K6_9FLOR2.410e-7052.14FHA domain-containing protein n=1 Tax=Gracilariops... [more]
A0A7S2ZH88_9RHOD5.260e-1448.10Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A6T6BYZ8_9RHOD7.940e-936.51Peptidyl-prolyl cis-trans isomerase n=1 Tax=Compso... [more]
A0A1X6NIV6_PORUM4.070e-832.90FHA domain-containing protein (Fragment) n=1 Tax=P... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000253Forkhead-associated (FHA) domainSMARTSM00240FHA_2coord: 59..112
e-value: 1.1E-5
score: 34.9
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 62..129
e-value: 4.4E-13
score: 49.4
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 60..112
score: 10.3469
IPR000253Forkhead-associated (FHA) domainCDDcd00060FHAcoord: 53..138
e-value: 2.21468E-16
score: 72.419
NoneNo IPR availableGENE3D2.60.200.20coord: 16..139
e-value: 7.7E-19
score: 69.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..196
NoneNo IPR availablePANTHERPTHR23308NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1coord: 59..172
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 47..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:625327..626583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8618.t1Gchil8618.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 625327..626583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8618.t1 ID=Gchil8618.t1|Name=Gchil8618.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=419bp
MSVLPTQMGLPVCLVPSKLKYKPNAESLAEPSRIHGFQEVRARSQETVGW
IKFMDPIPFLLFGRDLGASHVFVGHPSVSNQHAVSFWDRRTGYCMIQDLE
SESGTHVNGQVVSHLEPTILNIDDTIRFGTSAHVYVFGYLPMEYRDEEPA
NARPSSTDARTEASGLPPPPRRLSGGSPSRGPTPPSRSTPGSEVIGRQSL
YPSRMAPPPQGTPSVGPRMSPSRDHEFSRPDDRDRGMDSRWRDRPMGRGE
PMGGRRSYSPPPPPPPLPPPPNSGRYTPERGPNEPLARRDRRDDRYDDPP
GMPPPPHDHRSFDRRPLPPGDYLDRPVPPPLPYPPRRPGPPDAHPDDYRD
YDPQRPPMRDFDGRGGHPPPANYRGRGGQAYDYDRAQDDYNRRGGGRGGY
DGDRGRQRGPRSRRSDGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000253FHA_dom
IPR008984SMAD_FHA_dom_sf