Gchil8201.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8201.t1
Unique NameGchil8201.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length465
Homology
BLAST of Gchil8201.t1 vs. uniprot
Match: A0A2V3IY43_9FLOR (Putative F-box/LRR-repeat protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY43_9FLOR)

HSP 1 Score: 455 bits (1170), Expect = 2.740e-154
Identity = 304/460 (66.09%), Postives = 346/460 (75.22%), Query Frame = 0
Query:    1 MTCQRSRCSSP--FVRLGPDVFELLLAHLCGEPLNGAISTDAYRRLLPFAICCTHQYRLTRAAVNGLSLLPLRFTQRPAARPALPVPPFPVALYSFYSPAYRHYTNSSSCSAVVFRNPHRGSASLLDLHLPRALATFPNLRSLHVYRTTRLSDHGFETLILSLPALRELVVNANRHLTIDAIRRLPACKQLHTLQLSYCTGLGDDACAEAAQIISGIASLRTLSVAYWNITDAFVERIAHLPNLSSLDLSLCKRLTSRSCMHLASYAPNLHTFKMRCSPHLTDCGVRALAECSNLHFLNLSLCRRISDDALQLMADARKMPHLHTVLXXXXQALTDTAVTFLSSNRNIRRLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANALCSAARTAPYNMVDVRKCVQISMAALSSLSAKCVTLRSALHNQI 458
            M  Q   CSSP  FV LGPDVFELLL +LCGEPL+ AISTDAYRRLLPFAICCT  Y LT   + GLSLLPL FTQR   R A PVPPFPVALYSFYSPAY HY N SS  A+ F        S LD+HLPRA+ +FPNLR+LH+YRTTRLS+ GF  LILSLP LREL+V+AN HLT+DAIR LP+C QL TL+LSYCTGLG +   E  Q+I+ +  LRTLSVAYWNI D FVE ++HLP+L +LDLS+C RLTSRSC HLA  A  L   K RCS HLTD G+RALA CSNL  +N SL RRISD  +Q+  DA+ MP+LHTVL      LTD  V+ LSSN+ IRRLDL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            Y+ VD+R C  IS+ AL++LS++C TL+SAL  ++
Sbjct:    1 MHAQSPACSSPSPFVDLGPDVFELLLGYLCGEPLSTAISTDAYRRLLPFAICCTQHYDLTIRCIKGLSLLPLHFTQRSTVRSAPPVPPFPVALYSFYSPAYHHYGNQSSRHALGFSAQSPSRTSSLDVHLPRAVKSFPNLRTLHIYRTTRLSNQGFNALILSLPNLRELLVSANHHLTLDAIRDLPSCSQLQTLELSYCTGLGGEQSVEGGQLIARLTHLRTLSVAYWNIADQFVEHVSHLPHLETLDLSMCNRLTSRSCFHLARNAKRLRNLKFRCSMHLTDSGLRALAACSNLESVNFSLARRISDAGVQVFGDAQAMPNLHTVLLSQCHMLTDAGVSHLSSNQAIRRLDLSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSVDLRNCCDISVTALTNLSSRCQTLKSALQEKV 460          
BLAST of Gchil8201.t1 vs. uniprot
Match: UPI001CC7D5F9 (uncharacterized protein LOC122667321 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC7D5F9)

HSP 1 Score: 72.0 bits (175), Expect = 1.040e-9
Identity = 68/235 (28.94%), Postives = 102/235 (43.40%), Query Frame = 0
Query:  123 LLDLHLPRALATFPNLRSLHVYRTTRLSDHGFETLILSLPALRELVVNANRHLTIDAIRRLPAC--KQLHTLQLSYCTGLGDDACAEAAQIISGIASLRTLSVA-YWNITDAFVERIA--HLPNLSSLDLSLCKRLTSRSCMHLASYAPNLHTFKMRCSPHLTDCGVRALAE-CSNLHFLNLSLCRRISDDALQLMADARKMPHLHTVLXXXXQALTDTAVTFLSSNRNIRRLDL 351
            +L   L ++  T P L ++ +    RLSD G + L+ S PALR + +     +T D+I  L       L  L +  C  +       A   +  +A L  LSVA   N+ D FV  +   H PN+  L    C+ LT  S    A     L +  +     LTDC +  LA  C ++H LNLS     SD+A+    +A         L    +    TA++    +R ++RLDL
Sbjct:  400 ILRTTLAQSPNTLPALATISLKGACRLSDVGLKALVASAPALRSINLGMCSFVTSDSINILADSLGSSLRELYIDDCQNVDAMMILPA---LKKLAHLEVLSVACVRNVCDDFVSELVAVHGPNMKKLSFLGCRELTDTSLKVTAETCSGLCSLDLGNLCKLTDCAMAYLANGCQSIHTLNLSR-NAFSDEAIAAFLEASGESLTKLWLNNVTKVGHHTAISLARCSRKLQRLDL 630          
BLAST of Gchil8201.t1 vs. uniprot
Match: UPI0018857F0D (uncharacterized protein LOC119099002 n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018857F0D)

HSP 1 Score: 69.3 bits (168), Expect = 7.730e-9
Identity = 60/205 (29.27%), Postives = 91/205 (44.39%), Query Frame = 0
Query:  132 LATFPNLRSLHVYRTTRLSDHGFETLILSLPALRELVVNANRHLTIDAIRRLPACKQLHTLQLSYCTGLGDDACAEAAQIISGIASLRTLSVAYWNITDAFVERIAHLPNLSSLDLSLCKRLTSRSCMHLASYAPNLHTFKMRCSPHLTDCGVRALAECSNLHFLNLSLCRRISDDALQLMADARKMPHLHTVLXXXXQALTDTA 336
            L   P LR+L +  + R++   F  L  S   +  L V++   LT  ++R+L  C QL  L +S   G+     A+ A  ++  A L  L+    ++T       A LP L  LD+S    +T  + +HL   AP LHT  M+     T+ G+  L     LH L+LS  R +SD  L  +   + +  LH        A   TA
Sbjct:  436 LRYLPRLRALDLKTSGRVTGRCFSLLPAS---MERLSVSSCGALTSASLRQLTNCPQLRELDVS---GVVRLEAADLAAALAACAQLERLAARRLSLTPQAYLPPAGLPALRILDVSFSDGVTDATLLHLVDLAPGLHTLHMQGCSLPTENGLALLRRLKELHVLDLSYVRAVSDALLDRL-HGKALTELHLAEGHSGPAAFSTA 633          
BLAST of Gchil8201.t1 vs. uniprot
Match: UPI0002C32C39 (uncharacterized protein LOC101312489 n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0002C32C39)

HSP 1 Score: 66.2 bits (160), Expect = 7.830e-8
Identity = 70/244 (28.69%), Postives = 119/244 (48.77%), Query Frame = 0
Query:  105 SSSCSAVVFRNPHRGSASLLDLHLPRALATFPNLRSLHVYRTTRLSDHGFETLILSLPAL-RELVVNANRHLTIDAIRRLPACKQLHTLQLSYCTGLGDDACAE-AAQIISGIA-SLRTLSVAYW-NITDAFVERIAHL-PNLSSLDLSLCKRLTSRSCMHLASYAPNLHTFKMRCSPHLTDCGVRALAECS----------------------------NLHFLNLSLCRRISDDALQLMADA 315
            S++C   +      G+  L D+ L   +++ P LRSL++ + + L+    +TL  SL +L +EL +N  +  +IDA++ LPA K+   L++ +  G+ ++ C +   + IS    +L+ LS+    N+TD+ V+ +A     L +LDL    +LT  S  +LA+    + T K  C    +D  V A  E S                            NLH L+LS CR ++D+AL L+ D+
Sbjct:  606 SANCLPSLVSLSLSGACRLSDVGLGALVSSVPALRSLNLSQCSLLTSSSIDTLANSLGSLLKELYLNDCQ--SIDAMQILPALKKFEHLEVLWLPGI-ENVCDDFIKEFISARGHNLKELSLTDCINLTDSSVKVLAETCSGLCALDLFNLHKLTDYSLGYLANGCRAIQTLKF-CRNSFSDEAVAAFLETSGECLKELSLNNITKVGDNTAISLARHSRNLHCLDLSWCRNLTDEALGLIVDS 845          
BLAST of Gchil8201.t1 vs. uniprot
Match: UPI0010A4116F (uncharacterized protein LOC114742937 isoform X1 n=4 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4116F)

HSP 1 Score: 65.1 bits (157), Expect = 1.760e-7
Identity = 71/242 (29.34%), Postives = 103/242 (42.56%), Query Frame = 0
Query:  128 LPRALATFPNLRSLHVYRTTRLSDHGFETLILSLPALRE-------LVVNANRHLTIDAIRRLPACKQLHTLQLSYCTGLGDDACAEAAQIISGIASLRTLSV----AYWNITDAFVER--IAHLPNLSSLDLSLCKRLTSRSCMHLASYAPNLHTFKMRCSPHLTDCGVRALAE-CSNLHFLNLSLCRRISDDA----LQLMADARKMPHLHTVLXXXXQALTDTAVTFLSSNRNIRRLDL 351
            L +A    P L SL +    RLSD G  TL+ S PALR        L+ + + ++  D++  L     L  L L  C G+      +AAQI+  +  L  L V        I D F++   IA   N+  L L  C +LT  S   +A + P L    +     LTD  +  L   C  L  L L  C   SD+A    L+ + ++ K   L+ V          TA++  S  +N+  LDL
Sbjct:  544 LAQAPGHLPRLTSLSLSGACRLSDEGLHTLVSSAPALRSINLSQCSLLTSTSLYILADSLGSL-----LRELYLDDCQGI------DAAQIVPALMKLEHLEVLSVAGIQTICDDFIKDYIIARGHNMKELVLKDCVKLTDLSIKVIAEHCPQLCALDLMNLTKLTDSSMVYLTNGCQALRMLKLR-CNAFSDEAVAAFLETVGESLKELSLNNVRKVGRH----TALSLASHAKNLHTLDL 769          
BLAST of Gchil8201.t1 vs. uniprot
Match: A0A662XJS4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XJS4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.980e-7
Identity = 54/172 (31.40%), Postives = 85/172 (49.42%), Query Frame = 0
Query:  148 RLSDHGFETLILSL-PALRELVVNANRHLTIDAIRRLPACKQLHTLQLSYCTGLGDDACAEAAQIISGIASLRTLSVAYWN-ITDAFVERIAH-LPNLSSLDLSLCKRLTSRSCMHLASYAPNLHTFKMRCSPHLTDCGVRALAE--CSNLHFLNLSLCRRISDDALQLMAD 314
            RLSD G E L+    P+L    ++ N+ +T  +I      +QLH+L LS C  L DDA  +A   +  + +LR L++     ++D F+  +A  L +L  L ++ C +LT                     S   TD  + AL E   S+L  L++S CR+IS+DAL ++ D
Sbjct:  274 RLSDVGCEALVRRCAPSLDAFEISCNQRITKQSIDYFCELQQLHSLTLSECPQL-DDASLKA---LGSMKNLRKLALNQMERLSDEFIGNLARSLQDLQELSIARCSQLTD--------------------SAQATDASMLALQEFCASSLQTLDISFCRKISEDALGILTD 421          
BLAST of Gchil8201.t1 vs. uniprot
Match: A0A3E0MYV3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0MYV3_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 5.270e-7
Identity = 48/161 (29.81%), Postives = 72/161 (44.72%), Query Frame = 0
Query:  187 KQLHTLQLSYCTGLGDDACAEAAQIISGIASLRTLSVAYWNITDAFVERIAHLPNLSSLDLSLCKRLTSRSCMHLASYAPNLHTFKMRCSPHLTDCGVRALAECSNLHFLNLSLCRRISDDALQLMADARKMPHLHTVLXXXXQALTDTAVTFLSSNRNIR 347
            K L  L L+Y      DA  E  +    +  L  L  +   ITDA +  I     L  L LS    +T  +C  L ++AP L    M C   +TD GV A+ E  NL  L+L  C+ IS+DA+  +     + ++  V       L+++ V  L   +N+R
Sbjct:  132 KNLQYLNLNYVYAT-TDAVLEELRACRELIGLSLLCCS--KITDAGINAITESTQLEVLLLSDFPEITDVTCKRLKTHAPKLRELAMACLDDITDDGVAAIRELPNLEKLSLDSCKAISEDAILQLTKMVSLKYMQLV----NMKLSESTVDRLQRVKNVR 285          
BLAST of Gchil8201.t1 vs. uniprot
Match: A0A2G9GVA9_9LAMI (Leucine rich repeat protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GVA9_9LAMI)

HSP 1 Score: 63.2 bits (152), Expect = 6.900e-7
Identity = 60/229 (26.20%), Postives = 100/229 (43.67%), Query Frame = 0
Query:  128 LPRALATFPNLRSLHVYRTTRLSDHGFETLILSLPALRELVVNANRHLTIDAIRRLPACKQLHTLQLSYCTGLGDDACAEAAQIISGIASLRTLSVA-YWNITDAFVERIAHL--PNLSSLDLSLCKRLTSRSCMHLASYAPNLHTFKMRCSPHLTDCGVRALAE-CSNLHFLNLSLCRR-ISDDALQLMADARKMPHLHTVLXXXXQALTDTAVTFLSSNRNIRRLDL 351
            L ++ ++F +L  L +    RLSD G + ++ S PALR + V     LT DAI  +      +  +L Y  G            +     L  LSVA    +TD  V  +  +   ++  LD + C  LT  S + + S  P+LH+  +     LTD G+  LA+ C ++    L LCR   SD+A+    +         +L         TA++  + ++ +  LD+
Sbjct:  478 LSKSSSSFASLAVLSLRGACRLSDTGLKDIVTSAPALRSINVGQCTLLTCDAINFIADVLGSNLREL-YIDGCPKINATRILPALKKFKDLEVLSVAGLRTVTDQVVSEMITVFGKSIKELDFANCLELTDSSLIEIGSNCPDLHSLNISNVARLTDLGMGYLADGCRSIR--KLKLCRNSFSDEAMAAFLECSGGSLTELLLNNMTMVGPLTALSLANRSKKLISLDI 703          
BLAST of Gchil8201.t1 vs. uniprot
Match: A0A6V7J3D2_9HYME (F-box domain-containing protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7J3D2_9HYME)

HSP 1 Score: 60.1 bits (144), Expect = 2.960e-6
Identity = 66/227 (29.07%), Postives = 94/227 (41.41%), Query Frame = 0
Query:  112 VFRNPHRGSASLLDLHLPRALATFPNLRSLHVYRTTRLSDHGFETLILSLPALRELVVNANRHLTIDAIRRLPACKQLHTLQLSYCTGLGDDACAEAAQI-----------ISGIASLRTLSVAYWNITDAFVERIA-HLPNLSSLDLSLCKRLTSRSCMHL----ASYAPNLHTFKMRCSPHLTDCGVRALAECSNLHFLNLSLCRRISDDALQLMADARKMPHLH 322
            ++R      A L   HL       P   SL     T ++      L+  LP LR L +       + A+R    C  L TL LS+ +GL D +  E                S +  L+ LS+A  +ITD  +  +  HLPNL +LD+S C RLT      L    A    NL +  +     LT+  +  L  C  L  L+L    ++S  A+   A AR M +LH
Sbjct:   93 LWRRMDMSQAHLTASHLTGIARRQPESLSLD---WTNIAKRQLAWLLGRLPQLRTLSLKGCTWAGVCALRTCT-CPPLVTLDLSHVSGLNDASLREVLSPPTDSRPGLIDKTSRLKHLKNLSLAGCDITDIALRYVTQHLPNLETLDVSTCGRLTDAGVAQLTTSPAMAINNLVSLNLXXXRLLTETSLDHLTRCKALKRLDLRHTTQVSTQAVIKFA-ARSMHNLH 314          
BLAST of Gchil8201.t1 vs. uniprot
Match: A0A1B6K075_9HEMI (JmjC domain-containing protein n=5 Tax=Homalodisca TaxID=139475 RepID=A0A1B6K075_9HEMI)

HSP 1 Score: 61.2 bits (147), Expect = 3.060e-6
Identity = 52/187 (27.81%), Postives = 88/187 (47.06%), Query Frame = 0
Query:  147 TRLSDHGFETLILSLPALRELVVNANRHLTIDAIRRLPACKQLHTLQLSYCTGLGD-----------DACAEAAQIISGIASLRTLSVAYWNITDAFVERIA-HLPNLSSLDLSLCKRLTSRSCMHLASYAPNLHTFKMRCSPH-----LTDCGVRALAECSNLHFLNLSLCRRISDDALQLMADAR 316
            T ++      L++ LP ++EL +     L   A+R    C  L +L LS+ TGL D           D+        S +  L TL +A  +++D  +  +  +LPNLS+LD+S C RLT      LA++ P    F + C        LT+  +  L+ C +L  ++L    +IS +A++  A ++
Sbjct:  844 TPIAKRQLTWLVVRLPQMKELSLQGCSWLGASALRTCT-CPPLTSLDLSFVTGLNDASLRDLLSPPPDSRPGLVDTKSRLRHLHTLKLAGCDLSDVSLRYVVQNLPNLSTLDMSSCPRLTDAGVAQLATH-PASTIFTLTCLDLAGCRLLTETSLEYLSRCHSLQRVDLRHIVQISAEAIEKFASSK 1028          
The following BLAST results are available for this feature:
BLAST of Gchil8201.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2V3IY43_9FLOR2.740e-15466.09Putative F-box/LRR-repeat protein n=1 Tax=Gracilar... [more]
UPI001CC7D5F91.040e-928.94uncharacterized protein LOC122667321 n=1 Tax=Telop... [more]
UPI0018857F0D7.730e-929.27uncharacterized protein LOC119099002 n=2 Tax=Polli... [more]
UPI0002C32C397.830e-828.69uncharacterized protein LOC101312489 n=1 Tax=Fraga... [more]
UPI0010A4116F1.760e-729.34uncharacterized protein LOC114742937 isoform X1 n=... [more]
A0A662XJS4_9STRA3.980e-731.40Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A3E0MYV3_9BACT5.270e-729.81Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2G9GVA9_9LAMI6.900e-726.20Leucine rich repeat protein n=1 Tax=Handroanthus i... [more]
A0A6V7J3D2_9HYME2.960e-629.07F-box domain-containing protein (Fragment) n=1 Tax... [more]
A0A1B6K075_9HEMI3.060e-627.81JmjC domain-containing protein n=5 Tax=Homalodisca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 186..211
e-value: 3.2
score: 16.8
coord: 239..264
e-value: 0.0039
score: 26.4
coord: 393..418
e-value: 28.0
score: 11.1
coord: 135..160
e-value: 4.4
score: 16.3
coord: 368..392
e-value: 48.0
score: 9.2
coord: 344..367
e-value: 210.0
score: 4.1
coord: 318..343
e-value: 14.0
score: 13.4
coord: 290..315
e-value: 1.2
score: 18.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 117..339
e-value: 4.9E-36
score: 126.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 340..464
e-value: 2.2E-14
score: 55.1
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 342..365
e-value: 0.19
score: 11.9
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 207..419
NoneNo IPR availablePANTHERPTHR13382:SF7F-BOX AND LEUCINE-RICH REPEAT PROTEIN 17coord: 207..419
coord: 134..200
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 134..200
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 126..421

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:673731..675125 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8201.t1Gchil8201.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 673731..675125 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8201.t1 ID=Gchil8201.t1|Name=Gchil8201.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=465bp
MTCQRSRCSSPFVRLGPDVFELLLAHLCGEPLNGAISTDAYRRLLPFAIC
CTHQYRLTRAAVNGLSLLPLRFTQRPAARPALPVPPFPVALYSFYSPAYR
HYTNSSSCSAVVFRNPHRGSASLLDLHLPRALATFPNLRSLHVYRTTRLS
DHGFETLILSLPALRELVVNANRHLTIDAIRRLPACKQLHTLQLSYCTGL
GDDACAEAAQIISGIASLRTLSVAYWNITDAFVERIAHLPNLSSLDLSLC
KRLTSRSCMHLASYAPNLHTFKMRCSPHLTDCGVRALAECSNLHFLNLSL
CRRISDDALQLMADARKMPHLHTVLLSQCQALTDTAVTFLSSNRNIRRLD
LSYCEALTDHIAYSLSTMYNLQDIDLSGCSGITDNVVMALLNCKSLTNIS
VAFCLGLTDHSANALCSAARTAPYNMVDVRKCVQISMAALSSLSAKCVTL
RSALHNQITLSTCP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt