Gchil8608.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8608.t1
Unique NameGchil8608.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length242
Homology
BLAST of Gchil8608.t1 vs. uniprot
Match: A0A2V3J392_9FLOR (50S ribosomal protein L22 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J392_9FLOR)

HSP 1 Score: 355 bits (910), Expect = 1.210e-121
Identity = 173/236 (73.31%), Postives = 201/236 (85.17%), Query Frame = 0
Query:    1 MLSFRSGFRMCASLRRLWHSSTPKQCAPEFLEIADERQDWTSSTTPKRVWPQDLRGMEIKTAKARRLGINTSPHKLNLVAKLVRNLRIEEARRQLTGCKKKTAPYVAATIQAAVKNATTFGMREDRLVVDEAFVGKGRYLRRIRPWHGKGRWGLEHKKYAHLTVKVRELDEELWEARVMSKYFHIKRGNGRPDDENHPIHSSSKVSWVSDLDDSFRKTKERITGLKALISSNEENS 236
            ML  R+   + +S+ R  HSS PK+C+PEFL+IA+E+ +      P+  WP D RG EI+TAKARRLGINTSPHKLNLVAKLVRNLRIEEARRQL GCKKKTAPYV ATI+AAVKNA  F +REDRLVVDEAFVGKGRYL RIRPWHGKGR+G+EHKKYAHLTVK+RELDEELWEARVM+KYFH++RG G  DDENHPIHSS  VSWVSDLDDS++KT+ERITGLKAL++S++  +
Sbjct:    1 MLFTRTVNHLRSSIHRSLHSSAPKRCSPEFLDIAEEQSNPPPMRVPQPKWPLDPRGEEIRTAKARRLGINTSPHKLNLVAKLVRNLRIEEARRQLAGCKKKTAPYVMATIEAAVKNARAFNLREDRLVVDEAFVGKGRYLPRIRPWHGKGRYGVEHKKYAHLTVKLRELDEELWEARVMTKYFHMRRGKGLRDDENHPIHSSKLVSWVSDLDDSYKKTRERITGLKALLNSDDHGA 236          
BLAST of Gchil8608.t1 vs. uniprot
Match: R7QPD5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPD5_CHOCR)

HSP 1 Score: 251 bits (640), Expect = 8.540e-81
Identity = 136/229 (59.39%), Postives = 160/229 (69.87%), Query Frame = 0
Query:    5 RSGFR-MCASLRRLWHSSTPKQCAPEFLEIADERQDWTSSTTPKRVWPQDLRGMEIKTAKARRLGINTSPHKLNLVAKLVRNLRIEEARRQLTGCKKKTAPYVAATIQAAVKNATTFGMREDRLVVDEAFVGKGRYLRRIRPWHGKGRWGLEHKKYAHLTVKVRELDEELWEARVMSKYFHI--KRGNGRPD-DENHPIHSSSKVSWVSDLDDSFRKTKERITGLKALI 229
            RS FR +C+SL R        + A E  E    R+         R WP D RG EI+TAKARRLGI+TSPHKLN+VAKLVR + I EA RQ+ GC+KK + +V  TI AAV NA   G+REDRLVV  AFVGKG+YLR+IRPWHGKGR+G+EHKKYAHLTV VRELDEELWEA VM KY H+  + G   PD D NHPIH S +VSW S LD S R T++ I GL+AL+
Sbjct:    4 RSAFRSLCSSLSR----GLQTEAALELNEAGIARKP--------RPWPLDNRGEEIRTAKARRLGISTSPHKLNIVAKLVRGMTINEAERQMVGCRKKHSEHVWKTIAAAVTNARHAGLREDRLVVSHAFVGKGKYLRKIRPWHGKGRYGIEHKKYAHLTVLVRELDEELWEAAVMPKYIHLGYRHGENDPDHDRNHPIHKSDRVSWHSQLDVSMRATRDNIQGLRALL 220          
BLAST of Gchil8608.t1 vs. uniprot
Match: D8T4I1_SELML (Uncharacterized protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T4I1_SELML)

HSP 1 Score: 91.3 bits (225), Expect = 6.770e-19
Identity = 55/133 (41.35%), Postives = 80/133 (60.15%), Query Frame = 0
Query:   60 KTAKARRLGINTSPHKLNLVAKLVRNLRIEEARRQLTGCKKKTAPYVAATIQAAVKNAT-TFGMREDRLVVDEAFVGKGRYLRRIRPWHGKGRWGLEHKKYAHLTVKVRELD-------EELWEARVMSKYFH 184
            KT +A    I  SP K+NLVAK+VR +R+ +A  Q++   K+ A  V   + +A  NA   +G   ++L+VDEAFVGKG+YL+RI P H +GR+G+  KK   LTV +RE+        E+L E +   KY +
Sbjct:   46 KTVRAMLREIPQSPKKMNLVAKVVRGMRVNDALIQMSVLIKRAASTVYKVLHSARANAVHNYGFDAEKLIVDEAFVGKGKYLKRIWP-HARGRFGIREKKRCRLTVLLREMTPKEEILLEKLREKQKRGKYIY 177          
BLAST of Gchil8608.t1 vs. uniprot
Match: A0A0K9PHT5_ZOSMR (Uncharacterized protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PHT5_ZOSMR)

HSP 1 Score: 92.4 bits (228), Expect = 9.210e-19
Identity = 53/106 (50.00%), Postives = 70/106 (66.04%), Query Frame = 0
Query:   68 GINTSPHKLNLVAKLVRNLRIEEARRQLTGCKKKTAPYVAATIQAAVKNAT-TFGMREDRLVVDEAFVGKGRYLRRIRPWHGKGRWGLEHKKYAHLTVKVRELDEE 172
            GI  SP K+NLVAKLVR +R+E+A  QL    K+ A  V   I++A  NA+   G   DRL+V+EAFVGKG YL+RI  +H KGR G+  + +  LTV +RE+ EE
Sbjct:  119 GIRQSPKKVNLVAKLVRGMRVEDALLQLQVTVKRAAKTVFKVIKSARANASHNHGFDPDRLIVEEAFVGKGMYLKRI-SYHAKGRSGIMERPHCRLTVILREITEE 223          
BLAST of Gchil8608.t1 vs. uniprot
Match: A0A7I4EJQ3_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4EJQ3_PHYPA)

HSP 1 Score: 90.1 bits (222), Expect = 2.430e-18
Identity = 56/125 (44.80%), Postives = 78/125 (62.40%), Query Frame = 0
Query:   69 INTSPHKLNLVAKLVRNLRIEEARRQLTGCKKKTAPYVAATIQAAVKNAT-TFGMREDRLVVDEAFVGKGRYLRRIRPWHGKGRWGLEHKKYAHLTVKVREL--DEELWEARVMSKYFHIKRGNG 190
            I  SP K+NLVA+LVR +R+++A  Q+    K+ A  VA  + +A  NA   FGM +DRL+V EAFVGK +YL+R+R  HGKG+ G   +    LTV V+EL  ++E   ARV    +H K+  G
Sbjct:   67 IKQSPKKVNLVAELVRGMRVDDALMQMAVSTKRAAKVVAKVVTSARANAIHNFGMDKDRLIVAEAFVGKDKYLKRLRI-HGKGKAGQMVRPRCRLTVVVKELSAEKEAELARVRLHKYHSKKIRG 190          
BLAST of Gchil8608.t1 vs. uniprot
Match: A0A176WPM8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WPM8_MARPO)

HSP 1 Score: 91.3 bits (225), Expect = 2.470e-18
Identity = 56/117 (47.86%), Postives = 78/117 (66.67%), Query Frame = 0
Query:   58 EIKTAKARRLGINTSPHKLNLVAKLVRNLRIEEARRQLTGCKKKTAPYVAATIQAAVKNAT-TFGMREDRLVVDEAFVGKGRYLRRIRPWHGKGRWG-LEHKKYAHLTVKVRELDEE 172
            E KTA+A   GI  SP KLN++A++VR +R+E+A  QL    K+ A  VA    +A  NA   +G+ +DRLVV EAFVGK ++L+R  P HGKG+ G +EH + + LTV V+E+ EE
Sbjct:  108 EDKTAQAVLTGIRMSPQKLNMMAEMVRGMRLEDALNQLAVSLKRAAKTVAKVTLSAQANAVHNYGLNKDRLVVAEAFVGKDKFLKRHMP-HGKGKSGKMEHAR-SRLTVIVKEMSEE 222          
BLAST of Gchil8608.t1 vs. uniprot
Match: A0A834H5Y7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834H5Y7_RHOSS)

HSP 1 Score: 88.6 bits (218), Expect = 5.430e-18
Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 0
Query:   68 GINTSPHKLNLVAKLVRNLRIEEARRQLTGCKKKTAPYVAATIQAAVKNAT-TFGMREDRLVVDEAFVGKGRYLRRIRPWHGKGRWGLEHKKYAHLTVKVRELDEE 172
            GI  SP K+NLVA LVR +R+E+A  QL    K+ +  V   I +A  NAT  +G+  DRL+V EAFVGKG +L+R   +HG+GR G+ HK    LTV VRE+  E
Sbjct:   82 GIKQSPKKVNLVAALVRGMRVEDALLQLQVMVKRASKTVYQVIHSARANATHNYGLDPDRLLVAEAFVGKGLFLKR-ESFHGRGRSGVMHKPECRLTVVVREITPE 186          
BLAST of Gchil8608.t1 vs. uniprot
Match: A0A2K1K7H4_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7H4_PHYPA)

HSP 1 Score: 90.1 bits (222), Expect = 8.490e-18
Identity = 56/125 (44.80%), Postives = 78/125 (62.40%), Query Frame = 0
Query:   69 INTSPHKLNLVAKLVRNLRIEEARRQLTGCKKKTAPYVAATIQAAVKNAT-TFGMREDRLVVDEAFVGKGRYLRRIRPWHGKGRWGLEHKKYAHLTVKVREL--DEELWEARVMSKYFHIKRGNG 190
            I  SP K+NLVA+LVR +R+++A  Q+    K+ A  VA  + +A  NA   FGM +DRL+V EAFVGK +YL+R+R  HGKG+ G   +    LTV V+EL  ++E   ARV    +H K+  G
Sbjct:  138 IKQSPKKVNLVAELVRGMRVDDALMQMAVSTKRAAKVVAKVVTSARANAIHNFGMDKDRLIVAEAFVGKDKYLKRLRI-HGKGKAGQMVRPRCRLTVVVKELSAEKEAELARVRLHKYHSKKIRG 261          
BLAST of Gchil8608.t1 vs. uniprot
Match: UPI00125DE0C9 (uncharacterized protein LOC116028594 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125DE0C9)

HSP 1 Score: 88.2 bits (217), Expect = 3.310e-17
Identity = 54/113 (47.79%), Postives = 70/113 (61.95%), Query Frame = 0
Query:   61 TAKARRLGINTSPHKLNLVAKLVRNLRIEEARRQLTGCKKKTAPYVAATIQAAVKNAT-TFGMREDRLVVDEAFVGKGRYLRRIRPWHGKGRWGLEHKKYAHLTVKVRELDEE 172
            T +A   GI  SP K+NLVA LVR +R+E+A  QL    K+ A  V   I +A  NAT  +G+  DRL+V EAFVGKG YL+R+  +H KGR G+  +    LTV VRE+  E
Sbjct:  112 TVQAVLKGIKQSPKKVNLVAALVRGMRVEDALLQLQVTVKRAAKTVYQVIHSARANATHNYGLDPDRLLVAEAFVGKGLYLKRV-SYHAKGRSGVMERPRCRLTVVVREITPE 223          
BLAST of Gchil8608.t1 vs. uniprot
Match: A0A834L4W6_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834L4W6_RHOSS)

HSP 1 Score: 86.3 bits (212), Expect = 3.780e-17
Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 0
Query:   68 GINTSPHKLNLVAKLVRNLRIEEARRQLTGCKKKTAPYVAATIQAAVKNAT-TFGMREDRLVVDEAFVGKGRYLRRIRPWHGKGRWGLEHKKYAHLTVKVRELDEE 172
            GI  SP K NLVA LVR +R+E+A  QL    K+ +  V   I +A  NAT   G+  DRL+V EAFVGKG +L+R   +HG+GR G+ HK    LTV VRE+  E
Sbjct:   44 GIKQSPKKANLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDRLLVAEAFVGKGLFLKR-ESFHGRGRSGVMHKPECRLTVVVREITPE 148          
The following BLAST results are available for this feature:
BLAST of Gchil8608.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J392_9FLOR1.210e-12173.3150S ribosomal protein L22 n=1 Tax=Gracilariopsis c... [more]
R7QPD5_CHOCR8.540e-8159.39Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
D8T4I1_SELML6.770e-1941.35Uncharacterized protein (Fragment) n=4 Tax=Selagin... [more]
A0A0K9PHT5_ZOSMR9.210e-1950.00Uncharacterized protein n=1 Tax=Zostera marina Tax... [more]
A0A7I4EJQ3_PHYPA2.430e-1844.80Uncharacterized protein n=1 Tax=Physcomitrium pate... [more]
A0A176WPM8_MARPO2.470e-1847.86Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A834H5Y7_RHOSS5.430e-1849.06Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
A0A2K1K7H4_PHYPA8.490e-1844.80Uncharacterized protein n=1 Tax=Physcomitrium pate... [more]
UPI00125DE0C93.310e-1747.79uncharacterized protein LOC116028594 n=2 Tax=Ipomo... [more]
A0A834L4W6_RHOSS3.780e-1749.06Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036394Ribosomal protein L22/L17 superfamilyGENE3D3.90.470.10Ribosomal protein L22/L17coord: 39..187
e-value: 3.3E-30
score: 106.9
IPR036394Ribosomal protein L22/L17 superfamilySUPERFAMILY54843Ribosomal protein L22coord: 60..170
IPR001063Ribosomal protein L22/L17PFAMPF00237Ribosomal_L22coord: 69..166
e-value: 9.5E-21
score: 74.0
IPR001063Ribosomal protein L22/L17CDDcd00336Ribosomal_L22coord: 62..166
e-value: 4.68088E-25
score: 93.3242
NoneNo IPR availablePANTHERPTHR13501:SF839S RIBOSOMAL PROTEIN L22, MITOCHONDRIALcoord: 48..173
IPR005727Ribosomal protein L22, bacterial/chloroplast-typePANTHERPTHR13501CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATEDcoord: 48..173
IPR018260Ribosomal protein L22/L17, conserved sitePROSITEPS00464RIBOSOMAL_L22coord: 142..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:601914..602639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8608.t1Gchil8608.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 601914..602639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8608.t1 ID=Gchil8608.t1|Name=Gchil8608.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=242bp
MLSFRSGFRMCASLRRLWHSSTPKQCAPEFLEIADERQDWTSSTTPKRVW
PQDLRGMEIKTAKARRLGINTSPHKLNLVAKLVRNLRIEEARRQLTGCKK
KTAPYVAATIQAAVKNATTFGMREDRLVVDEAFVGKGRYLRRIRPWHGKG
RWGLEHKKYAHLTVKVRELDEELWEARVMSKYFHIKRGNGRPDDENHPIH
SSSKVSWVSDLDDSFRKTKERITGLKALISSNEENSRTIQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036394Ribosomal_L22/L17_sf
IPR001063Ribosomal_L22
IPR005727Ribosomal_L22_bac/chlpt-type
IPR018260Ribosomal_L22/L17_CS