Gchil8128.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8128.t1
Unique NameGchil8128.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length477
Homology
BLAST of Gchil8128.t1 vs. uniprot
Match: A0A2V3IM37_9FLOR (HMG box-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM37_9FLOR)

HSP 1 Score: 329 bits (844), Expect = 2.260e-106
Identity = 208/476 (43.70%), Postives = 259/476 (54.41%), Query Frame = 0
Query:    1 MSTSPAFTTSPPLSPTRQKRREQILNLAGRRGWLVAPRAASVVEACHSAWKAGTLPEVSFIPSPPSCQNTGTQSADSDGSESELKPSSTSITSPNSNNPSPTCERIDLLCGSLSDMNVNRNKARDTRPISLLSDPYRSEPAAYKSVENNAAVLELQRHWVGRRKFLSKQTESSSINRGNNDASVSKLSSDSNCTIPLTTSQGRNAMQPPSVDRLGGNIAGNQPPSRRGHARDPPSPMLQHLRCNINVHVHAKTTPLGPTPFQDPAP-RNAQSPFQRSPRRTVDASHLVSEQQQAGLKFSHQWLHPGSFLKTRDASARSLLRMFDRALFEGALTSDIRPKV---TLGWNARLNRTAGITKMKQIPTTGERRATIELSTKVIDEPDRLYKTLAHELCHAAAWIIDNTSKPPHGAVFKSWAERFRQWDANLKITRCHDYEINYKYNYKCVKCSHTYGRHSKSIDTTKKVCGVCRSTLKL 472
            M+TSPAF+ SPPLSP+ Q RREQ+L++A +RGWLVAPRA+ V++ACH+AWKAGTLPEVS IPSP         SA S  + S+   S T   S +SN+ SP  ++ID LC +LSD+ V         P S L   + S P +  S+  N             RKF S +  S                                    PS D                                              T ++D    RN Q          ++   +V E   A LK S +WL PG FLKTR+  A  LL++ D  +  GALT +    V   TL WN+RL +TAG+T MK+  +TGER+A IELS KV+DEP RLY TLAHE+CHAA WIIDN +KPPHG+VFKSWA+RF +WD++LKIT CHDY I YKYNY+CVKC+ TYGRHSKSIDTTKKVCG CR TL+L
Sbjct:    1 MTTSPAFSPSPPLSPSLQVRREQVLHIAEKRGWLVAPRASQVLDACHAAWKAGTLPEVSPIPSP--------SSASSSDAHSQHLASLTPTLSSSSNHYSPGSDQIDQLCENLSDLRVQGE------PRSPL---FFSPPLSENSMCAN-------------RKFPSARRNS------------------------------------PSKDLF--------------------------------------------TSYRDTQDGRNLQG---------IEDEAIVCEPSPACLKRSSEWLLPGPFLKTRERCAEKLLQILDHEVLNGALTREKGNSVSGVTLAWNSRLYKTAGVTYMKKKASTGERKAAIELSMKVVDEPVRLYNTLAHEMCHAATWIIDNCAKPPHGSVFKSWAKRFHEWDSSLKITTCHDYAIRYKYNYQCVKCTTTYGRHSKSIDTTKKVCGRCRGTLQL 357          
BLAST of Gchil8128.t1 vs. uniprot
Match: R7Q2I3_CHOCR (SprT-like domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2I3_CHOCR)

HSP 1 Score: 219 bits (559), Expect = 1.850e-62
Identity = 176/491 (35.85%), Postives = 234/491 (47.66%), Query Frame = 0
Query:    4 SPAFTTSPPLSPTRQ-KRREQILNLAGRRGWLVAPRAASVVEACHSAWKAGTLPEVSF--IPSPPSCQNTGTQSADSDGSESELKPSSTSIT-SPN---SNNPSPTCERIDLLCGSLSDMNVNRNKARDTRPISLLSDPYRSEPAAYKSVENNAAVLELQRHWVGRRKFLSKQTESSS----------INRGNNDASVSKLSSDSNCTIPLTTSQGRNAMQPPSVDR-LGGNIAGNQPPSRRGHARDPPSPMLQHLRCNINVHVHAKTTPLGPTPFQDPAPRNAQSPFQRSPRRTVDASHLVSEQQQAGLKFSHQW--LHPGSFLKTRDASARSLLRMFDRALFEGALTSDIRPK--VTLGWNARLNRTAGITKMKQIPTTGERRATIELSTKVIDEPDRLYKTLAHELCHAAAWIIDNTSKPPHGAVFKSWAERFRQWDANLKITRCHDYEINYKYNYKCVKCSHTYGRHSKSIDTTKKVCGVCRSTLKL 472
            SPAFT  PP  PT     R  ++     R WL AP    + E+  +AW+AG LPEV F  +PSP S Q+  +  + S  S      SS S+  SP+   S++    C R++ +   L    +N N   D  P S  + P   +  +    +  A V   Q H          ++E+ S          + R    AS  +  S S+ +   +   G    +P S  R +  +I G     RR    D      +     ++       T L   P   P  ++            VDA H +       LK +  W  L    F   R+ +A  LL  FD+ +  G L  D+ PK  VT+ W+ RL +TAGIT+MK++ + G R A IELS KV+DEP RLY TLAHELCHAAAWIID+  KPPHG  FK W+  F  WD  L IT CH+YEI YK+ YKC  C   YGRHSKSIDT  KVCG CR  L+L
Sbjct:    3 SPAFT--PPSPPTLSPSSRRLVMKNTRDRSWLHAPALRQLAESSLAAWRAGALPEVPFLPVPSPSSPQSLRSSLSSSQKSLPGSLSSSPSLRDSPSGYDSDDLDSLCRRVEAV---LDTARLNSNLRVDISPPSSTA-PSSDQAESQLDSDFEAQVWVTQGHAAAIHTPSPVRSEADSDDIDEFILRTVRRRRAAASAFESRSSSDESEEGSDYSGSRRYRPRSPPRQVFKDITGKNSSFRRDSVDDDGDDSGEEDM--VDGLCRGIVTKLRFPPDSPPRYKSLD----------VDAGHNLLP----ALKGAVNWFGLSTLPFQHLRERAADRLLIFFDKEVLSGRLVRDLAPKQKVTVAWSGRLTKTAGITRMKRL-SCGTRTAAIELSEKVVDEPVRLYNTLAHELCHAAAWIIDDCFKPPHGDQFKRWSTIFNDWDHKLVITTCHEYEIRYKFKYKCRDCGQVYGRHSKSIDTNVKVCGKCRGRLQL 470          
BLAST of Gchil8128.t1 vs. uniprot
Match: UPI001E1DB0B9 (uncharacterized protein LOC123544359 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB0B9)

HSP 1 Score: 192 bits (489), Expect = 1.690e-52
Identity = 92/184 (50.00%), Postives = 123/184 (66.85%), Query Frame = 0
Query:  302 LHPGSFLKTRDASARSLLRMFDRALFEGALTSDIRPKVTLGWNARLNRTAGITKMKQIPTTGE-------------RRATIELSTKVIDEPDRLYKTLAHELCHAAAWIIDNTSKPPHGAVFKSWAERFRQWDANLKITRCHDYEINYKYNYKCVKCSHTYGRHSKSIDTTKKVCGVCRSTLKL 472
            L+   F   R+ +AR LL  FD  + +GAL+  +  +    WN RL +TAG+T M+Q   T +             R A IELSTKV+DEP RLY+TLAHE CHAAAWI+D  ++PPHG  F++WA+RF +WD  L I+RCH+Y I ++Y Y C +C++ YGRHSKSIDTTK+VCG C+S L+L
Sbjct:  250 LNRAMFANQREGAARRLLDYFDAQVLDGALSGLVNVR----WNKRLLKTAGLTYMRQCAATPDCSYAAAGAADIALRTAVIELSTKVVDEPFRLYQTLAHEACHAAAWIVDGVTRPPHGPGFQAWAKRFHRWDRELSISRCHNYAIRFRYTYACTQCAYEYGRHSKSIDTTKQVCGKCKSALRL 429          
BLAST of Gchil8128.t1 vs. uniprot
Match: A0A7S1ERS7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERS7_9RHOD)

HSP 1 Score: 167 bits (422), Expect = 8.610e-45
Identity = 83/172 (48.26%), Postives = 106/172 (61.63%), Query Frame = 0
Query:  306 SFLKTRDASARSLLRMFDRALFEGALTSDIRPKVTLGWNARLNRTAGITKMKQIPTTGE-----RRATIELSTKVIDEPDRLYKTLAHELCHAAAWIIDNTSKPPHGAVFKSWAERFRQWDANLKITRCHDYEINYKYNYKCVKCSHTYGRHSKSIDTTKKVCGVCRSTLKL 472
            +F + R     +L+  FD+ +F   L+S      TL W+ RLN+TAGIT+M++     E     R A IELS KV+D  DRLY TLAHELCHAA W ID    P HG  FK W ++  ++D+ L I RCH Y INYK+NY+C  C H YGRHSKS++   + CG CR TL L
Sbjct:   96 AFRRNRVQIGEALMSHFDKKVFGSRLSSS----TTLEWSRRLNKTAGITRMRRHGKASEDGTHSRTAVIELSVKVVDRMDRLYSTLAHELCHAAQWTIDLDDNPKHGQSFKKWTKKCSRFDSELSIERCHSYAINYKFNYQCSSCMHIYGRHSKSVNLDTQRCGKCRGTLTL 263          
BLAST of Gchil8128.t1 vs. uniprot
Match: A0A7S0ZBS0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBS0_9RHOD)

HSP 1 Score: 159 bits (401), Expect = 1.500e-41
Identity = 77/152 (50.66%), Postives = 98/152 (64.47%), Query Frame = 0
Query:  322 FDRALFEGALTSDIRPKVTLGWNARLNRTAGITKMKQIPTT--GERRATIELSTKVIDEPDRLYKTLAHELCHAAAWIIDNTSKPPHGAVFKSWAERFRQWDANLKITRCHDYEINYKYNYKCVKCSHTYGRHSKSIDTTKKVCGVCRSTLK 471
            F+R  F G L    R + +L WN+R  R+AG+T+  +  ++    R A IELS+KV+D P+RLY TL HE+CHAA W+IDN SKPPHG  F+ WA R  + D  L +   HDYEI +KY Y+C  C   YGRHS SID  K+VCG CR  LK
Sbjct:  126 FEREAFGGML----RDRTSLFWNSRFRRSAGMTRFLEDRSSFPPRRHAAIELSSKVVDRPERLYATLIHEMCHAAQWVIDNESKPPHGESFRRWASRCLELDPELSVQTRHDYEIEFKYKYECQNCHLVYGRHSASIDIRKRVCGKCRGKLK 273          
BLAST of Gchil8128.t1 vs. uniprot
Match: A0A5J4YLD9_PORPP (HMG box-containing protein C19G7.04 n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLD9_PORPP)

HSP 1 Score: 159 bits (401), Expect = 3.270e-41
Identity = 88/197 (44.67%), Postives = 112/197 (56.85%), Query Frame = 0
Query:  281 VDASHLVSEQQQAG--LKFSHQWLHPGSFLKTRDASARSLLRMFDRALFEGALTSDIRPKVTLGWNARLNRTAGITKMKQIPTTGERRATIELSTKVIDEPDRLYKTLAHELCHAAAWIIDNTSKPPHGAVFKSWAERFRQWDANLKITRCHDYEINYKYNYKCVK--CSHTYGRHSKSIDTTKKVCGVCRSTLKLT 473
            V A  L     Q G  L F  +     +F + R+  A  L   +   +F       +R  V + WN RL +TAG+T+  Q  TTG R A IELS KV+D  +RL  TLAHELCHAA WI+D   +P HGA FK WA +  Q+D  L I+RCH Y+I YK+ Y+C    C  +YGRHSKSID  +  CG CR  L+LT
Sbjct:  118 VHAVSLAEPVNQVGYDLAFLQREFSEHAFKRHREELANQLTAYYCAHIFG----VRVREHVHVAWNKRLCKTAGVTRAAQDGTTGLRTARIELSWKVVDRTERLRNTLAHELCHAAQWIVDREKRPDHGASFKLWALKAAQFDPTLLISRCHSYQIAYKFVYRCTNAACGVSYGRHSKSIDLQRSACGKCRGRLELT 310          
BLAST of Gchil8128.t1 vs. uniprot
Match: L1J2G6_GUITC (SprT-like domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J2G6_GUITC)

HSP 1 Score: 152 bits (384), Expect = 2.070e-40
Identity = 75/153 (49.02%), Postives = 96/153 (62.75%), Query Frame = 0
Query:  323 DRALFEGALTSDIRPKVTLGWNARLNRTAGITKMKQIPTTGERRAT---IELSTKVIDEPDRLYKTLAHELCHAAAWIIDNTSKPPHGAVFKSWAERFRQWDANLKITRCHDYEINYKYNYKCVKCSHTYGRHSKSIDTTKKVCGVCRSTLKL 472
            +R +F+G L  D+     +GW+ RLN TAG+T  K+    G        +ELSTKVID+ ++L +TL HELCH AAW+++ T KPPHG  FK WA         +K+T CH+YEI YKY Y+CV C   YGRHSKSI+     CGVCR TL L
Sbjct:    3 NRRIFQGKLPKDL----IIGWSTRLNTTAGVTIFKRNKNGGGIHGFDVHVELSTKVIDDTEKLRQTLCHELCHVAAWVVNGTRKPPHGKAFKYWASISAARYPGIKVTTCHNYEIAYKYRYQCVLCHKEYGRHSKSINVETARCGVCRGTLML 151          
BLAST of Gchil8128.t1 vs. uniprot
Match: E1ZHB3_CHLVA (SprT-like domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZHB3_CHLVA)

HSP 1 Score: 151 bits (382), Expect = 3.170e-40
Identity = 76/164 (46.34%), Postives = 103/164 (62.80%), Query Frame = 0
Query:  309 KTRDASARSLLRMFDRALFEGALTSDIRPKVTLGWNARLNRTAGITKMKQIPTTGERRATIELSTKVIDEPDRLYKTLAHELCHAAAWIIDNTSKPPHGAVFKSWAERFRQWDANLKITRCHDYEINYKYNYKCVK--CSHTYGRHSKSIDTTKKVCGVCRSTL 470
            K R+     L + F+R +FEG L + +     L WNARL  TAG+T  ++        A +ELS+KV+D   +L +TL HELCH AAW++++T+KPPHG VFK+WA++  +   +L IT CH YEI Y + ++C    C   YGRHS SID  KKVCG CRS L
Sbjct:    3 KQREELTAQLFQEFNRTVFEGQLPAGLE----LRWNARLLTTAGLTHYRREIPDDPYTARVELSSKVLDGFSKLERTLCHELCHVAAWLVNHTAKPPHGPVFKAWADKAMRLYTHLDITTCHAYEIFYPFRWQCTNSGCLQEYGRHSNSIDVAKKVCGACRSPL 162          
BLAST of Gchil8128.t1 vs. uniprot
Match: A9UUZ8_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UUZ8_MONBE)

HSP 1 Score: 156 bits (394), Expect = 1.620e-38
Identity = 77/168 (45.83%), Postives = 106/168 (63.10%), Query Frame = 0
Query:  307 FLKTRDASARSLLRMFDRALFEGALTSDIRPKVTLGWNARLNRTAGITKMKQIPTTGERRATIELSTKVIDEPDRLYKTLAHELCHAAAWIIDNTSKPPHGAVFKSWAERFRQWDANLKITRCHDYEINYKYNYKCV--KCSHTYGRHSKSIDTTKKVCGVCRSTLKL 472
            F ++R+  A  L + ++  +F+  L  D+  K    W+ RLN TAG   ++    TG R A+IELSTKV+D  ++L  TL HELCH AAW+I+  +KPPHG VFK WA R  +   +L IT CH YEI ++Y Y+C   +C H +GRHSKSI+  ++VCG C S L L
Sbjct:  283 FRRSREHLASQLFQEYNVQVFDRQLPQDLELK----WSNRLNTTAGRAVLRLQRATGHRTASIELSTKVVDSKEKLENTLCHELCHVAAWLINGVNKPPHGRVFKGWAARAMRRYRHLNITTCHSYEIEFRYRYQCTNAECGHVFGRHSKSINVDRQVCGRCHSRLIL 446          
BLAST of Gchil8128.t1 vs. uniprot
Match: A0A507CVW5_9FUNG (SprT-like domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CVW5_9FUNG)

HSP 1 Score: 157 bits (396), Expect = 5.850e-38
Identity = 87/205 (42.44%), Postives = 117/205 (57.07%), Query Frame = 0
Query:  277 PRRTVDASHLVSEQQQA-----GLKFSHQWLHPGSFLKTRDASARSLLRMFDRALFEGALTSDIRPKVTLGWNARLNRTAG--ITKMKQIPTTGERRATIELSTKVIDEPDRLYKTLAHELCHAAAWIIDNTSKPPHGAVFKSWAERFRQWDANLKITRCHDYEINYKYNYKCVK--CSHTYGRHSKSIDTTKKVCGVCRSTLKL 472
            P R    +HL +   ++      ++F+ Q      F + R     ++   F++ +F   L +D+    ++ W   LN+TAG   T  + I     R A +ELS KV+D   RL  TLAHELCH AAWIID  + PPHGAVFK W  RF Q   ++++T  H YEI YKY+Y+C    C   YGRHSKSIDTTK+VCGVC+S L L
Sbjct:  388 PARETPQTHLRTWSPESLPPTPSVRFTRQAPTAKRFKQERHTLTLAIYAEFNKKVFRDRLPADL----SITWGNTLNKTAGRTFTTSETIHERTSRSARVELSCKVLDTQWRLRNTLAHELCHVAAWIIDACNSPPHGAVFKKWGARFEQQYDDIEVTTLHSYEIAYKYHYQCTNPACGKVYGRHSKSIDTTKQVCGVCKSRLSL 588          
The following BLAST results are available for this feature:
BLAST of Gchil8128.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IM37_9FLOR2.260e-10643.70HMG box-containing protein n=1 Tax=Gracilariopsis ... [more]
R7Q2I3_CHOCR1.850e-6235.85SprT-like domain-containing protein n=1 Tax=Chondr... [more]
UPI001E1DB0B91.690e-5250.00uncharacterized protein LOC123544359 n=1 Tax=Merce... [more]
A0A7S1ERS7_9RHOD8.610e-4548.26Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0ZBS0_9RHOD1.500e-4150.66Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YLD9_PORPP3.270e-4144.67HMG box-containing protein C19G7.04 n=2 Tax=Porphy... [more]
L1J2G6_GUITC2.070e-4049.02SprT-like domain-containing protein (Fragment) n=1... [more]
E1ZHB3_CHLVA3.170e-4046.34SprT-like domain-containing protein (Fragment) n=1... [more]
A9UUZ8_MONBE1.620e-3845.83Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A507CVW5_9FUNG5.850e-3842.44SprT-like domain-containing protein n=1 Tax=Synchy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006640SprT-likeSMARTSM00731sprt_6coord: 316..473
e-value: 2.2E-36
score: 136.8
IPR006640SprT-likePFAMPF10263SprT-likecoord: 316..430
e-value: 1.6E-28
score: 98.8
IPR035240SprT-like, zinc ribbon domainPFAMPF17283Zn_ribbon_SprTcoord: 436..473
e-value: 1.2E-6
score: 28.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR23099TRANSCRIPTIONAL REGULATORcoord: 73..471

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:90676..92106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8128.t1Gchil8128.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 90676..92106 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8128.t1 ID=Gchil8128.t1|Name=Gchil8128.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=477bp
MSTSPAFTTSPPLSPTRQKRREQILNLAGRRGWLVAPRAASVVEACHSAW
KAGTLPEVSFIPSPPSCQNTGTQSADSDGSESELKPSSTSITSPNSNNPS
PTCERIDLLCGSLSDMNVNRNKARDTRPISLLSDPYRSEPAAYKSVENNA
AVLELQRHWVGRRKFLSKQTESSSINRGNNDASVSKLSSDSNCTIPLTTS
QGRNAMQPPSVDRLGGNIAGNQPPSRRGHARDPPSPMLQHLRCNINVHVH
AKTTPLGPTPFQDPAPRNAQSPFQRSPRRTVDASHLVSEQQQAGLKFSHQ
WLHPGSFLKTRDASARSLLRMFDRALFEGALTSDIRPKVTLGWNARLNRT
AGITKMKQIPTTGERRATIELSTKVIDEPDRLYKTLAHELCHAAAWIIDN
TSKPPHGAVFKSWAERFRQWDANLKITRCHDYEINYKYNYKCVKCSHTYG
RHSKSIDTTKKVCGVCRSTLKLTTAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006640SprT-like_domain
IPR035240SprT_Zn_ribbon