Gchil8592.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8592.t1
Unique NameGchil8592.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length577
Homology
BLAST of Gchil8592.t1 vs. uniprot
Match: R7QG36_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG36_CHOCR)

HSP 1 Score: 701 bits (1809), Expect = 2.140e-243
Identity = 342/569 (60.11%), Postives = 429/569 (75.40%), Query Frame = 0
Query:   11 LKLKKCEFFTDSVKYLGHIIRHGQLSIDEVRVKSLKEVKHPKTQTELQSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVTSPPILALPNPGLPYEVDTDASAKQVGCALFQSSEDGERHPIGYWSRSLNVHERNYSVSEKECLAVVWALDTLRPYLMGTRFKVHTDHACLRWLLEISEPSGRLMRWRLRLSEFDFEILYKKGKLNTQADALSRLGTTAETEPYEDDDIPCFMVSDLEGGAQPLTD-DVCDDILVNESLDSPT--GSFIPISPEEMIREQQLDPFCTRIRARLNGGFQLPFEDDDQGYLIRTVGPRPRIVVPHTLQQRVLHLTHYLKVGAHPGGRKLYLTLTRDFYWPAMAFDCYAVKRACANFAKNDVKLRKHSKKLTLFPARAPLEFVAIDILGEFIRTPRGHRYLLVISDRFSKLTRTVPLKRITAATVAQAFLTHWVFVYGPPVQLLSDNGGQFASKFFQDVCRILDVRNLFVTTYHPQRNGQVERFNRTILNALRSYVADHPKNWDLYTDAITYAYNTQVHRVTSLSPFELVL 576
            LKL+KCEFF + +KYLGH++R G L +D  R  +L++V++P+TQT+L+SFLGLCNVYRRFVP++A I  PLN+LL KGQPV+LE F +    AF  L +A+ +P +LALP   LPY VDTDAS  Q+G ALFQ+  D +R PIG++SR+L   ERNYSVSEKE LAV+WA+ TLRPYL G  F VHTDHA LRWL+ +++PSGRL+RWRLRLSEFDFEI YKKGK N+QADALSRL T  ET    DD+IPCFM    EG  +     D  DDIL  E   +P     F  ++PEE+IREQ +DPFC RI+           E+ D G  ++       +V+P +L+ RVL L+HY K+  HPGGRKLY TL R FYW  MA DCYAV + CA  A+  VKLRK++K++ LF ++APLEF AIDILGE I T RG+RY+LVISDR+SKL RTVPLK+I+AA +AQAF+ HWVFVYGPPV+LLSDNG QF ++FFQ+VCRIL +RN+F TTYHPQ NGQVERF+RT+ +ALR YV +HPK+WDL++DA+T+AYNTQVHR T+++PFELVL
Sbjct:   30 LKLRKCEFFVEKIKYLGHVVRPGTLEVDAARTVALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIVHPLNQLLKKGQPVQLEGFDEPCKKAFHKLKDAILAPLVLALPKKDLPYPVDTDASDYQIGAALFQTHPDAQRKPIGFFSRTLAAAERNYSVSEKEFLAVIWAVQTLRPYLYGEHFIVHTDHASLRWLMNVTDPSGRLIRWRLRLSEFDFEIKYKKGKGNSQADALSRLRTAGETVDEIDDEIPCFMAEPAEGTVENEESFDAIDDILALEGGTAPDRLDQFQAVTPEELIREQAVDPFCNRIK-----------EEIDAGKFVQ-------LVIPQSLKDRVLGLSHYAKLAGHPGGRKLYKTLRRYFYWSTMALDCYAVAKNCAACARERVKLRKNTKEMKLFTSKAPLEFAAIDILGELITTKRGNRYILVISDRYSKLVRTVPLKKISAAHIAQAFVHHWVFVYGPPVKLLSDNGTQFTARFFQNVCRILGIRNVFTTTYHPQANGQVERFDRTLTSALRKYVGEHPKDWDLFSDAVTFAYNTQVHRTTNIAPFELVL 580          
BLAST of Gchil8592.t1 vs. uniprot
Match: R7Q4V7_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4V7_CHOCR)

HSP 1 Score: 641 bits (1653), Expect = 2.970e-223
Identity = 315/573 (54.97%), Postives = 402/573 (70.16%), Query Frame = 0
Query:    7 AGINLKLKKCEFFTDSVKYLGHIIRHGQLSIDEVRVKSLKEVKHPKTQTELQSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVTSPPILALPNPGLPYEVDTDASAKQVGCALFQSSEDGERHPIGYWSRSLNVHERNYSVSEKECLAVVWALDTLRPYLMGTRFKVHTDHACLRWLLEISEPSGRLMRWRLRLSEFDFEILYKKGKLNTQADALSRLGTTAETEPYEDDDIPCFMVSDLEGGAQPLTDDVCDDILVNESLDSPTGSFIPISPEEMIREQQLDPFCTRIRARLNGGFQLPFE---DDDQGYLIRTVGPRPRIVVPHTLQQRVLHLTHYLKVGAHPGGRKLYLTLTRDFYWPAMAFDCYAVKRACANFAKNDVKLRKHSKKLTLFPARAPLEFVAIDILGEFIRTPRGHRYLLVISDRFSKLTRTVPLKRITAATVAQAFLTHWVFVYGPPVQLLSDNGGQFASKFFQDVCRILDVRNLFVTTYHPQRNGQVERFNRTILNALRSYVADHPKNWDLYTDAITYAYNTQVHRVTSLSPFELVL 576
            AG+ LKL+KCEFF + +KYLGH++R G L +D  R+ +L++V++P+TQT+L+SFLGLCNVYR+FVP++A IA PLN+LL KGQPV +E F +    +F  L  A+ +PP+LALP   LPY                                      RNYSVSEKECLAV+WA+ TLRPYL G  F VHTDHA LRWL+ +++PSGRL+RWRLRLSEFDF+I YKKGK N+QADALSRL T  ET     D +   +   LEGG  P   D                 F  ++PEE+IREQ +DPFC  I+  ++ G    F    ++ +G L RT     ++V+P +++ RVL L+HY K+  HPGGRKLY TL R FYWP MA DCYAV + CA  A+  VKLR+++K++ LF  +APLEFVAIDILGE I T RG+RY+LVISDR+SKL RTVPLK+I+AA +AQ F+ HWVFVYGPPV+LLSDNG QF ++FFQ+VCRIL +RN+F TTYHPQ NGQVERFNRT+ +ALR YV +HPK+WDL++DA+T+AYNTQVHR T+++PFELVL
Sbjct:   31 AGVKLKLRKCEFFVEKIKYLGHVVRPGTLEVDAARIAALEQVRYPQTQTQLRSFLGLCNVYRQFVPHYAKIAHPLNQLLKKGQPVRMEGFDEPCEKSFHKLKGAILAPPVLALPKKDLPYS-------------------------------------RNYSVSEKECLAVIWAVQTLRPYLYGEHFIVHTDHASLRWLMNVTDPSGRLIRWRLRLSEFDFKIKYKKGKANSQADALSRLRTAGETNEDRFDALDDILA--LEGGTAPDRFD----------------QFQAVTPEELIREQAVDPFCNCIKEEMDAGKVRTFSMETEELEGTLCRTAAEFVQVVIPQSVRDRVLGLSHYAKLAGHPGGRKLYKTLRRYFYWPTMALDCYAVAKNCAACARERVKLRRNTKEMKLFTPKAPLEFVAIDILGELIITKRGNRYILVISDRYSKLVRTVPLKKISAAHIAQVFVHHWVFVYGPPVKLLSDNGTQFTARFFQNVCRILGIRNVFTTTYHPQANGQVERFNRTLTSALRKYVGEHPKDWDLFSDAVTFAYNTQVHRTTNIAPFELVL 548          
BLAST of Gchil8592.t1 vs. uniprot
Match: R7QFB9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFB9_CHOCR)

HSP 1 Score: 643 bits (1658), Expect = 4.010e-221
Identity = 318/576 (55.21%), Postives = 404/576 (70.14%), Query Frame = 0
Query:    4 LRDAGINLKLKKCEFFTDSVKYLGHIIRHGQLSIDEVRVKSLKEVKHPKTQTELQSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVTSPPILALPNPGLPYEVDTDASAKQVGCALFQSSEDGERHPIGYWSRSLNVHERNYSVSEKECLAVVWALDTLRPYLMGTRFKVHTDHACLRWLLEISEPSGRLMRWRLRLSEFDFEILYKKGKLNTQADALSRLGTTAETEPYEDDDIPCFMVSDLEGGAQPLTDDVCDDILVNESLDSPTGSFIPISPEEMIREQQLDPFCTRIRARLNGGFQLPFE---DDDQGYLIRTVGPRPRIVVPHTLQQRVLHLTHYLKVGAHPGGRKLYLTLTRDFYWPAMAFDCYAVKRACANFAKNDVKLRKHSKKLTLFPARAPLEFVAIDILGEFIRTPRGHRYLLVISDRFSKLTRTVPLKRITAATVAQAFLTHWVFVYGPPVQLLSDNGGQFASKFFQDVCRILDVRNLFVTTYHPQRNGQVERFNRTILNALRSYVADHPKNWDLYTDAITYAYNTQVHRVTSLSPFELVL 576
            L  A + LKL+KCEFF + +KYLG ++R G L +D  R  +L++V++P+TQT+L+SFLGLCNVYRRFVP++A I  PLN+LL KGQ ++LE   +     F  L +A+  PP+LALP   LPY VDTDAS  Q+G ALFQ+  D +R PI ++SR+L   ERNYSVSEKECLAV+WA+ TL PYL G  F VHTD+A LR L+ +++PSGRL+RWRLRLSEFDFEI YKKGK N+QADALSRL T  ET                                                   +IREQ +DPFC RI+  ++ G    F    ++ +G L RT     ++V+P +L+ RVL L+HY K+   PGGRKLY TL R FYWP MA DCYAV + CA  A+  VKLR+++K++ LF  +APLEFVAIDILGE I   RG+RY+LVISDR+SKL RTVPLK+I+AA +AQAF+ H VFVYGPPV+LLSDNG QF ++FFQ+VCRIL + N+F TTYHPQ NGQVERFNRT+ +ALR YV +HPK+WDL++DA+T+AYNTQVHR T+++PFELVL
Sbjct:   53 LEKACVKLKLRKCEFFVEKIKYLGRVVRPGTLEVDAARTAALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIEHPLNQLLKKGQLLQLEGLDEPCEKDFHKLKDAILEPPVLALPKKDLPYSVDTDASDYQIGAALFQTHPDAQRKPIRFFSRTLAAAERNYSVSEKECLAVIWAVQTLGPYLYGEHFVVHTDYASLRQLMNVTDPSGRLIRWRLRLSEFDFEIKYKKGKANSQADALSRLRTAEET---------------------------------------------------LIREQAVDPFCNRIKEEMDAGKVRTFSMETEEFEGTLCRTAAEFAQVVIPQSLRDRVLSLSHYAKLAGRPGGRKLYKTLRRYFYWPTMALDCYAVAKNCAACARERVKLRRNTKEMKLFTPKAPLEFVAIDILGEQITRKRGNRYILVISDRYSKLVRTVPLKKISAAYIAQAFVHHLVFVYGPPVKLLSDNGTQFTARFFQNVCRILGICNVFTTTYHPQSNGQVERFNRTLTSALRKYVGEHPKDWDLFSDAVTFAYNTQVHRTTNIAPFELVL 577          
BLAST of Gchil8592.t1 vs. uniprot
Match: R7Q5U0_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5U0_CHOCR)

HSP 1 Score: 595 bits (1534), Expect = 1.460e-206
Identity = 295/516 (57.17%), Postives = 360/516 (69.77%), Query Frame = 0
Query:   13 LKKCEFFTDSVKYLGHIIRHGQLSIDEVRVKSLKEVKHPKTQTELQSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVTSPPILALPNPGLPYEVDTDASAKQVGCALFQSSEDGERHPIGYWSRSLNVHERNYSVSEKECLAVVWALDTLRPYLMGTRFKVHTDHACLRWLLEISEPSGRLMRWRLRLSEFDFEILYKKGKLNTQADALSRLGTTAETEPYEDDDIPCFM--------VSDLEGGAQPLTDDVCDDILVNESLDSPTGSFIPISPEEMIREQQLDPFCTRIRARLNGGFQLPFEDDDQGYLIRTVGPRPRIVVPHTLQQRVLHLTHYLKVGAHPGGRKLYLTLTRDFYWPAMAFDCYAVKRACANFAKNDVKLRKHSKKLTLFPARAPLEFVAIDILGEFIRTPRGHRYLLVISDRFSKLTRTVPLKRITAATVAQAFLTHWVFVYGPPVQLLSDNGGQFASKFFQDVCRILDVRNLFVTTYHP 520
            L+KC FFT  V YLGH+IR G LSIDEV  ++L+E+  P TQTEL+SFLGLCNVYRRFVPN+A  A PLN+LL KGQP +LEPF + E  AF  L  AV SPPILALP  G PY +DTDAS  QVG ALFQS EDG+R  IG+WSR L+  ERNYS SEKECLAVVW + TLRPYL GTRF VHT+H+ LRWL+EI++PSGRLMRWRLRL EFDF++ YKKGKLNTQADALSRL T+ ET    D++IPCF+        V       + L     D IL  E   +      PI+ EEM+R                            G L+R V   P++V P   Q R+L++ H+  +  HP GRK++ TLTRD YWP++A DCY   R C + AK  VKLR+ +K+L LFPA APL+ ++ID+LGE IRTPRG R+LLVI+DRFS+L RTVPLKRITAA +A+AF+ HWVFVYGPPV +L+DNG QF S+ FQ++CRIL ++N+F TTYHP
Sbjct:   49 LEKCSFFTQEVHYLGHVIRPGTLSIDEVSTRALREIAIPTTQTELRSFLGLCNVYRRFVPNYAHKAAPLNQLLKKGQPAKLEPFDETEIKAFDTLREAVISPPILALPKAGFPYSMDTDASDYQVGTALFQSHEDGQRKHIGFWSRLLHAAERNYSTSEKECLAVVWGVVTLRPYLQGTRFTVHTEHSSLRWLMEITDPSGRLMRWRLRLGEFDFDVKYKKGKLNTQADALSRLFTSGETTVPVDEEIPCFLGRFSEMEPVDKFSDDFEDLESARFDAILTRERYSTDENLLDPITREEMLRG---------------------------GVLVRNVNATPQVVAPQDFQARILYMGHHALLAGHPRGRKMFYTLTRDCYWPSLAVDCYVTARNCIHCAKERVKLRRKTKRLKLFPATAPLKLLSIDLLGELIRTPRGIRWLLVITDRFSRLVRTVPLKRITAAEIAKAFVHHWVFVYGPPVTVLADNGKQFVSRLFQEICRILGIKNVFTTTYHP 537          
BLAST of Gchil8592.t1 vs. uniprot
Match: R7QL13_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QL13_CHOCR)

HSP 1 Score: 585 bits (1508), Expect = 5.480e-203
Identity = 289/506 (57.11%), Postives = 365/506 (72.13%), Query Frame = 0
Query:   16 CEFFTDSVKYLGHIIRHGQLSIDEVRVKSLKEVKHPKTQTELQSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVTSPPILALPNPGLPYEVDTDASAKQVGCALFQSSEDGERHPIGYWSRSLNVHERNYSVSEKECLAVVWALDTLRPYLMGTRFKVHTDHACLRWLLEISEPSGRLMRWRLRLSEFDFEILYKKGKLNTQADALSRLGTTAETEPYEDDDIPCFMVSDLEGGAQPLTD-DVCDDILVNESLDSPTGSFIPISPEEMIREQQLDPFCTRIRARLNGGFQLPFEDDDQGYLIRTVGPRPRIVVPHTLQQRVLHLTHYLKVGAHPGGRKLYLTLTRDFYWPAMAFDCYAVKRACANFAKNDVKLRKHSKKLTLFPARAPLEFVAIDILGEFIRTPRGHRYLLVISDRFSKLTRTVPLKRITAATVAQAFLTHWVFVYGPPVQLLSDNGGQFASKFFQDVCRILDVRNLFVTTYHP 520
            CEFF + +KYLGH++R G L +D  R  +L++V++P+TQT+L+SFLGLCNVYRRFVP++A IA PLN+LL KGQPV+LE F +    AF  L +A+ +PP+LALP   LPY VDTDAS  Q+G ALFQ+  D +R PIG++S++L   ERNYSVSEKECLAV+WA+ TLRPYL G  F VHTDHA LRWL+ +++PSGRL+RWRLRL EFDFEI YKKGK N+QADALSRL T  ET    D++IPCF     EG  +     D  DDIL  E      G+    +P+ + + Q +  F T               ++ +G L RT     ++V+P +L+ RVL L+HY K+  HPGGRKLY TL R FYWP MA DCYAV + CA  A+  VK RK++K++ LF  +APLEFVAIDILGE I T RG+RY+LVISDR+SKL RTVPLK+I+AA +AQAF+ HWVFVYGPP +LLSDNG QF ++FFQ+VCRIL +RN+F TTYHP
Sbjct:   30 CEFFVEKIKYLGHVVRPGTLEVDVARTAALEQVQYPRTQTQLRSFLGLCNVYRRFVPHYAKIARPLNQLLKKGQPVQLEGFDEPCKKAFHKLKDAILAPPVLALPKKDLPYSVDTDASDYQIGAALFQTHPDAQRKPIGFFSKTLAAAERNYSVSEKECLAVIWAVQTLRPYLYGEHFVVHTDHASLRWLMNVTDPSGRLIRWRLRLPEFDFEIKYKKGKANSQADALSRLRTAGETVDEIDNEIPCFTAEPAEGTVEDEESIDAADDILALEG-----GT----APDRLDQFQAVRTFSTET-------------EELEGTLCRTAVEFVQVVIPQSLRDRVLGLSHYAKLAGHPGGRKLYKTLRRYFYWPTMALDCYAVAKNCAACARERVKFRKNTKEMKLFTPKAPLEFVAIDILGELITTKRGNRYILVISDRYSKLVRTVPLKKISAAHIAQAFVHHWVFVYGPPFKLLSDNGTQFTARFFQNVCRILGIRNVFTTTYHP 513          
BLAST of Gchil8592.t1 vs. uniprot
Match: R7QJ39_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ39_CHOCR)

HSP 1 Score: 594 bits (1531), Expect = 4.860e-202
Identity = 298/552 (53.99%), Postives = 375/552 (67.93%), Query Frame = 0
Query:   25 YLGHIIRHGQLSIDEVRVKSLKEVKHPKTQTELQSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVTSPPILALPNPGLPYEVDTDASAKQVGCALFQSSEDGERHPIGYWSRSLNVHERNYSVSEKECLAVVWALDTLRPYLMGTRFKVHTDHACLRWLLEISEPSGRLMRWRLRLSEFDFEILYKKGKLNTQADALSRLGTTAETEPYEDDDIPCFMVSDLEGGAQPLTDDVCDDILVNESLDSPTGSFIPISPEEMIREQQLDPFCTRIRARLNGGFQLPFEDDDQGYLIRTVGPRPRIVVPHTLQQRVLHLTHYLKVGAHPGGRKLYLTLTRDFYWPAMAFDCYAVKRACANFAKNDVKLRKHSKKLTLFPARAPLEFVAIDILGEFIRTPRGHRYLLVISDRFSKLTRTVPLKRITAATVAQAFLTHWVFVYGPPVQLLSDNGGQFASKFFQDVCRILDVRNLFVTTYHPQRNGQVERFNRTILNALRSYVADHPKNWDLYTDAITYAYNTQVHRVTSLSPFELVL 576
            YLGH++R G L +D  R  +L++V++P+TQT+L+SFLGLCNVYRRFVP++A IA PLN+LL KGQPV+LE F +    AF  L +A+ +PP+L LP   LPY V+TDAS  Q+G ALFQ+    +R PI ++SR+L   ERNYSVSEKECLAV+WA+ TLRPYL G  F VHTDHA LRWL+ +++PSGRL+RWRLRLS+FDFEI YKKGK N+QADALSRL T  ET    DD+IPCF+    EG                            +  EE    Q  D    R      GG          G      GPRPR+                 K+G  PG ++      + FYWP MA DCYAV + CA  A+  VKLR+++ ++ LF  +APLEFVAIDILGE I T RG+RY+LVISDR+SKL RTVPLK+I+ A +AQAF+ HWVF+YGPPV+LLSDNG QF ++FFQ+VCRIL +RN+F  TYHPQ NGQVE FNRT+ +ALR YV +HPK+WDL++DA+T +YNTQVHR T+++PFELVL
Sbjct:   30 YLGHVVRPGTLEVDAARTVALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIAHPLNQLLKKGQPVQLEGFDEPCEKAFHKLKDAILAPPVLVLPKENLPYSVETDASDYQIGAALFQTHPGAQRKPIEFFSRTLAAAERNYSVSEKECLAVIWAVQTLRPYLYGEHFIVHTDHASLRWLMNVTDPSGRLIRWRLRLSKFDFEIKYKKGKANSQADALSRLRTAGETVDEIDDEIPCFIAEPAEG---------------------------TVEDEESENVQHGDRGTRRNSMPYCGGVCT------SGNTTIVKGPRPRV-------------KPLRKIGRPPGRQETLQDNQKIFYWPTMALDCYAVAKNCAACARERVKLRRNTNEMKLFTPKAPLEFVAIDILGELITTKRGNRYILVISDRYSKLVRTVPLKKISVAHIAQAFVHHWVFLYGPPVKLLSDNGTQFTARFFQNVCRILGIRNVFTNTYHPQANGQVEGFNRTLTSALRKYVGEHPKDWDLFSDAVTLSYNTQVHRTTNITPFELVL 535          
BLAST of Gchil8592.t1 vs. uniprot
Match: R7Q800_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7Q800_CHOCR)

HSP 1 Score: 578 bits (1491), Expect = 7.630e-197
Identity = 292/576 (50.69%), Postives = 370/576 (64.24%), Query Frame = 0
Query:    4 LRDAGINLKLKKCEFFTDSVKYLGHIIRHGQLSIDEVRVKSLKEVKHPKTQTELQSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVTSPPILALPNPGLPYEVDTDASAKQVGCALFQSSEDGERHPIGYWSRSLNVHERNYSVSEKECLAVVWALDTLRPYLMGTRFKVHTDHACLRWLLEISEPSGRLMRWRLRLSEFDFEILYKKGKLNTQADALSRLGTTAETEPYEDDDIPCFMVSDLEGGAQPLTDDVCDDILVNESLDSPTGSFIPISPEEMIREQQLDPFCTRIRARLNGGFQLPFE---DDDQGYLIRTVGPRPRIVVPHTLQQRVLHLTHYLKVGAHPGGRKLYLTLTRDFYWPAMAFDCYAVKRACANFAKNDVKLRKHSKKLTLFPARAPLEFVAIDILGEFIRTPRGHRYLLVISDRFSKLTRTVPLKRITAATVAQAFLTHWVFVYGPPVQLLSDNGGQFASKFFQDVCRILDVRNLFVTTYHPQRNGQVERFNRTILNALRSYVADHPKNWDLYTDAITYAYNTQVHRVTSLSPFELVL 576
            L  AG+ LKL+KCEFF + +KYLGH++R G L +D  R  +L++V +P+TQT+L+SFL LC VYRRFVP++A IA PLN+LL KGQPV                                            Q+  ALFQ+  D +R PIG++SR+L   ERNYSVSEKECLAV+WA+ TLRPYL G  F VHT HA LRWL+ +++PSGRL+RWRLRLSEFDFEI YKKGK N+QADALSRL T  ET    DD+IPCFM    E                             ++PEE+IREQ +DPFC RI+  ++ G    F    ++ +G L RT     ++V+P +L+ RVL L+HY K+  HPGGRKLY TL R FYWP MA DCYAV + CA  A+                                I T RG++Y+LVISDR+SKL RTVPLK+I+AA +AQAF+ +WVFVYGPPV+LLSD G QF ++FFQ+VCRIL +RN+F TTYHPQ +GQVERFN T+ +AL+ YV +HPK+WDL++DA+T AYNTQVHR T+++PFELVL
Sbjct:   39 LEKAGVKLKLRKCEFFVEKIKYLGHVVRPGTLEVDAARTVALEQVPYPQTQTQLRSFLELCGVYRRFVPHYAKIAHPLNQLLKKGQPVH-----------------------------------------DYQISAALFQTHSDAQRKPIGFFSRTLTAAERNYSVSEKECLAVIWAVQTLRPYLYGEHFIVHTGHASLRWLMNVTDPSGRLIRWRLRLSEFDFEIKYKKGKANSQADALSRLRTAGETVEEIDDEIPCFMAEPAEA----------------------------VTPEELIREQAVDPFCNRIKEEMDAGKVRTFSMKTEELEGTLCRTAAEFVQVVIPQSLRDRVLGLSHYAKLAGHPGGRKLYKTLRRYFYWPTMASDCYAVAKNCAACARE-----------------------------RLITTKRGNQYILVISDRYSKLVRTVPLKKISAAHIAQAFVHYWVFVYGPPVKLLSDIGTQFTTRFFQNVCRILGIRNVFTTTYHPQASGQVERFNHTLTSALQKYVGEHPKDWDLFSDAVTLAYNTQVHRTTNMAPFELVL 516          
BLAST of Gchil8592.t1 vs. uniprot
Match: R7QSF8_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSF8_CHOCR)

HSP 1 Score: 555 bits (1430), Expect = 3.030e-191
Identity = 275/505 (54.46%), Postives = 351/505 (69.50%), Query Frame = 0
Query:   68 RRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVTSPPILALPNPGLPYEVDTDASAKQVGCALFQSSEDGERHPIGYWSRSLNVHERNYSVSEKECLAVVWALDTLRPYLMGTRFKVHTDHACLRWLLEISEPSGRLMRWRLRLSEFDFEILYKKGKLNTQADALSRLGTTAETEPYEDDDIPCFMVSDLEGGAQPLTDDVCDDILVNESLDSPTGSFIPISPEEMIREQQLDPFCTRIRARLNGGFQLPFE---DDDQGYLIRTVGPRPRIVVPHTLQQRVLHLTHYLKVGAHPGGRKLYLTLTRDFYWPAMAFDCYAVKRACANFAKNDVKLRKHSKKLTLFPARAPLEFVAIDILGEFIRTPRGHRYLLVISDRFSKLTRTVPLKRITAATVAQAFLTHWVFVYGPPVQLLSDNGGQFASKFFQDVCRILDVRNLFVTTYHPQRNGQVERFNRTILNALRSYVADHPKNWDLYTDAITYAYNTQVHRVTSL 569
            R+FVP +A IA  LN+LL KGQPV++  F +   +AF  L +A+ +PP LALP  GLPY VDTDAS   +G ALFQ+  D +R PIG++SR+L   ERNYSVSEKECLAV+WA+ TLRPYL G  F VHTDH+ LRWL+ +++ SG L+ WRLRLSEFDFEI YKKGK+NT+ADALSRL T  ET    D++IPC M                                           Q + PFC + +  +  G    F    ++ +G L RT     ++V+P +L+ RVL L+HY K+  HP GRKLY TL R F WP MA DCYAV R CA+ A+  VKLRK++K++ LF   APLEFVAIDILGE + T RG+ Y+LVISDR+SKL RTVPLK+I+AA +AQAF+ +WVF+YGPPV+LLSDNG QF +K+FQ++CRIL +RN+F T YHPQ NGQVERFNRTIL+A+R Y+ DHPK+WDL++DA+T+AYNT+VHR T++
Sbjct:   42 RKFVPQYAKIAHLLNQLLKKGQPVQIAEFNEPCNAAFHELKDAILAPPGLALPRKGLPYSVDTDASDYHIGAALFQTHRDAQRKPIGFFSRTLAAAERNYSVSEKECLAVIWAVQTLRPYLYGEHFIVHTDHSSLRWLMNVTDSSGSLILWRLRLSEFDFEIKYKKGKVNTKADALSRLLTKGETSNDVDEEIPCSM-------------------------------------------QDVYPFCIQTKEEMEEGRTNSFTTEAEEFEGILCRTSAEFVQVVIPQSLKDRVLGLSHYAKLAWHPEGRKLYKTLRRSFNWPTMALDCYAVARKCADCARERVKLRKNAKEMQLFTPNAPLEFVAIDILGELMTTSRGNWYILVISDRYSKLVRTVPLKKISAAHIAQAFVHNWVFIYGPPVKLLSDNGTQFTAKYFQNICRILGIRNVFTTKYHPQANGQVERFNRTILSAVRKYIGDHPKDWDLFSDAVTFAYNTKVHRTTNM 503          
BLAST of Gchil8592.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR)

HSP 1 Score: 561 bits (1447), Expect = 8.190e-190
Identity = 289/580 (49.83%), Postives = 375/580 (64.66%), Query Frame = 0
Query:    1 MKNLRDAGINLKLKKCEFFTDSVKYLGHIIRHGQLSIDEVRVKSLKEVKHPKTQTELQSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVTSPPILALPNPGLPYEVDTDASAKQVGCALFQSSEDGERHPIGYWSRSLNVHERNYSVSEKECLAVVWALDTLRPYLMGTRFKVHTDHACLRWLLEISEPSGRLMRWRLRLSEFDFEILYKKGKLNTQADALSRLGTTA-ETEPYEDDDIPCFMVSDLEGGAQPLTDDVCDDILVNESLDSPTGSFIPISPEEMIREQQLDPFCTRIRARLNGGFQLPFEDDDQGYLIRTV---GPRPRIVVPHTLQQRVLHLTHYLKVGAHPGGRKLYLTLTRDFYWPAMAFDCYAVKRACANFAKNDVKLRKHSKKLTLFPARAPLEFVAIDILGEFIRTPRGHRYLLVISDRFSKLTRTVPLKRITAATVAQAFLTHWVFVYGPPVQLLSDNGGQFASKFFQDVCRILDVRNLFVTTYHPQRNGQVERFNRTILNALRSYVADHPKNWDLYTDAITYAYNTQVHRVTSLSPFELVL 576
            ++ L  AG++LKL KC FF  SV YLGH+IR G+L ++   V +++  + P  QTEL+SFLG+CNVYRRFV  FA IATPLN+   K QP E E   DAE +AF  L   + SPPILALP  G  Y +DTDA   QVGCAL Q   DG   PIGYWSR+L   ERNY+ +EKECLAVVW++ TLRPYL G+ F + TDH  LRW+L +++ SGRL RWRLRL+E+D+E+ Y+ G  +  AD +SRL T   +TEP  DD++PCF V   E G++ L D+                        E +REQ  D FC R  A   G     F+ D  G+L+RT    G   R VVP  L+ RVL+L H+ ++  H G  ++Y TL R++YWP MA D  +  R C + A     L K+ K L LFPA  PLEFVA+D+LG   +T  G++++LVI+DRFSKLTR++PL+  TA+ VA AFL +WV+VYG P  +L+DNG QFA+KFF  VC +L VR+   T YHPQ NGQ ERFNRT++  LR YV +H ++WD Y   +T+AYNTQVHR T  +PF+LVL
Sbjct:    8 LRLLHTAGVSLKLAKCAFFDTSVTYLGHVIRPGRLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRRFVQGFAKIATPLNKKTGKNQPYEFEILTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGTRPIGYWSRALTDAERNYTTTEKECLAVVWSILTLRPYLYGSAFNLRTDHEALRWVLNLADSSGRLARWRLRLAEYDYEVQYRPGVKHQLADGVSRLRTDGGDTEPV-DDEVPCFAVQ-YEEGSEALLDN------------------------EFLREQAEDAFC-RFAAETVGTPNSKFDIDRYGFLVRTSPLDGTLQR-VVPTRLRPRVLYLAHHPRLAGHSGATRMYYTLRREYYWPHMASDALSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVL 559          
BLAST of Gchil8592.t1 vs. uniprot
Match: R7QCX0_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCX0_CHOCR)

HSP 1 Score: 530 bits (1365), Expect = 3.820e-182
Identity = 274/484 (56.61%), Postives = 332/484 (68.60%), Query Frame = 0
Query:   55 TELQSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVTSPPILALPNPGLPYEVDTDASAKQVGCALFQSSEDGERHPIGYWSRSLNVHERNYSVSEKECLAVVWALDTLRPYLMGTRFKVHTDHACLRWLLEISEPSGRLMRWRLRLSEFDFEILYKKGKLNTQADALSRLGTTAETEPYEDDDIPCFMVSDLEGGAQPLTD-DVCDDILVNESLDSPTGSFIPISPEEMIREQQLDPFCTRIRARLNGGFQLPFEDDDQGYLIRTVGPRPRIVVPHTLQQRVLHLTHYLKVGAHPGGRKLYLTLTRDFYWPAMAFDCYAVKRACANFAKNDVKLRKHSKKLTLFPARAPLEFVAIDILGEFIRTPRGHRYLLVISDRFSKLTRTVPLKRITAATVAQAFLTHWVFVYGPPVQLLSDNGGQFASKFFQDVCRILDVRNLFVTTYHPQRNGQVERFNRTILNAL 537
            T+L+SFLGLCNVYRRFVP++A IA PLN+LL KGQPV+LE F +    AF  L +A+ +PP+LALP   LPY VDTDA   Q+G ALFQ+  D +R PIG++SR+L   ERNYSVSEKECLA +WA+ TLRPYL G  F VHTDHA LR L+ +++PSGRL+RWRLRLSEFDFEI YKKGK N+QADALSRL T  ET    DD+I CFM    EG  +   + D  DDIL  +             P          P    I ++L+                                 RVL L+HY K+  HPGGRKLY TL R FYWP MA +CYAV + CA  A+  VKLR+++K++ LF  +APLEFVAIDILGE I T RG+RY+LVISDR+SKL RTVPLK+I+AA +AQAF+ HWVFVYGPPV+LLSDNG QF ++FFQ+VCRIL +RN+F TTYHPQ NGQVERFNRT+ +AL
Sbjct:   30 TQLRSFLGLCNVYRRFVPHYAKIAHPLNQLLKKGQPVQLEGFDEPCKKAFHKLKDAILAPPVLALPKKDLPYSVDTDARDYQIGAALFQTHPDAQRKPIGFFSRTLAAAERNYSVSEKECLAEIWAVQTLRPYLYGEHFIVHTDHASLRSLMNVTDPSGRLIRWRLRLSEFDFEIKYKKGKANSQADALSRLQTAGETVDEIDDEILCFMAEPAEGTVEDEDNSDALDDILAFKG-----------GP----------PLIASINSKLD---------------------------------RVLGLSHYAKLAGHPGGRKLYKTLRRYFYWPTMALNCYAVAKNCATCARERVKLRRNTKQMKLFTPKAPLEFVAIDILGELITTKRGNRYILVISDRYSKLVRTVPLKKISAAHIAQAFVHHWVFVYGPPVKLLSDNGTQFTARFFQNVCRILGIRNVFTTTYHPQANGQVERFNRTLTSAL 459          
The following BLAST results are available for this feature:
BLAST of Gchil8592.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QG36_CHOCR2.140e-24360.11Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q4V7_CHOCR2.970e-22354.97Integrase catalytic domain-containing protein n=1 ... [more]
R7QFB9_CHOCR4.010e-22155.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q5U0_CHOCR1.460e-20657.17Integrase catalytic domain-containing protein n=1 ... [more]
R7QL13_CHOCR5.480e-20357.11Integrase catalytic domain-containing protein n=2 ... [more]
R7QJ39_CHOCR4.860e-20253.99Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q800_CHOCR7.630e-19750.69Integrase catalytic domain-containing protein n=2 ... [more]
R7QSF8_CHOCR3.030e-19154.46Integrase catalytic domain-containing protein n=1 ... [more]
R7QN04_CHOCR8.190e-19049.83Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QCX0_CHOCR3.820e-18256.61Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.70coord: 329..405
e-value: 7.4E-10
score: 40.9
NoneNo IPR availablePANTHERPTHR34072ENZYMATIC POLYPROTEIN-RELATEDcoord: 4..246
coord: 346..576
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 127..246
e-value: 2.31438E-59
score: 191.552
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 122..225
e-value: 2.9E-33
score: 114.3
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 419..576
e-value: 3.7E-47
score: 162.2
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 1..37
e-value: 1.7E-7
score: 33.1
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 40..137
e-value: 2.5E-21
score: 77.5
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 423..520
e-value: 3.0E-10
score: 40.3
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 420..576
score: 26.781914
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 349..405
e-value: 8.7E-9
score: 35.3
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..232
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 419..573

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:457867..459597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8592.t1Gchil8592.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 457867..459597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8592.t1 ID=Gchil8592.t1|Name=Gchil8592.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=577bp
MKNLRDAGINLKLKKCEFFTDSVKYLGHIIRHGQLSIDEVRVKSLKEVKH
PKTQTELQSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAE
ASAFTALVNAVTSPPILALPNPGLPYEVDTDASAKQVGCALFQSSEDGER
HPIGYWSRSLNVHERNYSVSEKECLAVVWALDTLRPYLMGTRFKVHTDHA
CLRWLLEISEPSGRLMRWRLRLSEFDFEILYKKGKLNTQADALSRLGTTA
ETEPYEDDDIPCFMVSDLEGGAQPLTDDVCDDILVNESLDSPTGSFIPIS
PEEMIREQQLDPFCTRIRARLNGGFQLPFEDDDQGYLIRTVGPRPRIVVP
HTLQQRVLHLTHYLKVGAHPGGRKLYLTLTRDFYWPAMAFDCYAVKRACA
NFAKNDVKLRKHSKKLTLFPARAPLEFVAIDILGEFIRTPRGHRYLLVIS
DRFSKLTRTVPLKRITAATVAQAFLTHWVFVYGPPVQLLSDNGGQFASKF
FQDVCRILDVRNLFVTTYHPQRNGQVERFNRTILNALRSYVADHPKNWDL
YTDAITYAYNTQVHRVTSLSPFELVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041373RT_RNaseH
IPR036397RNaseH_sf
IPR043128Rev_trsase/Diguanyl_cyclase
IPR001584Integrase_cat-core
IPR041588Integrase_H2C2
IPR043502DNA/RNA_pol_sf
IPR012337RNaseH-like_sf