Gchil7303.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7303.t1
Unique NameGchil7303.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length258
Homology
BLAST of Gchil7303.t1 vs. uniprot
Match: A0A2V3J3S3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3S3_9FLOR)

HSP 1 Score: 395 bits (1016), Expect = 2.280e-137
Identity = 184/259 (71.04%), Postives = 223/259 (86.10%), Query Frame = 0
Query:    1 MWSSNQTGRASALVCALPN--FPPSSRLVAARVDTDHSTGKGKFALTGCYASKNDSFGIDATYAVDDANTVYATYGVTDEKLLSLGVETGFTAFSRRGTVDLTYSPPRDAAVLKTAVRQGMFKVSAFFSFDNFKKDYVKSHSERYEVEAKISSTENLKIAFDGKSRAARIKLSHKLDSKNKLDAEYQHLAAGSKAVVFTLKHVYSKAHTFSLGFNYGANKCKAEWDCRTDNGPWTITTNFPFDASPLSGDLSIKRRFDF 257
            MW  NQT + + ++CALPN  F  + RLVAAR+DTDH TGKGK A+TG Y SK D+FGIDA YA+DDA+T+YA+YGVT+EKL++LG+E+GFTAF +R T DLTY+PP+D+A LK AVRQG  K++  FSFD+ KKD VK+HSERYEV+AKIS +E+LK++FDGKSRAA++KLS KLD KNKLDAEY H++AGSKAVV TLKH Y+KAHTFSLGFNYG  KCK EWDC+T+NGPWT+TTNFPF+ASPLSGDLSIKRRFDF
Sbjct:    1 MWPWNQTTQLNPVICALPNPSFKGAGRLVAARIDTDHPTGKGKVAITGRYTSKKDAFGIDAAYAIDDAHTIYASYGVTEEKLVALGIESGFTAFGKRSTFDLTYNPPKDSATLKAAVRQGKLKLTGIFSFDSLKKDTVKNHSERYEVDAKISGSESLKMSFDGKSRAAKVKLSRKLDPKNKLDAEYHHISAGSKAVVLTLKHAYNKAHTFSLGFNYGGKKCKVEWDCKTENGPWTVTTNFPFNASPLSGDLSIKRRFDF 259          
BLAST of Gchil7303.t1 vs. uniprot
Match: R7QSY7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSY7_CHOCR)

HSP 1 Score: 296 bits (758), Expect = 3.710e-98
Identity = 138/236 (58.47%), Postives = 180/236 (76.27%), Query Frame = 0
Query:   22 PSSRLVAARVDTDHSTGKGKFALTGCYASKNDSFGIDATYAVDDANTVYATYGVTDEKLLSLGVETGFTAFSRRGTVDLTYSPPRDAAVLKTAVRQGMFKVSAFFSFDNFKKDYVKSHSERYEVEAKISSTENLKIAFDGKSRAARIKLSHKLDSKNKLDAEYQHLAAGSKAVVFTLKHVYSKAHTFSLGFNYGANKCKAEWDCRTDNGPWTITTNFPFDASPLSGDLSIKRRFDF 257
            P   LVAAR DTDH+TG G+ A+TG Y S+ DSF +DA YA+DD NT YATYGVTDEKL+ LG+ETGFTA+ RR T+D+TY+PP+D+A +K AVRQG  K++A  +F N +   +  HSERYE++AK+S  E+LK++FDGKS+A+++K+S KLD KNKL+A Y +    S++   T KH YSK HT S+  +YG  K KAEWDC+TDNGPWT+TT FPF+ASP  G+  IKRRF+F
Sbjct:   22 PLPFLVAARADTDHTTGPGQVAITGRYDSRKDSFAVDAAYAIDDNNTAYATYGVTDEKLVDLGLETGFTAYGRRNTLDMTYNPPKDSASIKLAVRQGKTKITAASTFYNIQSSKLSDHSERYELDAKLSGVESLKMSFDGKSKASKVKVSRKLDPKNKLEAVYNYKDHTSRSASLTFKHQYSKIHTLSIATDYGDRKFKAEWDCKTDNGPWTVTTAFPFNASPHKGEWKIKRRFEF 257          
BLAST of Gchil7303.t1 vs. uniprot
Match: M2Y5X7_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5X7_GALSU)

HSP 1 Score: 132 bits (333), Expect = 3.510e-34
Identity = 71/233 (30.47%), Postives = 128/233 (54.94%), Query Frame = 0
Query:   26 LVAARVDTDHSTGKGKFALTGCYASKNDSFGIDATYAVDDANTVYATYGVTDEKLLSLGVETGFTAFSRRGTVDLTYSPPRDAAVLKTAVR-QGMFKVSAFFSFDNFKKDYVKSHSERYEVEAKISSTENLKIAFDGKSRAARIKLSHKLDSKNKLDAEYQHLAAGSKAVVFTLKHVYSKAHTFSLGFNYGANKCKAEWDCRTDNGPWTITTNFPFDASPLSGDLSIKRRFDF 257
            L  A   TDH+TG+GK A+T  +     +  ++ TY  + A   YA+Y      +   G+E  FT+F +R  +D ++ P RD   LK ++      +++ +F F    K   + +S+R E+ ++++S  +++I +D + +A + K+SHKLD KN ++ EY +L+   ++     K V + A+  ++  ++G+ K   EW  +T +GPWT+  +  FD      +LSIKRR +F
Sbjct:   10 LAYAHYATDHTTGRGKAAVTVHFEPHKPALDLEFTYGPNRATRAYASYSAEHSHVKHFGIEHSFTSFGKRQLLDFSWLPQRDMCNLKYSLNIDKRNQLTGYFGFRQVSKKSWERNSDRLELFSRLASNNSIRIQYDVQMKATKAKISHKLDMKNVIEGEYSYLSKYRQSGSIGWKRVINTANNLNMIADWGSRKYTFEWTNKTADGPWTMKAHTSFDKPFHQIELSIKRRLEF 242          
The following BLAST results are available for this feature:
BLAST of Gchil7303.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J3S3_9FLOR2.280e-13771.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QSY7_CHOCR3.710e-9858.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2Y5X7_GALSU3.510e-3430.47Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:1001072..1002075 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7303.t1Gchil7303.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 1001072..1002075 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7303.t1 ID=Gchil7303.t1|Name=Gchil7303.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=258bp
MWSSNQTGRASALVCALPNFPPSSRLVAARVDTDHSTGKGKFALTGCYAS
KNDSFGIDATYAVDDANTVYATYGVTDEKLLSLGVETGFTAFSRRGTVDL
TYSPPRDAAVLKTAVRQGMFKVSAFFSFDNFKKDYVKSHSERYEVEAKIS
STENLKIAFDGKSRAARIKLSHKLDSKNKLDAEYQHLAAGSKAVVFTLKH
VYSKAHTFSLGFNYGANKCKAEWDCRTDNGPWTITTNFPFDASPLSGDLS
IKRRFDF*
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