Gchil8169.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil8169.t1 vs. uniprot
Match: A0A2V3IRQ4_9FLOR (DNA repair protein XRCC2-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRQ4_9FLOR) HSP 1 Score: 327 bits (838), Expect = 1.280e-108 Identity = 165/310 (53.23%), Postives = 220/310 (70.97%), Query Frame = 0
Query: 1 MADDEVSKFIAKRLGTYPSSSSN-TEDNMGPIIATGIGILDEIQQHAVRLGSLVDISGVSMSGKTQLLHAITAHILLKHPGGTRPSVCWFDLNRGLDPNRLRHLMRSKRCKSPSASSDAHIDGLHGLSVYYPFSTIAMCSSLHALLDFISTEEGEGVNTVVIDSLGSFHYIDKYAFEKRATHTQVTKQSHELVLCKVLEMLLSTRKVAVFVSKSCLFDETKLDVSWPFPHAGEPSIPRDFMPDLWKKITTHMVLMYHIE-ISKDTEGDCKRGIIAMKRTEPLRPLIRKAVVTAAAVAVIDDEGIRVESMH 308
M+ D VS+ IA RLGT+ + T D ++ TG+ +LDE + VRLGSL+D++GVS+SGKTQ+LH I A+ LL G P VCW+DLNRGLDPNRLR ++ SK+ + S ++ I L GL VY P ST+++C+S+H L F+S E G GV TV+IDSLGSFHY+DKY F+ + KQS ELVL +VLE +LS RKV V+VSKSCLFDE KLD+ WPFP AG PS+P+DFMPDLWK +T+H++LMYHIE S D +RG++AM +P + LIRK VV +A++A I+++G+ ES+H
Sbjct: 1 MSPDPVSRAIAARLGTFAIPRNRLTVDRGAAVVRTGLAVLDETRDMPVRLGSLIDVTGVSLSGKTQVLHFIAAYALLNRTCGNGPVVCWYDLNRGLDPNRLRQMIISKQRQGGSNVTERDISDLDGLLVYRPSSTLSLCASIHDLKRFLSAE-GAGVQTVIIDSLGSFHYMDKYEFDSGLRDSSTMKQSIELVLARVLEPILSLRKVVVYVSKSCLFDEVKLDIPWPFPRAGVPSMPKDFMPDLWKNLTSHIILMYHIESTSSDYNNGARRGVVAMYYKDPQKNLIRKPVVGSASLATINNDGLFFESLH 309
BLAST of Gchil8169.t1 vs. uniprot
Match: R7Q2X9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2X9_CHOCR) HSP 1 Score: 119 bits (298), Expect = 5.310e-29 Identity = 66/152 (43.42%), Postives = 89/152 (58.55%), Query Frame = 0
Query: 156 VNTVVIDSLGSFHYIDKYAFEKRATHTQVTKQ-SHELVLCKVLEMLLSTRKVAVFVSKSCLFDETKLDVSWPFPHAGEPSIPRDFMPDLWKKITTHMVLMYHIEISKDTEG----DCKRGIIAMKRTEPLRPLIRKAVVTAAAVAVIDDEGI 302
V V+ID+LG+FHY+DK+ + ++E VL VL LL ++KV VF SKS LF+E L V WPF AG PSIPR+FMP W+ I+ H VL+Y + E D +RGI+++ R E IR+ VTAA+ ID +GI
Sbjct: 35 VRNVIIDALGTFHYLDKFQISTSDVREKAPGSGTNEFVLVNVLRELLKSQKVIVFASKSALFEEEALGVKWPFSQAGIPSIPREFMPSSWRSISLHTVLLYFTADGRSAEAHERIDQRRGIVSLLRNED-NSFIREMTVTAASTIRIDSDGI 185
BLAST of Gchil8169.t1 vs. uniprot
Match: UPI000B7829FA (DNA repair protein XRCC2 homolog isoform X1 n=4 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B7829FA) HSP 1 Score: 70.1 bits (170), Expect = 5.180e-10 Identity = 65/281 (23.13%), Postives = 129/281 (45.91%), Query Frame = 0
Query: 39 LDEIQQHAVRLGSLVDISGVSMSGKTQLL-HAITAHILLKHPGGTRPSVCWFDLNRGLDPNRLRHLMRSK---RCKSPSASSDAHIDGLHG---LSVYYPFSTIAMCSSLHALLDFISTEEGEGVNTVVIDSLGSFHYIDKYA--FEKRATHTQ-VTKQSHELVLCKVLEMLLSTRKVAVFVSKSCLF------DETKLDVSWPF-PHAGEPSIP--------RDFMPDLWKKITTHMVLMYHIEISKDTEGDCKRGIIAMKRTEPLRPLIRKAVVTAAAV 294
L Q+ +R+G++V++ G S KT +L A IL KH GG V + DL+ D RL ++R++ K+ S + ++ + + Y +A +LH L +G GVN ++IDS+G+FH++D+ + F A + + ++ Q+ + + + ++ L+ + V +K+ + +E K ++ P P + S+ R++MP +W+ T +L+ + TE + + + + P + +V A V
Sbjct: 39 LPPFQKFPLRVGNVVELVGPSPCAKTHILMQAAIDCILPKHYGGLGHLVLFIDLDCRFDILRLSQMLRNRIFQANKNQSNDEELFVECMRRFLYIRCYDTLEFLATLKTLHYQLQKERQAQGIGVNFLMIDSIGAFHWVDRASTSFHLGANNRKGLSLQNVSVTVVQEIKKLVLVHPMLVIAAKATILGNRYAANEVKWNLKRPCSPDSAASSVTNKVHQLMYREYMPSIWQSFVTLRILIQASDDHISTENNHNKSVYLSEWLMPPLSFVDSFIVKDAGV 319
BLAST of Gchil8169.t1 vs. uniprot
Match: UPI000B77FC2F (DNA repair protein XRCC2 homolog isoform X2 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B77FC2F) HSP 1 Score: 67.8 bits (164), Expect = 3.100e-9 Identity = 59/241 (24.48%), Postives = 116/241 (48.13%), Query Frame = 0
Query: 39 LDEIQQHAVRLGSLVDISGVSMSGKTQLL-HAITAHILLKHPGGTRPSVCWFDLNRGLDPNRLRHLMRSK---RCKSPSASSDAHIDGLHG---LSVYYPFSTIAMCSSLHALLDFISTEEGEGVNTVVIDSLGSFHYIDKYA--FEKRATHTQ-VTKQSHELVLCKVLEMLLSTRKVAVFVSKSCLF------DETKLDVSWPF-PHAGEPSIP--------RDFMPDLWKKITTHMVLM 254
L Q+ +R+G++V++ G S KT +L A IL KH GG V + DL+ D RL ++R++ K+ S + ++ + + Y +A +LH L +G GVN ++IDS+G+FH++D+ + F A + + ++ Q+ + + + ++ L+ + V +K+ + +E K ++ P P + S+ R++MP +W+ T +L+
Sbjct: 39 LPPFQKFPLRVGNVVELVGPSPCAKTHILMQAAIDCILPKHYGGLGHLVLFIDLDCRFDILRLSQMLRNRIFQANKNQSNDEELFVECMRRFLYIRCYDTLEFLATLKTLHYQLQKERQAQGIGVNFLMIDSIGAFHWVDRASTSFHLGANNRKGLSLQNVSVTVVQEIKKLVLVHPMLVIAAKATILGNRYAANEVKWNLKRPCSPDSAASSVTNKVHQLMYREYMPSIWQSFVTLRILI 279
BLAST of Gchil8169.t1 vs. uniprot
Match: A0A2G5BCH6_COERN (Rad51 domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BCH6_COERN) HSP 1 Score: 62.4 bits (150), Expect = 1.800e-7 Identity = 44/152 (28.95%), Postives = 77/152 (50.66%), Query Frame = 0
Query: 34 TGIGILDEIQQHAVRLGSLVDISGVSMSGKTQLLHAITAHILLKHPGGTRPSVCWFDLNRGLDPNRLRHLMRSKRCKSPSASSDA-HIDGLHGLSVYYPFSTIAMCSSLHALLDFISTEEGEGVNTVVIDSLGSFHYIDKYAFEKRATHTQV 184
TG+ +D + ++V+++G + SGKTQ L+ I A L G R V + D++ +D +L MR+ +A DA + L + V+ P +T+A+ ++L L ++ V VV+D LGS H+ID ++ A H ++
Sbjct: 41 TGVEAIDAALRQTDGTQTVVELAGTAGSGKTQTLYRICAAHALAGADGERGHVVFVDVDGRMDVRQLAQTMRA------TAGDDAVAAEALQRVHVFAPATTVALIATLATLGVYVGARRAR-VTAVVVDGLGSNHWID----QREAAHVRL 181
BLAST of Gchil8169.t1 vs. uniprot
Match: A0A5N5HES0_9ROSA (DNA repair protein XRCC2-like protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5HES0_9ROSA) HSP 1 Score: 58.2 bits (139), Expect = 8.610e-6 Identity = 59/250 (23.60%), Postives = 111/250 (44.40%), Query Frame = 0
Query: 38 ILDEIQQHAVRLGSLVDISGVSMSGKTQLLHAITAHILLK------HPGGTRPSVCWFDLNRGLDPNRLRHLMRSKRCKSPSASSDAHIDGLHGLSV--------YYPFSTIAMCSSLHALLDFISTEEGEGVNTVVIDSLGSFHYIDKYAF------EKRATHTQVTKQSHELVLCKVLEMLLSTRKVAVFVSKSCLFD------ETKLDVSWPFPH------AGEPSIP-RDFMPDLWKKITTHMVLM 254
++ + + +R+G++V++ G S S KT +L + +L H GG V + DL+ D RL +++ R P+ S + + +GL L + Y +A ++H L E + ++IDS+GSFH+ID+ + EKR +++ QS + + + L + V +K + E K + S+P + +P R++MP +W+ TH +L+
Sbjct: 311 LIPPLHRVPLRVGNVVELVGPSSSAKTLILIQAAVNCILPKEWNGVHYGGLERLVMFLDLDCRFDVLRLSEMLKL-RIMEPNGSMN-YDEGLFNLCMRRFLYVRCYDSLQFLATLKTMHYRLRKEKEEHHVSIYLLMIDSIGSFHWIDRGSTFFPLGGEKRK---RLSLQSVSDAVVQEIRKLQLVHPMLVITTKEIILGNAYGAYEAKQNTSFPEVSDLRNSTSNTQQLPYREYMPSVWQSFVTHKLLV 555 The following BLAST results are available for this feature:
BLAST of Gchil8169.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil8169.t1 ID=Gchil8169.t1|Name=Gchil8169.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=312bpback to top |