Gchil7404.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7404.t1
Unique NameGchil7404.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length194
Homology
BLAST of Gchil7404.t1 vs. uniprot
Match: R7QCS3_CHOCR (40S ribosomal protein S9 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QCS3_CHOCR)

HSP 1 Score: 328 bits (840), Expect = 1.120e-112
Identity = 167/178 (93.82%), Postives = 172/178 (96.63%), Query Frame = 0
Query:    1 MTNYRNASKTYRTPRRPYEKERLDSELQLAGKYGLRNKREIWRVQLVLSKIRSAARELLTLEEKDPRRIFEGNALLRRLTRLGLLDESRQALDYVLSLKVQDFLERRLQTQVVKLGLAKSIHHARCLIKQRHIRVGKQLVNVPSFTVRVDSQKHIDFALTSPFGGGRPGRVKRRAIAR 178
            M NYRN SKTYRTPRRP+EKERLDSELQLAGKYGLRNKREIWRVQLVLSKIRSAARELLTL+EKDPRR+FEG ALLRRLTRLGLLDESRQALDYVLSLKVQDFLERRLQTQVVKLGLAKSIHHARCLI+QRHIRVGKQLVNVPSF VRVDSQKHIDF+L SPFGGGRPGRVKRRAI R
Sbjct:    1 MVNYRNTSKTYRTPRRPFEKERLDSELQLAGKYGLRNKREIWRVQLVLSKIRSAARELLTLDEKDPRRVFEGTALLRRLTRLGLLDESRQALDYVLSLKVQDFLERRLQTQVVKLGLAKSIHHARCLIRQRHIRVGKQLVNVPSFMVRVDSQKHIDFSLNSPFGGGRPGRVKRRAIER 178          
BLAST of Gchil7404.t1 vs. uniprot
Match: M2W800_GALSU (40S ribosomal protein S9e n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W800_GALSU)

HSP 1 Score: 296 bits (758), Expect = 3.490e-100
Identity = 148/174 (85.06%), Postives = 163/174 (93.68%), Query Frame = 0
Query:    3 NYRNASKTYRTPRRPYEKERLDSELQLAGKYGLRNKREIWRVQLVLSKIRSAARELLTLEEKDPRRIFEGNALLRRLTRLGLLDESRQALDYVLSLKVQDFLERRLQTQVVKLGLAKSIHHARCLIKQRHIRVGKQLVNVPSFTVRVDSQKHIDFALTSPFGGGRPGRVKRRAI 176
            NYR  SKTYRTPRRP+EKERLD+EL+L G+YGLRNKRE+WRV+  LSKIR+AAR+LLTLEEKDPRRIFEGNALLRRLTR GLLDE+RQ+LD+VLSLKVQD LERRLQTQV+KLGLAKSIHHAR LI+QRHIRVGKQLVNVPSF VRVDSQKHIDF+L SPFGGGRPGRVKRR +
Sbjct:    4 NYRTCSKTYRTPRRPFEKERLDAELKLVGEYGLRNKRELWRVEFALSKIRAAARDLLTLEEKDPRRIFEGNALLRRLTRFGLLDETRQSLDHVLSLKVQDLLERRLQTQVLKLGLAKSIHHARVLIRQRHIRVGKQLVNVPSFMVRVDSQKHIDFSLDSPFGGGRPGRVKRRKL 177          
BLAST of Gchil7404.t1 vs. uniprot
Match: UPI001E1D7E10 (LOW QUALITY PROTEIN: 40S ribosomal protein S9-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D7E10)

HSP 1 Score: 296 bits (759), Expect = 6.010e-100
Identity = 151/177 (85.31%), Postives = 162/177 (91.53%), Query Frame = 0
Query:    1 MTNYRNASKTYRTPRRPYEKERLDSELQLAGKYGLRNKREIWRVQLVLSKIRSAARELLTLEEKDPRRIFEGNALLRRLTRLGLLDESRQALDYVLSLKVQDFLERRLQTQVVKLGLAKSIHHARCLIKQRHIRVGKQLVNVPSFTVRVDSQKHIDFALTSPFGGGRPGRVKRRAIA 177
            M ++R  S T+RTPRRP+EKERLD+ELQL G YG RNKRE+WRVQ VLSKIRSAARELLTLEEKDPRR+F G ALLRRLTRLGLLDE++QALDYVLSLK+QDFLERRLQ QV KLGLAKSIHHAR LIKQRHIRVGKQLVNVPSF VR+DSQKHIDFAL SPFGGGRPGRVKRRAIA
Sbjct:    1 MPDHRKYSTTFRTPRRPFEKERLDNELQLVGMYGXRNKREVWRVQFVLSKIRSAARELLTLEEKDPRRVFXGFALLRRLTRLGLLDETKQALDYVLSLKIQDFLERRLQKQVFKLGLAKSIHHARVLIKQRHIRVGKQLVNVPSFMVRIDSQKHIDFALNSPFGGGRPGRVKRRAIA 177          
BLAST of Gchil7404.t1 vs. uniprot
Match: A0A5J4YNF5_PORPP (40S ribosomal protein S9-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNF5_PORPP)

HSP 1 Score: 290 bits (741), Expect = 1.310e-97
Identity = 146/171 (85.38%), Postives = 159/171 (92.98%), Query Frame = 0
Query:    3 NYRNASKTYRTPRRPYEKERLDSELQLAGKYGLRNKREIWRVQLVLSKIRSAARELLTLEEKDPRRIFEGNALLRRLTRLGLLDESRQALDYVLSLKVQDFLERRLQTQVVKLGLAKSIHHARCLIKQRHIRVGKQLVNVPSFTVRVDSQKHIDFALTSPFGGGRPGRVKR 173
            +YRN SKT RTPRRP+EKERLD ELQ+ GKYGL+NKRE+WRVQ+VLSKIRSAAR+LLTLE +DP+RIFEG ALLRRLTRLGLLDE+ QALDYVLSLKV DFLERRLQTQV KLGLAKSIHHAR LI+QRH+RVGKQLVNVPSF VRVDSQKHIDFAL+SPFGGG PGRVKR
Sbjct:    4 DYRNRSKTSRTPRRPFEKERLDQELQIVGKYGLKNKREVWRVQMVLSKIRSAARDLLTLEPEDPKRIFEGRALLRRLTRLGLLDENNQALDYVLSLKVNDFLERRLQTQVFKLGLAKSIHHARVLIRQRHVRVGKQLVNVPSFLVRVDSQKHIDFALSSPFGGGPPGRVKR 174          
BLAST of Gchil7404.t1 vs. uniprot
Match: A0A7S1TGT7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TGT7_9RHOD)

HSP 1 Score: 287 bits (734), Expect = 1.470e-96
Identity = 145/172 (84.30%), Postives = 159/172 (92.44%), Query Frame = 0
Query:    3 NYRNASKTYRTPRRPYEKERLDSELQLAGKYGLRNKREIWRVQLVLSKIRSAARELLTLEEKDPRRIFEGNALLRRLTRLGLLDESRQALDYVLSLKVQDFLERRLQTQVVKLGLAKSIHHARCLIKQRHIRVGKQLVNVPSFTVRVDSQKHIDFALTSPFGGGRPGRVKRR 174
            +YR  SKT RTPRRP+EKERLD+ELQL GKYGLRNKRE+WRV L LS+IRS+AR LLTLEEK+PRRIFEG+A+LRRLTRLGLLDE RQ+LDYVLSLKVQDFLERRLQTQV +LGLAKSIHHAR LI QRHIRVGKQ+VNVPSF VR DSQKHIDF+L+SPFGGGRPGRVKRR
Sbjct:    4 DYRRYSKTSRTPRRPFEKERLDAELQLVGKYGLRNKREVWRVLLALSRIRSSARSLLTLEEKNPRRIFEGSAMLRRLTRLGLLDEKRQSLDYVLSLKVQDFLERRLQTQVFELGLAKSIHHARVLINQRHIRVGKQMVNVPSFLVRTDSQKHIDFSLSSPFGGGRPGRVKRR 175          
BLAST of Gchil7404.t1 vs. uniprot
Match: A0A1X6NYN7_PORUM (Ribosomal_S4 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYN7_PORUM)

HSP 1 Score: 281 bits (718), Expect = 4.460e-94
Identity = 140/174 (80.46%), Postives = 160/174 (91.95%), Query Frame = 0
Query:    3 NYRNASKTYRTPRRPYEKERLDSELQLAGKYGLRNKREIWRVQLVLSKIRSAARELLTLEEKDPRRIFEGNALLRRLTRLGLLDESRQALDYVLSLKVQDFLERRLQTQVVKLGLAKSIHHARCLIKQRHIRVGKQLVNVPSFTVRVDSQKHIDFALTSPFGGGRPGRVKRRAI 176
            +YRN SKT RTPRRP+EKERLDSEL+  G+YGLRNKRE+WRVQLVLSK+R+ AR LLTL+EKDPRR+FEG ALLRRLTRLG+LDE +QALDYVLSL V++FLERRLQTQV +LGLAKS+HHAR +I QRHIRVGKQLVNVPSF VR+DSQKHIDFAL SP+GGGRPGRV+RRA+
Sbjct:    4 DYRNYSKTSRTPRRPFEKERLDSELETVGQYGLRNKREVWRVQLVLSKMRTTARTLLTLDEKDPRRMFEGAALLRRLTRLGVLDEKKQALDYVLSLNVKEFLERRLQTQVFRLGLAKSMHHARVIIHQRHIRVGKQLVNVPSFLVRMDSQKHIDFALHSPYGGGRPGRVRRRAL 177          
BLAST of Gchil7404.t1 vs. uniprot
Match: E9D4L0_COCPS (40S ribosomal protein S9 n=8 Tax=Onygenales TaxID=33183 RepID=E9D4L0_COCPS)

HSP 1 Score: 278 bits (712), Expect = 3.180e-93
Identity = 137/172 (79.65%), Postives = 157/172 (91.28%), Query Frame = 0
Query:    5 RNASKTYRTPRRPYEKERLDSELQLAGKYGLRNKREIWRVQLVLSKIRSAARELLTLEEKDPRRIFEGNALLRRLTRLGLLDESRQALDYVLSLKVQDFLERRLQTQVVKLGLAKSIHHARCLIKQRHIRVGKQLVNVPSFTVRVDSQKHIDFALTSPFGGGRPGRVKRRAI 176
            R+ SKTY+ PRRPYE  RLDSEL++ G+YGLRNKRE+WRVQL LSKIR AARELLTLEEKDP+R+FEGNAL+RRL R+G+LDESR  LDYVL+LKV+DFLERRLQTQV +LGLAKSIHHAR LI+QRHIRVGKQ+VNVPSF VR+DSQKHIDFALTSP GGGRPGRV+R+ +
Sbjct:    4 RSYSKTYKVPRRPYESARLDSELKMVGEYGLRNKREVWRVQLTLSKIRRAARELLTLEEKDPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKVEDFLERRLQTQVYRLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFIVRLDSQKHIDFALTSPLGGGRPGRVRRKKM 175          
BLAST of Gchil7404.t1 vs. uniprot
Match: A0A7J7IPL0_9RHOD (40S ribosomal protein S9 n=3 Tax=cellular organisms TaxID=131567 RepID=A0A7J7IPL0_9RHOD)

HSP 1 Score: 278 bits (712), Expect = 3.410e-93
Identity = 142/176 (80.68%), Postives = 157/176 (89.20%), Query Frame = 0
Query:    3 NYRNASKTYRTPRRPYEKERLDSELQLAGKYGLRNKREIWRVQLVLSKIRSAARELLTLEEKDPRRIFEGNALLRRLTRLGLLDESRQALDYVLSLKVQDFLERRLQTQVVKLGLAKSIHHARCLIKQRHIRVGKQLVNVPSFTVRVDSQKHIDFALTSPFGGGRPGRVKRRAIAR 178
            +YRN SK Y+TPRRP+EKERLD+EL++ G+YGLRNKRE+WRVQ  LSKIR+AARELLT +EKD RRI EG ALLRRLTR GLLD+++Q L+YVLSLKVQDFLERRLQTQV KLGLAKSIHHAR LI QRHIRVGKQLV VPSF VRVDSQKHIDFA TSPFGGGRPGRVKRR + R
Sbjct:    4 SYRNCSKVYKTPRRPFEKERLDAELKICGEYGLRNKREVWRVQYALSKIRAAARELLTKDEKDERRIVEGAALLRRLTRYGLLDQTQQDLNYVLSLKVQDFLERRLQTQVFKLGLAKSIHHARVLILQRHIRVGKQLVTVPSFMVRVDSQKHIDFAPTSPFGGGRPGRVKRRRLRR 179          
BLAST of Gchil7404.t1 vs. uniprot
Match: A0A7S0Q8A1_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S0Q8A1_9EUKA)

HSP 1 Score: 278 bits (711), Expect = 6.150e-93
Identity = 139/174 (79.89%), Postives = 158/174 (90.80%), Query Frame = 0
Query:    4 YRNASKTYRTPRRPYEKERLDSELQLAGKYGLRNKREIWRVQLVLSKIRSAARELLTLEEKDPRRIFEGNALLRRLTRLGLLDESRQALDYVLSLKVQDFLERRLQTQVVKLGLAKSIHHARCLIKQRHIRVGKQLVNVPSFTVRVDSQKHIDFALTSPFGGGRPGRVKRRAIA 177
            YRN SKT++TPRRP+EKERLD EL+L G+YGLRNKRE+WRVQ  L+KIR AAR LLTL+EKD +R+FEG ALLRRLTRLGLLDE++Q LD+VL LK+QDFLERRLQTQV KLGLAKSIHHAR LI+QRHIRVGKQ+VNVPSF VR+DSQKHIDFALTSPFGGGR GRVKR+ +A
Sbjct:    7 YRNYSKTFKTPRRPFEKERLDQELKLIGEYGLRNKREVWRVQFQLAKIRHAARTLLTLDEKDAKRLFEGAALLRRLTRLGLLDETKQKLDFVLGLKIQDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFMVRIDSQKHIDFALTSPFGGGRFGRVKRKHLA 180          
BLAST of Gchil7404.t1 vs. uniprot
Match: A0A0H2SFL3_9AGAM (40S ribosomal protein S9 n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2SFL3_9AGAM)

HSP 1 Score: 278 bits (710), Expect = 6.880e-93
Identity = 134/170 (78.82%), Postives = 158/170 (92.94%), Query Frame = 0
Query:    5 RNASKTYRTPRRPYEKERLDSELQLAGKYGLRNKREIWRVQLVLSKIRSAARELLTLEEKDPRRIFEGNALLRRLTRLGLLDESRQALDYVLSLKVQDFLERRLQTQVVKLGLAKSIHHARCLIKQRHIRVGKQLVNVPSFTVRVDSQKHIDFALTSPFGGGRPGRVKRR 174
            RN SKTY+ PRRP+E  RLD+E++LAG+YGLRNKREIWR+ LVLSKIR AARELL LEEKDP+R+FEGNAL+RRL R+G+LDE+R+ LDYVL+LK++DFLERRLQTQV KLGLAKSIHHAR L++QRHIRVGKQ+VNVPSF VR+DSQ+HIDFALTSP+GGGRPGRVKR+
Sbjct:    6 RNHSKTYKVPRRPFESARLDAEMKLAGEYGLRNKREIWRISLVLSKIRRAARELLKLEEKDPKRLFEGNALIRRLVRIGVLDETRRRLDYVLALKIEDFLERRLQTQVFKLGLAKSIHHARVLVRQRHIRVGKQIVNVPSFVVRLDSQRHIDFALTSPYGGGRPGRVKRK 175          
The following BLAST results are available for this feature:
BLAST of Gchil7404.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QCS3_CHOCR1.120e-11293.8240S ribosomal protein S9 n=2 Tax=Rhodymeniophycida... [more]
M2W800_GALSU3.490e-10085.0640S ribosomal protein S9e n=1 Tax=Galdieria sulphu... [more]
UPI001E1D7E106.010e-10085.31LOW QUALITY PROTEIN: 40S ribosomal protein S9-like... [more]
A0A5J4YNF5_PORPP1.310e-9785.3840S ribosomal protein S9-1 n=1 Tax=Porphyridium pu... [more]
A0A7S1TGT7_9RHOD1.470e-9684.30Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NYN7_PORUM4.460e-9480.46Ribosomal_S4 domain-containing protein n=1 Tax=Por... [more]
E9D4L0_COCPS3.180e-9379.6540S ribosomal protein S9 n=8 Tax=Onygenales TaxID=... [more]
A0A7J7IPL0_9RHOD3.410e-9380.6840S ribosomal protein S9 n=3 Tax=cellular organism... [more]
A0A7S0Q8A1_9EUKA6.150e-9379.89Hypothetical protein (Fragment) n=2 Tax=Eukaryota ... [more]
A0A0H2SFL3_9AGAM6.880e-9378.8240S ribosomal protein S9 n=1 Tax=Schizopora parado... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 106..170
e-value: 3.5E-4
score: 29.9
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 106..149
e-value: 8.1E-11
score: 41.5
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 106..150
e-value: 3.89328E-7
score: 43.7774
IPR001912Ribosomal protein S4/S9, N-terminalSMARTSM01390Ribosomal_S4_2coord: 5..105
e-value: 1.1E-20
score: 84.7
IPR001912Ribosomal protein S4/S9, N-terminalPFAMPF00163Ribosomal_S4coord: 12..61
e-value: 8.9E-6
score: 26.5
IPR005710Ribosomal protein S4/S9, eukaryotic/archaealTIGRFAMTIGR01018TIGR01018coord: 1..163
e-value: 1.6E-66
score: 221.2
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 105..160
e-value: 1.4E-12
score: 49.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..193
NoneNo IPR availablePANTHERPTHR11831:SF540S RIBOSOMAL PROTEIN S9coord: 9..192
NoneNo IPR availablePROSITEPS50889S4coord: 106..180
score: 10.484679
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 9..157
IPR022801Ribosomal protein S4/S9PANTHERPTHR1183130S 40S RIBOSOMAL PROTEINcoord: 9..192
IPR018079Ribosomal protein S4, conserved sitePROSITEPS00632RIBOSOMAL_S4coord: 104..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:948492..949207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7404.t1Gchil7404.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 948492..949207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7404.t1 ID=Gchil7404.t1|Name=Gchil7404.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=194bp
MTNYRNASKTYRTPRRPYEKERLDSELQLAGKYGLRNKREIWRVQLVLSK
IRSAARELLTLEEKDPRRIFEGNALLRRLTRLGLLDESRQALDYVLSLKV
QDFLERRLQTQVVKLGLAKSIHHARCLIKQRHIRVGKQLVNVPSFTVRVD
SQKHIDFALTSPFGGGRPGRVKRRAIARRKSSGGGGGEDEDDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR001912Ribosomal_S4/S9_N
IPR005710Ribosomal_S4/S9_euk/arc
IPR036986S4_RNA-bd_sf
IPR022801Ribosomal_S4/S9
IPR018079Ribosomal_S4_CS