Gchil8614.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8614.t1
Unique NameGchil8614.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length503
Homology
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BLAST of Gchil8614.t1 vs. uniprot
Match: A0A2V3J3P4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3P4_9FLOR)

HSP 1 Score: 202 bits (515), Expect = 1.260e-57
Identity = 137/322 (42.55%), Postives = 173/322 (53.73%), Query Frame = 0 
Query:    1 MSKKHSTEDPLLAGLSRLSTSH-----------ASQTRASRPPRTD--------PSRPASAPHSANLPPTTEKTSISERQNQSSHPPAPAHSRRRSQSALPTTSSNYPPLKPRTDRHSYPTPH---QSQQLPQKQFGNDSSSRQGTISIPHRLSGPEPWGADQPIVPTVMPLNPLHHSEISELIEQATGLGRPIDGDPAAAGRLLQLIKSGSLPPRTICEHVVAGSGPNEVKVNARALWLLHYLMVEGGPLVLPQVVQSSDGRNPPAVKLVLKVLRSYGYETDADGLDVLHDDEKVRNLSFPTDKQ-VPEDALQKSRGERTY 299
            MS  +  +DPLLAGLSRLSTS             +QT +S+ P           P+  A  P    + P    T+                        L   SSN          HS  +P    +S      Q  +DS S+ G+                Q + PTV PL PLH S+  ELIE+ TGLGRP DGDP+ A RLLQLI++GSLPP T+ E++VAGSGPNEVKVNAR LWL+HYLMV GGP ++P+ VQ    RN PA+ LVL VLRS+GY  + D LDVL DDEKVR ++  TD+  VP D+LQ+S G+R +
Sbjct:    1 MSTNNVIDDPLLAGLSRLSTSRNRPQVNIQIDRKTQTVSSQQPXXXXXXXXXXXPAASAEHPQREQVDPARRATNAG---------------------GLSAFSSNA--------EHSSSSPRHFRRSTSDASSQQASDSFSKHGSTQFEQ---------PSQHLRPTVKPLIPLHRSDTCELIERTTGLGRPSDGDPSGAERLLQLIRNGSLPPHTVLEYIVAGSGPNEVKVNARVLWLMHYLMVHGGPDMVPEAVQPFRKRNAPALHLVLAVLRSFGYIEETDALDVLQDDEKVRAMTLSTDRNNVPTDSLQRSWGKRLW 284
[Close]
BLAST of Gchil8614.t1 vs. uniprot
Match: A0A2V3J478_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J478_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 1.290e-38
Identity = 74/128 (57.81%), Postives = 96/128 (75.00%), Query Frame = 0 
Query:  374 MTAAAQRLQRGKLAFSLCLHALTDACNAYSYALYLRRKVDNRDGQDFDLEPQREVLASMLRRWEQRGGKHLENVLHYVEERVYDLVVGRSSVAVRPESRHRREIEIEVTSFDALHRAFQYLRQRSKCA 501
            MTAAA RLQRG++ + + L AL DACNAYSYALYLR+KV+  + + F LE QR  LA +LR+WEQR G  LE +  ++++RVY++++  ++  VRPESRHRREIEIEVTSF+ALH  F YLR R   A
Sbjct:    1 MTAAAWRLQRGRVPYDISLLALADACNAYSYALYLRKKVEPGEDEHFTLELQRGKLAVLLRKWEQREGMGLELLRSHLDQRVYNMILNANAAIVRPESRHRREIEIEVTSFEALHETFAYLRHRGTSA 128
The following BLAST results are available for this feature:
BLAST of Gchil8614.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3P4_9FLOR1.260e-5742.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J478_9FLOR1.290e-3857.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..127
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..502
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:617999..619507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8614.t1Gchil8614.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 617999..619507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8614.t1 ID=Gchil8614.t1|Name=Gchil8614.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=503bp
MSKKHSTEDPLLAGLSRLSTSHASQTRASRPPRTDPSRPASAPHSANLPP
TTEKTSISERQNQSSHPPAPAHSRRRSQSALPTTSSNYPPLKPRTDRHSY
PTPHQSQQLPQKQFGNDSSSRQGTISIPHRLSGPEPWGADQPIVPTVMPL
NPLHHSEISELIEQATGLGRPIDGDPAAAGRLLQLIKSGSLPPRTICEHV
VAGSGPNEVKVNARALWLLHYLMVEGGPLVLPQVVQSSDGRNPPAVKLVL
KVLRSYGYETDADGLDVLHDDEKVRNLSFPTDKQVPEDALQKSRGERTYD
AAGVETYAIALGRKAWFHYRYSAVEVNYSLDRFYRAWHVENDCDPNRHES
NNEIFKLTLSKSALQDMYLLVCAMTAAAQRLQRGKLAFSLCLHALTDACN
AYSYALYLRRKVDNRDGQDFDLEPQREVLASMLRRWEQRGGKHLENVLHY
VEERVYDLVVGRSSVAVRPESRHRREIEIEVTSFDALHRAFQYLRQRSKC
AS*
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