Gchil7817.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7817.t1
Unique NameGchil7817.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length241
Homology
The following BLAST results are available for this feature:
BLAST of Gchil7817.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..240
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 134..144
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..240
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..133
NoneNo IPR availableCDDcd00030C2coord: 2..116
e-value: 1.0306E-15
score: 68.6327
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
IPR000008C2 domainSMARTSM00239C2_3ccoord: 1..113
e-value: 2.2E-12
score: 57.1
IPR000008C2 domainPFAMPF00168C2coord: 2..113
e-value: 3.0E-16
score: 59.6
IPR000008C2 domainPROSITEPS50004C2coord: 1..115
score: 14.881561
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 1..142
e-value: 1.3E-19
score: 72.5
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 2..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004401_piloncontigtig00004401_pilon:403018..403740 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7817.t1Gchil7817.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004401_pilon 403018..403740 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7817.t1 ID=Gchil7817.t1|Name=Gchil7817.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=241bp
MLTITVHSARDLRNADAEEGGSSDAFVLVCFDNKTDQELGRTATVENSQN
PTWEHEMQVDVAKHVQSVVDDGLDEPKMITFCVYDADESESEPLGVAGLS
FSELVKKGKIKEQELPVFLGEGFVTVSVALKKVKKSSMLTDDGMLKVAGG
VVGVAALGVAGGYLFQRYQKKKERLAEEEEAAAEVVYDGEGDAGRTGLAF
GYNEDSDEEEEDKKGDIKKWWQMEDENDDDDDDNRWGDAY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf