Gchil7302.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7302.t1
Unique NameGchil7302.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length242
Homology
BLAST of Gchil7302.t1 vs. uniprot
Match: A0A2V3J3N1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3N1_9FLOR)

HSP 1 Score: 344 bits (882), Expect = 1.800e-117
Identity = 161/236 (68.22%), Postives = 195/236 (82.63%), Query Frame = 0
Query:    1 MTNIRADPSCARIGLVFGLVLAGMIPPPPALLSFYSRFCILLQEGLKYAGVPSSSYFIYEPEMLHTTVATFRSFLRPPPPNPELFVSEWKGLLMRASRRSGWPVAGTYVLTLYEAKVQDNGVGTFLYVDKLRVIERMRECIRAEMREKLSQTSLRYIECINGDIKIPNIVHSTMLRWRGSPSISRSQLQNVFSEAFVLTKAVEYPVDIPLSSVSLLREWKPYMMKKTCVAQLWPPE 236
            M  I+ DPSCA IGLVFGLVL GM PPP ++LSFY +F  LLQEGL+ AGV  S+ ++Y+ +MLHTT+ATFRSF++PPP +PEL+VSEWKG+L+RASRR+ WP  GTYVL+L EAKVQDNGVGT L+ DKLRVIERMRECIR EM E  S+ SL YI C N DI+IPNI+HST+LRWR +P++S  +LQN+FSEAF+LTKA  Y  ++PL++VSLLREWKPYM  KTCVAQLW PE
Sbjct:    1 MNYIQPDPSCANIGLVFGLVLCGMSPPPMSMLSFYKKFSALLQEGLRNAGVHESACYLYDADMLHTTLATFRSFIKPPPRSPELYVSEWKGILLRASRRAEWPAPGTYVLSLQEAKVQDNGVGTLLFTDKLRVIERMRECIREEMSEARSKDSLYYIRCTNADIRIPNIIHSTVLRWRKAPNLSVFELQNIFSEAFILTKAAGYSTEMPLTTVSLLREWKPYMRAKTCVAQLWLPE 236          
BLAST of Gchil7302.t1 vs. uniprot
Match: A0A7S4VQQ7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VQQ7_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 8.560e-10
Identity = 62/238 (26.05%), Postives = 104/238 (43.70%), Query Frame = 0
Query:   14 GLVFGLVLAGMIPPPPALL-----SFYS--RFCILLQEGLKYA-----------GVPSSSYFIYEPEMLHTTVATFRSFLRPPPPNPE--LFVSEWKGLLMRASRRSGWPVA----GTYVLTLYEAKVQDNGVGTFLYVDKLRVIERMRECIRAEMREKLSQTSLRYIECINGDIKIPNIVHSTMLRWRGSPSISRSQLQNVFSEAFV--LTKAVEYPVDIPLSS--VSLLREWKPYM 223
            G  FGL+   + PPP  +L     +F S  R C   Q+ L              G  +++ ++Y PE LH T++TF  F +      +  + + +W+ +L+ AS+R  WP +          +  A++     G  L+ +    +  MR CI  E   ++   SL  +      + IPNIVHST LR+   P      +Q  FS   +  L     +  D+ + +  + ++ EW PYM
Sbjct:   67 GSEFGLLAVTLWPPPLDILREPYNTFLSCVRDCFDKQDILAQPHDVAKDSSSGIGPAAAAVYMYPPECLHVTISTFHPFTKRTTDKSKQAVLMEQWRDILIHASQRPEWPSSRNNKNKLKFRICGAQIGQKA-GILLWEELTGALHDMRNCISRETASRVD--SLAKVGIDANTLMIPNIVHSTFLRFHHVPISKCEGVQAKFSNLVLPHLFSDDMFGSDLVVETDQIRMVCEWTPYM 301          
BLAST of Gchil7302.t1 vs. uniprot
Match: A0A0M0J9H0_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J9H0_9EUKA)

HSP 1 Score: 60.5 bits (145), Expect = 2.470e-7
Identity = 65/241 (26.97%), Postives = 99/241 (41.08%), Query Frame = 0
Query:    6 ADPSCARIGL--------VFGLVLAGMIPPPPALLSFYSRFCILLQEGLKYAGVPSSSYFIYEPEMLHTTVATFRSFLRPPPPNP--ELFVSEWKGLLMRASRRSGWPVAGTYVLTLYEAKVQDNGVGTFLYVDKLRVIERMRECIRAEM-----------REKLSQTSLRYIECINGDIK--IPNIVHSTMLRWRGSPSISRSQLQNVFSEAFVLTKAVEYPVDIPLSSVSLLREWKPYM 223
            A+P+ AR+          V GLVL    P P  + S     C    E L+ A +P+++Y +Y P  LH T+AT R+F      +   E  V+ W+ +L +A     WP     V    EA   +   G   Y D    I  MR  +R  +            ++   T L       G++   IP+IVHST++RW   P    +      +EAF        P+++ +     + E  PYM
Sbjct:    5 ANPTVARLAAGDRFDGENVCGLVLVCAWPMPSDVQSQAGSLC----EKLR-AELPAAAY-VYPPSTLHCTIATLRAFTHGAMDSSAVEACVALWEPVLAKAKASPTWPTQP--VRLRMEAPTLEGAAGILRYADLDGAIAAMRAALRDAIVAAGGVAVEGGGDRSLGTPLNGAP--EGEVPPHIPDIVHSTLVRWTAEPDDRAAA-----AEAFARVAQSWTPLELTVPRAIAVFERLPYM 230          
BLAST of Gchil7302.t1 vs. uniprot
Match: A0A1Q9ETY8_SYMMI (Fibronectin type-III domain-containing protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9ETY8_SYMMI)

HSP 1 Score: 59.7 bits (143), Expect = 1.040e-6
Identity = 66/225 (29.33%), Postives = 93/225 (41.33%), Query Frame = 0
Query:   16 VFGLVLAGMIPPPPALLSFYSRFCILLQEGLKYAGVPSSSYFIYEPEMLHTTVATFRSFL--RPPPPNPELFVSEWKGLLMRASRRSGWPVAGTYVLTLYEAKVQDNGVGTFLYVDKLRVIERMRECIRAEM-------------REKLSQTSLRYIECINGDIK--IPNIVHSTMLRWRGSPSISRSQLQNVFSEAFVLTKAVEYPVDIPLSSVSLLREWKPYM 223
            + GLV+    P P  +L  Y  F    +E L  A +P  +Y +Y    LH T+ T R+F   R      +     W  +L  A R  GWP  G   L +    ++ +  G F Y D    I  MR+ +RA +             R K    S        G+    IP+IVHST+LRW   P+  R+  Q    EAF        PV+I  ++   + E  PYM
Sbjct:  324 ICGLVVVCSWPMPQPVLEQYELF----REKLA-AAMPKEAY-VYPGTTLHCTICTLRAFTSGRMESSEKQRSSESWSKILDAARRDPGWPT-GPVALKMGRPTLEGSA-GIFRYEDTAGTIAAMRKALRAAIIAAGGEPAEGGGDRSKAKPPS----GTPEGEPAPHIPDIVHSTVLRWTAEPA-DRAAAQ----EAFAQVAESWEPVEIIATAPRAVFEDIPYM 531          
The following BLAST results are available for this feature:
BLAST of Gchil7302.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J3N1_9FLOR1.800e-11768.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S4VQQ7_9STRA8.560e-1026.05Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A0M0J9H0_9EUKA2.470e-726.97Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A1Q9ETY8_SYMMI1.040e-629.33Fibronectin type-III domain-containing protein n=3... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..241
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:1000297..1001022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7302.t1Gchil7302.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 1000297..1001022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7302.t1 ID=Gchil7302.t1|Name=Gchil7302.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=242bp
MTNIRADPSCARIGLVFGLVLAGMIPPPPALLSFYSRFCILLQEGLKYAG
VPSSSYFIYEPEMLHTTVATFRSFLRPPPPNPELFVSEWKGLLMRASRRS
GWPVAGTYVLTLYEAKVQDNGVGTFLYVDKLRVIERMRECIRAEMREKLS
QTSLRYIECINGDIKIPNIVHSTMLRWRGSPSISRSQLQNVFSEAFVLTK
AVEYPVDIPLSSVSLLREWKPYMMKKTCVAQLWPPENKDTN*
back to top