Gchil8058.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8058.t1
Unique NameGchil8058.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length186
Homology
BLAST of Gchil8058.t1 vs. uniprot
Match: A0A2V3IQ91_9FLOR (DNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ91_9FLOR)

HSP 1 Score: 165 bits (417), Expect = 1.550e-46
Identity = 86/134 (64.18%), Postives = 101/134 (75.37%), Query Frame = 0
Query:   52 TILALENEFLEVGYVGAQDSFVATVTVAVKGFEQHSHSVIMISLNNAYSHADLTAFVNRALAAESERSMEIRIDCVVLSLEYQDHELCRALTRGTGRVGDEVTDNVRESLVGSGKVDRIPQPNVPDVLIVRGEV 185
            T LAL+NE  E  YV AQDSF AT  V  K F Q  H+ +M+SL+NAY+HA +TAFVNRALA +SE S E++ID V LSLEYQ+ ELCRAL RGTGR GD++TDNVRESL+G   VD IP  + PD LIVRGEV
Sbjct:  169 TKLALDNEVAEDEYVDAQDSFAATFPVTTKRFAQCRHNALMLSLDNAYNHAHITAFVNRALAVQSEISAEVKIDGVALSLEYQNRELCRALNRGTGRHGDDITDNVRESLMGREVVDSIPDSSAPDFLIVRGEV 302          
BLAST of Gchil8058.t1 vs. uniprot
Match: A0A2V3ITT3_9FLOR (DNA ligase (NAD(+)) n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITT3_9FLOR)

HSP 1 Score: 149 bits (377), Expect = 1.870e-38
Identity = 85/185 (45.95%), Postives = 116/185 (62.70%), Query Frame = 0
Query:    1 MYYADEPKLASLTKSTMNLFFTFWSSRDVFRDSFMMIFEARQFVMAQLTARTILALENEFLEVGYVGAQDSFVATVTVAVKGFEQHSHSVIMISLNNAYSHADLTAFVNRALAAESERSMEIRIDCVVLSLEYQDHELCRALTRGTGRVGDEVTDNVRESLVGSGKVDRIPQPNVPDVLIVRGEV 185
            +YYADEPK     +    L          F +       +           T LALENE +    V AQDSF ATV  + K F Q  H  +M+SL+NAY+++DLTAF+NRA  A+S+ ++E++ID V LSLEY++  LC ALTRGTGR+GD+VT+NVRE+L+G G V+ IP   VPD++++RGEV
Sbjct:  167 LYYADEPKPRISDQEYDELVLHLLELERCFPELIRDDSPSNTVGHGAAVRATKLALENE-ISAEAVDAQDSFYATVPTSTKLFPQRRHRALMLSLDNAYTYSDLTAFMNRASTAKSKIAVELKIDGVALSLEYRNGHLCHALTRGTGRIGDDVTENVREALLGRGVVECIPDAAVPDMVVIRGEV 350          
BLAST of Gchil8058.t1 vs. uniprot
Match: R7QHN1_CHOCR (DNA ligase (NAD(+)) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHN1_CHOCR)

HSP 1 Score: 127 bits (319), Expect = 1.190e-30
Identity = 60/119 (50.42%), Postives = 83/119 (69.75%), Query Frame = 0
Query:   66 VGAQDSFVATVTVAVKGFEQHSHSVIMISLNNAYSHADLTAFVNRALAAESERSMEIRIDCVVLSLEYQDHELCRALTRGTGRVGDEVTDNVRESLVGSGKVDRIPQPNVPDVLIVRGE 184
            + A+DSF ATV +  K F Q+ H  +M+SL+NAY H DL +F  RA  A S+ S E+++D + LSLEY + +L  A TRG GR+G+++TDNVR +LVG G VD I  P  PD+++VRGE
Sbjct:  265 ITARDSFAATVPITEKRFPQYRHKALMLSLDNAYKHDDLVSFARRAADANSDISAELKVDGIALSLEYHNGKLAAAATRGNGRIGEDITDNVRAALVGRGVVDAIEDPLAPDLILVRGE 383          
BLAST of Gchil8058.t1 vs. uniprot
Match: A0A2V3IW52_9FLOR (DNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW52_9FLOR)

HSP 1 Score: 122 bits (305), Expect = 1.170e-29
Identity = 64/132 (48.48%), Postives = 91/132 (68.94%), Query Frame = 0
Query:   54 LALENEFLEVGYVGAQDSFVATVTVAVKGFEQHSHSVIMISLNNAYSHADLTAFVNRALAAESERSMEIRIDCVVLSLEYQDHELCRALTRGTGRVGDEVTDNVRESLVGSGKVDRIPQPNVPDVLIVRGEV 185
            LALE E      V  QD F ATV  +   F Q  H  +M+SL+N Y++++LTAF+  A  A+S+ + E++ID V LSLEY++  LC ALTRGT R+GD+VT+NVRE+L+G G  + IP   VPD++++RGE+
Sbjct:   96 LALEKE-TSAEAVDYQDLFYATVPTSANLFPQRRHRALMLSLDNGYTYSELTAFMKWASLAKSKIAAELKIDGVALSLEYRNGHLCHALTRGTERIGDDVTENVREALLGRGVEECIPDAAVPDMVVIRGEL 226          
BLAST of Gchil8058.t1 vs. uniprot
Match: A0A660UTM2_9BACT (DNA ligase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A660UTM2_9BACT)

HSP 1 Score: 81.6 bits (200), Expect = 9.560e-15
Identity = 48/108 (44.44%), Postives = 64/108 (59.26%), Query Frame = 0
Query:   82 GFEQHSHSVIMISLNNAYSHADLTAFVNRALAAESERS----MEIRIDCVVLSLEYQDHELCRALTRGTGRVGDEVTDNVRESLVGSGKVDRIPQPNVPDVLIVRGEV 185
            GF    H+V M+S++N Y+  +L AF  R       R     +E++ID V ++L Y+   L RA TRG GRVGD+VT NVR   + S  ++    PNVPDVL VRGEV
Sbjct:   28 GFTTVRHAVAMLSIDNTYNADELRAFDERVAKGLGSRDYDYVVELKIDGVAINLRYEGGVLARAATRGDGRVGDDVTANVRT--IKSVPLELFTAPNVPDVLEVRGEV 133          
BLAST of Gchil8058.t1 vs. uniprot
Match: A0A2A4YK59_9BACT (DNA ligase n=1 Tax=Candidatus Aerophobetes bacterium TaxID=2030807 RepID=A0A2A4YK59_9BACT)

HSP 1 Score: 80.1 bits (196), Expect = 3.320e-14
Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 0
Query:   57 ENEFLEVGYVGAQDSFVATVTVAVKGFEQHSHSVIMISLNNAYSHADLTAFVNRALAA----ESERSMEIRIDCVVLSLEYQDHELCRALTRGTGRVGDEVTDNVRESLVGSGKVDRIPQPNVPDVLIVRGEV 185
            E E L   +V A     A      KGF Q +HSV M+SL N+YS  ++  F+ R        + E S E+++D + +SL Y+  +  RALTRG G+VGD++T N+      S     I   N+PDVL +R EV
Sbjct:   43 EIEKLHPDWVSASSPTQAVREKPTKGFYQMAHSVPMLSLANSYSEEEIRDFIKRVYKILPRDDMEYSAELKMDGIAVSLRYEKGKFVRALTRGNGKVGDDITKNIATI---SSLPKAIDTKNLPDVLELRAEV 172          
BLAST of Gchil8058.t1 vs. uniprot
Match: F8L782_SIMNZ (DNA ligase n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) TaxID=331113 RepID=F8L782_SIMNZ)

HSP 1 Score: 77.8 bits (190), Expect = 2.090e-13
Identity = 50/113 (44.25%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   81 KGFEQHSHSVIMISLNNAYSH---ADLTAFVNRALAAES-ERSMEIRIDCVVLSLEYQDHELCRALTRGTGRVGDEVTDNVRESLVGSGKVDRIPQP----NVPDVLIVRGEV 185
            KGF+Q  H V M+SL N YS    AD  A V + L  E  E  +E+++D V LSL Y+D +L RA++RG GR GD++T NV+        +  IP      N+PD+L VRGEV
Sbjct:   66 KGFKQVEHDVPMLSLANTYSREEVADFVARVYKLLEREDVEFCVELKMDGVALSLRYEDGKLVRAVSRGNGRKGDDITANVKT-------IRSIPHELKGTNIPDLLEVRGEV 171          
BLAST of Gchil8058.t1 vs. uniprot
Match: A0A660W842_9BACT (DNA ligase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A660W842_9BACT)

HSP 1 Score: 75.9 bits (185), Expect = 7.310e-13
Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 0
Query:   80 VKGFEQHSHSVIMISLNNAYSHADLTAFVNRALAAESERS----MEIRIDCVVLSLEYQDHELCRALTRGTGRVGDEVTDNVRESLVGSGKVDRIPQPNVPDVLIVRGEV 185
            ++GF   SH+V M+S+NN Y+  +L  F  R       R     ++ +ID V +SL YQ   L +A TRG G+VGD+VT NVR   + S  ++     NVPDVL +RGE+
Sbjct:   67 IEGFRTVSHAVAMLSINNTYNRTELMEFDARVRKGLGGRPFTYFVDPKIDGVAVSLRYQGRMLTQATTRGDGKVGDDVTSNVRT--IKSVPLNLGRAANVPDVLEIRGEI 174          
BLAST of Gchil8058.t1 vs. uniprot
Match: A0A7C7R1S0_9PLAN (NAD-dependent DNA ligase LigA (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7R1S0_9PLAN)

HSP 1 Score: 73.9 bits (180), Expect = 1.350e-12
Identity = 46/110 (41.82%), Postives = 65/110 (59.09%), Query Frame = 0
Query:   80 VKGFEQHSHSVIMISLNNAYSHADLTAFVNR---ALAAES-ERSMEIRIDCVVLSLEYQDHELCRALTRGTGRVGDEVTDNVRESLVGSGKVDRIPQPNVPDVLIVRGEV 185
            V+G  +  H V M+S++N YS  +L  +  R   AL  E  E  +E++ID V +S+ Y+D  L R +TRG GRVGD+VT N+R     +G   R+    +P VL VRGEV
Sbjct:   68 VEGLREVRHRVPMLSIDNTYSIEELRRYAQRTRKALGGEPVEWVVELKIDGVAVSVTYEDGRLVRGVTRGNGRVGDDVTHNIRTV---AGVPLRLTGRRIPPVLEVRGEV 174          
BLAST of Gchil8058.t1 vs. uniprot
Match: A0A5B9QQX0_9BACT (DNA ligase n=1 Tax=Roseimaritima ulvae TaxID=980254 RepID=A0A5B9QQX0_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 3.310e-12
Identity = 48/110 (43.64%), Postives = 65/110 (59.09%), Query Frame = 0
Query:   80 VKGFEQHSHSVIMISLNNAYSHADLTAFVNRALAAESERS----MEIRIDCVVLSLEYQDHELCRALTRGTGRVGDEVTDNVRESLVGSGKVDRIPQPNVPDVLIVRGEV 185
            V   EQ +H + M+S++N YS  +L A+  RA     + +    ME +ID V  S+ Y+D  L RALTRG G+VGD++T N+R   VG G   R+    VP VL VRGEV
Sbjct:   69 VPHLEQVAHRLPMLSIDNTYSLEELAAYFERAAKLLPDETIEWVMEYKIDGVAASIIYEDGLLVRALTRGNGKVGDDITHNIRT--VG-GVPLRLSGDQVPTVLEVRGEV 175          
The following BLAST results are available for this feature:
BLAST of Gchil8058.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQ91_9FLOR1.550e-4664.18DNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448... [more]
A0A2V3ITT3_9FLOR1.870e-3845.95DNA ligase (NAD(+)) n=1 Tax=Gracilariopsis chorda ... [more]
R7QHN1_CHOCR1.190e-3050.42DNA ligase (NAD(+)) n=1 Tax=Chondrus crispus TaxID... [more]
A0A2V3IW52_9FLOR1.170e-2948.48DNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448... [more]
A0A660UTM2_9BACT9.560e-1544.44DNA ligase (Fragment) n=1 Tax=Planctomycetes bacte... [more]
A0A2A4YK59_9BACT3.320e-1437.59DNA ligase n=1 Tax=Candidatus Aerophobetes bacteri... [more]
F8L782_SIMNZ2.090e-1344.25DNA ligase n=1 Tax=Simkania negevensis (strain ATC... [more]
A0A660W842_9BACT7.310e-1340.91DNA ligase (Fragment) n=1 Tax=Planctomycetes bacte... [more]
A0A7C7R1S0_9PLAN1.350e-1241.82NAD-dependent DNA ligase LigA (Fragment) n=1 Tax=P... [more]
A0A5B9QQX0_9BACT3.310e-1243.64DNA ligase n=1 Tax=Roseimaritima ulvae TaxID=98025... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013839NAD-dependent DNA ligase, adenylationPFAMPF01653DNA_ligase_adencoord: 69..185
e-value: 7.7E-20
score: 71.2
NoneNo IPR availableGENE3D3.30.470.30DNA ligase/mRNA capping enzymecoord: 77..185
e-value: 2.1E-21
score: 78.4
NoneNo IPR availableSUPERFAMILY56091DNA ligase/mRNA capping enzyme, catalytic domaincoord: 77..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004435_piloncontigtig00004435_pilon:671057..671614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8058.t1Gchil8058.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004435_pilon 671057..671614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8058.t1 ID=Gchil8058.t1|Name=Gchil8058.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=186bp
MYYADEPKLASLTKSTMNLFFTFWSSRDVFRDSFMMIFEARQFVMAQLTA
RTILALENEFLEVGYVGAQDSFVATVTVAVKGFEQHSHSVIMISLNNAYS
HADLTAFVNRALAAESERSMEIRIDCVVLSLEYQDHELCRALTRGTGRVG
DEVTDNVRESLVGSGKVDRIPQPNVPDVLIVRGEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013839DNAligase_adenylation