Gchil8312.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8312.t1
Unique NameGchil8312.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length822
Homology
BLAST of Gchil8312.t1 vs. uniprot
Match: A0A2V3J0N6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0N6_9FLOR)

HSP 1 Score: 390 bits (1003), Expect = 1.970e-125
Identity = 211/389 (54.24%), Postives = 270/389 (69.41%), Query Frame = 0
Query:  443 FQEYVSGEDDREDSIIRELLTKSKTPTAESVLSLISDCT-----NRDRGVRHDSYNMGLKKLPSERLAAVSTARCLYELHCGQVKFLVPLVDMLGTGVVSSEAVLAVADVSDSWDMGIDRESFRMNSIIDPLMSPLHYSYALEAVVRAVADLPEQDIVRVMRHAIHLADAAKIEEGNGDMLST-----KRSHKQTAHVRLERARRLFEVCLECCTDTDQMIRAVRRLPFSDIITFLNHFRTYLTSSTAVTAVEESTRTELPKALKALQFGAVEVAFGVDSAVSFRGIRKWVDNERLTKRKRRAFLMKGCISWACCTIDAHLSTLILDESGRKLAEQLLQAVKERRKESQGLKELQGLTGHLVNKKGVPSGPDALYNTRVVLVPRDAALL 821
            F+ ++S ED+RED++IR+LLTKS TPTAE++++LI + T     +  RG   +  +MGL KLPSERLAAV+ ARCLYEL  G  KFLVPL+DM+GTGVVS+EAVLAVAD+SDSW MG DR  FR+ SI+DPL++ + YS+ALE V+  V DLP+ D VRV+RH + L +    ++ NG M +        SH      RL R +RL E C EC  D +Q I +VRRLPFSDI+  L  F+  L   +  +  E+     L K LK LQ G  +VAF  D+A  +RG+  W+DN+R TKR+RRA   +GCI+W C  IDAHLSTLILD+SGR+LAEQLLQAVKERRK  + LK L+GL GHL ++K VP GPDALYN R++LVP D  LL
Sbjct:    2 FEAHISSEDEREDNLIRDLLTKSATPTAEALMALIREETRTAPAHARRGRNREHNSMGLSKLPSERLAAVTVARCLYELQSGDTKFLVPLIDMIGTGVVSNEAVLAVADISDSWGMGNDRMPFRLQSIVDPLLASVEYSHALEGVISTVGDLPQLDFVRVLRHVVRLLEETSAKKENGVMKANGLARPHESHSSETRKRL-RCQRLLERCFECSIDKEQSILSVRRLPFSDIVMILRRFKIILGEMSPSSDREDL--QVLAKPLKGLQCGMKDVAFTGDAAKCYRGVSNWIDNDRFTKRRRRAIWTQGCIAWTCHMIDAHLSTLILDDSGRELAEQLLQAVKERRKGLEQLKSLEGLAGHLAHRKAVPFGPDALYNRRMLLVPPDVGLL 387          
BLAST of Gchil8312.t1 vs. uniprot
Match: R7QNQ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNQ2_CHOCR)

HSP 1 Score: 317 bits (811), Expect = 5.220e-92
Identity = 234/732 (31.97%), Postives = 371/732 (50.68%), Query Frame = 0
Query:  133 LFTVLV------SERGQVAVVHDSTGEPLLCDKSGFN----------LSLEHVLNVSSTGNNLVSVIGRTKGCLHLYILRLRHLQTSDSIELSCSAPVLISEPSEHPSNLP--GTRQTRIIDIALKSRSLCVLYEGG--HLCFFELRPSAASVSPAANGLDFFSAPFQATPKSPQLAA-------------VMYHALVLRASQS---PQASPRAGDGGAPGGFVESVWR---DFFVVGYGRFISVWDQQYVCGHGFALVDHDIRRICATPTDAGEATFVSDRGLHELSISNRTASGAVSLAMVLKRKALCDEVVERVTLGMMKAPLQSHPLSIAPIKAAADADSDSTKRFQEYVSGEDDREDSIIRELLTKSKTPTAESVLSLISDCTNRD----RGVRHDSYNMGLKKLPSERLAAVSTARCLYELHCGQVKFLVPLVDMLGTGVVSSEAVLAVADVSDSWDMGIDRESFRMNSIIDPLMSPLHYSYALEAVVRAVADLPEQDIVRVMRHAIHLADAAKIEEGNGDMLSTKRSHKQTAHVRLERARRLFEVCLECCTDTDQMIRAVRRLPFSDIITFLNHFRTYLTSSTAVTAVEESTRTELPKALKALQFGAVEVA-FGVDSAVSFRGIRKWVDNERLTKRKRRAFLMKGCISWACCTIDAHLSTLILDESGRKLAEQLLQAVKERRKESQGLKELQGLTGHLVNKKGVPSGPDALYNTRVVLVPRDAAL 820
            +F++LV       + G V VV  STGE  L   +G +          L ++ V+ VS + +  + + G  K  + ++ + +R  ++   + L   AP+ +  P    S+LP  G++   I+D+      + +LY  G  HL    LRP               S+ FQ+T KS +LAA             +     V R S S    +AS            V ++ R   ++F +GYGR +S+WD  Y  GHG    D  I  +C +          +  G+ ELS++    S + SL + + RK  CD +   +       P+++ P++++  K AA+A+ ++++ F++ +   D +E  +  ++L + +T + ES+L L    T       RG R    N+GL +LPSERLAA + ARCLYE+H G   F V L+DM+GTGVVSSEAVLAV   SDSW    + ++  + SI+DPL+    Y+ ALEAVV  VADLPE D+VR +++A+    A  +E G+   +       +    +L R  +L   C+    D  ++I ++R++P  D+I  L+     L      T V+++ + + P   K +   +   A F      S+RGI  W+DN+    R      ++GCI W+   IDAHL+TLI+DESGR++A +L   V+ RRKE + ++ L GLT HL+  KGVPS  D LY+ + + VP  A+L
Sbjct:  116 VFSILVVPGVAAEDDGDVIVVVSSTGELALLCATGHDGEIESRTLDSLLVDTVIAVSRSEDGCIFIAGTMKSKVVVFPVFVRGGKSFAEMSLQRYAPIQL--PPAQKSHLPRGGSQGGSIVDVLCDDLYMVILYTDGIVHL----LRP--------------LSSTFQSTSKSERLAAWYEGRDTTSSDPVMSLLERVFRLSSSITEDEASSALSPMQPKNNHVSNLVRLDSNYFAIGYGRCVSIWDWAYHIGHGLVETDGSIHFLCPSRRQTNIMIGCAS-GMQELSVAEAEQSISFSLGLAVSRKGTCDFIETELYRAPDFVPMRAQPVTVSVTKLAAEAEGNASQLFRKKLESLDTQELQLANQVLNRLETNSPESILKLTKRFTVAHKRIRRGNRGKRSNLGLSELPSERLAAATVARCLYEIHLGNPAFAVSLIDMIGTGVVSSEAVLAVLGTSDSWVGADEGQALTLLSIVDPLLKSDLYANALEAVVTRVADLPEPDVVRTVQYAVRSTQAEFLEFGSASTIPDSDDGSRKVE-KLSRMTKLLLKCVSSAVDRGRVIASLRQIPILDVIGILSRLDHILNG----TGVDKNAKDDPPSGAKRVSGVSKPFAQFNRQEIASYRGIGNWMDNDDKRGRHLCKSGIEGCIEWSSHLIDAHLATLIMDESGREVASRLHNTVRRRRKELESVRGLHGLTTHLLEGKGVPSQTDPLYSIKTLNVPAYASL 821          
BLAST of Gchil8312.t1 vs. uniprot
Match: A0A2V3IXT9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXT9_9FLOR)

HSP 1 Score: 198 bits (504), Expect = 2.040e-52
Identity = 129/418 (30.86%), Postives = 226/418 (54.07%), Query Frame = 0
Query:    1 MDISVTPSLVQSDISAVAKHNHSIVLSCFASHTHTSSSLLLATRNQQQWKTSPISHALPNVSHFKH-AHMSFGTQLAHIYVSLPDVSNHIFVLSRGNASTEYHLHNTLQTSFESPVLAMCNVCQPASTPDQPRLFTVLVSERGQVAVVHDSTGEPLLCDKSGFNLSLEHVLNVSSTGNNLVSVIGRTKGCLHLYILRLRHLQTSDSIELSCSAPVLISEPSEHPSNLPGTRQTRIIDIALKSRSLCVLYEGGHLCFFELRPSAASVSPAANGLDFFSAPFQATPKSPQLAAVMYHALVLRASQSPQASPRAGDGGAPGGFVESVWRDFFVVGYGRFISVWDQQYVCGHGFALVDHDIRRICATPTDAGEATFVSDRGLHELSISNRTASGAVSLAMVLKRKALCDEVVERVTLGMMKA 417
            MD+ +  SL Q  I  V + N  + + C     ++ ++L  A +    W+   +S A   V+  K  A +  G++   +Y++  D    + V S    S  Y L  T++  F SP+L +  + +      Q + F + +S+ G++ ++ ++  +  +  +   +LSL+ VL VS   ++ V++IG+  G   L ++R   L+T +SIEL  S+P+ + E S  P+N    R+T ++D ALK   LCVL++GG++CFF+ +  A S SPA  G+DFFS P+Q  PK+  L+    HA+ L +S    A   + +     GFV++V  +FF VGYG+++S+WD +Y+  H +   D  IR+  +  + +G   FV++ G+ E+    + +SG VSL M +KRK  C  +++ +   M K+
Sbjct:    1 MDVVIRKSLSQPAILDVTEKNGILTMIC---EENSGTALFYAEQTNGIWEKHRLSIADQAVAGQKFGAFVKVGSRDRFVYLASKDAGT-VCVFSGSELSGSYTLRKTVKDVFVSPILGLW-ILKNNRKRTQHQCFLLAISQTGEILLIDENNDKLPIRIEKALSLSLDRVLKVSQIRDDSVALIGQKDGNHQLCMVRFGSLETLESIELFHSSPLSLFEDSRIPANHSNGRRTEVMDFALKRHCLCVLFQGGYVCFFKAQ-RADSHSPAMTGMDFFSLPYQQDPKAAPLSVCFAHAVTLHSSLD--ADEMSDEDFENSGFVDNVEENFFTVGYGKYVSIWDSEYLVLHKYVQADSAIRKRSSGISTSGRF-FVTEEGVQEVITPPKKSSGRVSLGMAMKRKEECSALLQDIHQTMEKS 409          
BLAST of Gchil8312.t1 vs. uniprot
Match: A0A7S2ZLA9_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLA9_9RHOD)

HSP 1 Score: 69.7 bits (169), Expect = 1.530e-8
Identity = 74/330 (22.42%), Postives = 135/330 (40.91%), Query Frame = 0
Query:  485 RGVRHDSYNMGLKKLPSERLAAVSTARCLYELHCGQVKFLVPLVDMLGTGVVSSEAVLAVADVSDSWDMGIDRESFRMNSIIDPLMSPLHYSYALEAVVRAVADLPEQDIVRVMRHAIHLADAAKIEEGNGDMLSTKRSHKQTAHVRLERARRLFEVCLECCTDTDQMIRAVRRLPFSDIITFLNHFRTYLTSSTAVTAVEESTRTELPKALKALQFGAVEVAFGVDSAVSFRGIRKWVDNERLTKRKRRAFLMKGCISWACCTIDAHLSTLILDESGRKLAEQLLQAVKERRKESQGLKELQGLTGHLVNKKGVPSGPDALYNTRVVLV 814
            +G+   +    +   PSERLA+ + ARC+ E+  G++ FL  L  ++ TG VS  A+ A    S S       E  R+       +     +  L+ V++ V D+ E++ V V  HA+    A + +E  G                      L E C+   TD  ++  A++ L   D+   ++     + S+    A + ST       L    FG                       E  +++  R   ++  + W  C IDAH S+LIL++        +L++ +E R+  + L+  +G+  HL+ +K +P  P   +  + + +
Sbjct:  371 QGLNGTNARHSIADAPSERLASAAAARCVEEIDHGKLDFLPALASIVRTGSVSLYALTASYS-SLSGKASTSAELLRV-------LYKRETASVLQEVLKHVRDVHEREYVTVTSHALAWMRAGEDDEAEG----------------------LIECCVTHSTDPRRLTHALKLLTMRDVNDLIDILDRTVFSNFWSAADDLSTEV-----LNESYFG-----------------------ESPSRKLGRP--IENALVWLSCLIDAHFSSLILEQDSVDRLLSVLKSSREARRLCEALEPFEGMIDHLIKRKDLPVAPRPAFEVQTLFL 640          
The following BLAST results are available for this feature:
BLAST of Gchil8312.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J0N6_9FLOR1.970e-12554.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QNQ2_CHOCR5.220e-9231.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IXT9_9FLOR2.040e-5230.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2ZLA9_9RHOD1.530e-822.42Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042859Nucleolar protein 11PANTHERPTHR15633UNCHARACTERIZEDcoord: 579..795

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:1484975..1487440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8312.t1Gchil8312.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 1484975..1487440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8312.t1 ID=Gchil8312.t1|Name=Gchil8312.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=822bp
MDISVTPSLVQSDISAVAKHNHSIVLSCFASHTHTSSSLLLATRNQQQWK
TSPISHALPNVSHFKHAHMSFGTQLAHIYVSLPDVSNHIFVLSRGNASTE
YHLHNTLQTSFESPVLAMCNVCQPASTPDQPRLFTVLVSERGQVAVVHDS
TGEPLLCDKSGFNLSLEHVLNVSSTGNNLVSVIGRTKGCLHLYILRLRHL
QTSDSIELSCSAPVLISEPSEHPSNLPGTRQTRIIDIALKSRSLCVLYEG
GHLCFFELRPSAASVSPAANGLDFFSAPFQATPKSPQLAAVMYHALVLRA
SQSPQASPRAGDGGAPGGFVESVWRDFFVVGYGRFISVWDQQYVCGHGFA
LVDHDIRRICATPTDAGEATFVSDRGLHELSISNRTASGAVSLAMVLKRK
ALCDEVVERVTLGMMKAPLQSHPLSIAPIKAAADADSDSTKRFQEYVSGE
DDREDSIIRELLTKSKTPTAESVLSLISDCTNRDRGVRHDSYNMGLKKLP
SERLAAVSTARCLYELHCGQVKFLVPLVDMLGTGVVSSEAVLAVADVSDS
WDMGIDRESFRMNSIIDPLMSPLHYSYALEAVVRAVADLPEQDIVRVMRH
AIHLADAAKIEEGNGDMLSTKRSHKQTAHVRLERARRLFEVCLECCTDTD
QMIRAVRRLPFSDIITFLNHFRTYLTSSTAVTAVEESTRTELPKALKALQ
FGAVEVAFGVDSAVSFRGIRKWVDNERLTKRKRRAFLMKGCISWACCTID
AHLSTLILDESGRKLAEQLLQAVKERRKESQGLKELQGLTGHLVNKKGVP
SGPDALYNTRVVLVPRDAALL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042859NOL11