Gchil7728.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7728.t1
Unique NameGchil7728.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length323
Homology
BLAST of Gchil7728.t1 vs. uniprot
Match: A0A2V3J4L9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4L9_9FLOR)

HSP 1 Score: 244 bits (623), Expect = 4.500e-76
Identity = 133/276 (48.19%), Postives = 180/276 (65.22%), Query Frame = 0
Query:   57 PSNLTVHTTLFTDDSLLSNITTNKQQFVYFPHAALLIVSAAKSGSTSLFQFLYRGSTASSTDHAPPHCASYVQNVESACWRRQAFFLQSYTLPEQRYILTSTSVLRVAVQRNPFERLLSSFKSKFACDTELYNTNKRNRDNLVPKLRRQANLPASSTLCMNISEFATAL----------------SNLQHSNFPLHKLDVHIRPQRLYQQHIRYDIILDIADLSNLSAVQPIINRLPFGALVADGVPHRHVSGSYALLLPERAARKLYRFAAESEM 316
            P +  + + L  DD+LL  IT   + FVY P A +L+ + AK GSTSLFQ ++ G T     ++   C SYV NV S CW  QA +L + +LP +R +LT  + LRVA+QRNP++RLLS+FKSKF C+T LY T+ RNR+++VP LRRQA LP +   CMNISEFA AL                S L+H    L KLD+HIRPQ+ + ++I Y I+LD+ DLSN++ + P++ RLPF  LV+DGV   H S SY LL+PE AA +L+RFA ES++
Sbjct:   23 PGSARLTSPLADDDALLKLITDKNRDFVYIPSADILLATLAKGGSTSLFQCIFAGVTGVPR-YSVKQCGSYVHNVHSPCWNNQATYLYNLSLPHRRKVLTGATTLRVAIQRNPYDRLLSAFKSKFTCNTTLYGTDVRNRESMVPTLRRQAALPLTQPNCMNISEFAEALDRCRQIVTSNRTLPFASKLKH----LRKLDIHIRPQQFFFEYISYHIVLDVDDLSNVTNLTPLLRRLPFVDLVSDGVRQEHASKSYNLLVPELAAGQLHRFALESKV 293          
BLAST of Gchil7728.t1 vs. uniprot
Match: R7QUW9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUW9_CHOCR)

HSP 1 Score: 148 bits (374), Expect = 2.230e-38
Identity = 86/238 (36.13%), Postives = 137/238 (57.56%), Query Frame = 0
Query:   83 FVYFPHAALLIVSAAKSGSTSLFQFLYRGSTASSTDHAPPHC-ASYVQNVESACWRRQAFFLQSYTLPEQRYILTSTSVLRVAVQRNPFERLLSSFKSKFACDTELYNTNKRNRDNLVPKLRRQANLPASSTLCMNISEFATALSNL----QHSNFPLHKLDVHIRPQRLYQQHIRYDIILDIADLSNLSAVQPIINRLPFGALVADGVPHRHVSGSYALLLPERAARKLYRFAAESE 315
            F Y P + + + + +K GST+L+ +L++G +  S+D     C  S V N ++ CW+ +     + T  E+  IL    VLR+A+ RNPFER+LS++KSK AC+++ + T+ R RD L+P + RQA +   ++ C++I+ FA  L  L    +  +F +  LD H RPQ  +   I Y  ILD++ L N++A+QPI+ R+PF  L+ +G      S      L E  A  LY+FA  +E
Sbjct:  110 FAYIPESKIFMTTTSKVGSTTLWTWLHKGLSGKSSDK---ECKGSQVTNFQAPCWQGKVLHPHNMTDLERWKILNDPEVLRIAITRNPFERILSAWKSKAACESDDFGTDVRERDRLIPGMLRQAQMRKGAS-CLSITSFAEVLDKLRRMSERDDFDMTLLDKHFRPQEFHFDIINYQYILDVSMLDNVTALQPIVRRMPFPELLTEGPTKLSSSRPAYQTLSEPTAALLYKFAILTE 343          
BLAST of Gchil7728.t1 vs. uniprot
Match: A0A7S0QSV2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QSV2_9CHLO)

HSP 1 Score: 82.0 bits (201), Expect = 4.230e-14
Identity = 72/247 (29.15%), Postives = 109/247 (44.13%), Query Frame = 0
Query:   85 YFPHAALLIVSAAKSGSTSLFQFLYRGSTASST----DHAPP------HCASYVQNVESACWRRQAFFLQSYTLPEQRYILTSTSVLRVAVQRNPFERLLSSFKSKFACDT------ELY----------NTNKRNRDNLVPKLR---------RQANLPASSTL------CMNISEFATALSNLQHSNFPLHKLDVHIRPQRLYQQHIRYDIILDIADLSNLSAVQPIINRLPFGALVADGVPHRH 290
            Y P A L+I  A K G+TSLF ++YRG          D  PP      +C   VQ+ E  CW+ +        +   ++ L + +  +VA+ R+P++RLLS++KSK ACD       E Y          NT+        P  R         RQ        L      C+++ ++  AL +L  +     +++ H RPQ  +   I YD  L+I  LS+  A++PI   L F A  A  +P  H
Sbjct:   35 YIPEADLVICIAPKGGTTSLFNWIYRGMFGREHGLPGDPDPPGVPWDQNCKFGVQHFEEPCWKGRVIHYNQSGVQANKWRLKNAAT-KVAIFRDPYDRLLSAYKSKIACDDGALIDIEGYARGLLGLAGLNTSALAWTKYGPSCRPGNPCEGGLRQEMTNLYGPLWHYGYPCLSMHDYVRAL-DLIRTKHRAREINAHFRPQDCFFDQIDYDYHLNITGLSSAQALRPIAESLHFSAANAQPIPIMH 279          
The following BLAST results are available for this feature:
BLAST of Gchil7728.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J4L9_9FLOR4.500e-7648.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QUW9_CHOCR2.230e-3836.13Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0QSV2_9CHLO4.230e-1429.15Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005331SulfotransferasePFAMPF03567Sulfotransfer_2coord: 82..260
e-value: 6.9E-8
score: 32.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..322
NoneNo IPR availableTMHMMTMhelixcoord: 31..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:756774..757742 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7728.t1Gchil7728.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025321_pilon 756774..757742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7728.t1 ID=Gchil7728.t1|Name=Gchil7728.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=323bp
MRPPWRDLSPPHAPGRPNREASSNMRPPRSINLSLTILFLLVIVFVFLPF
FLLASPPSNLTVHTTLFTDDSLLSNITTNKQQFVYFPHAALLIVSAAKSG
STSLFQFLYRGSTASSTDHAPPHCASYVQNVESACWRRQAFFLQSYTLPE
QRYILTSTSVLRVAVQRNPFERLLSSFKSKFACDTELYNTNKRNRDNLVP
KLRRQANLPASSTLCMNISEFATALSNLQHSNFPLHKLDVHIRPQRLYQQ
HIRYDIILDIADLSNLSAVQPIINRLPFGALVADGVPHRHVSGSYALLLP
ERAARKLYRFAAESEMAQPRFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005331Sulfotransferase