Gchil7287.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7287.t1
Unique NameGchil7287.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length327
Homology
BLAST of Gchil7287.t1 vs. uniprot
Match: A0A2V3J4V8_9FLOR (50S ribosomal protein L21 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4V8_9FLOR)

HSP 1 Score: 329 bits (844), Expect = 1.340e-109
Identity = 158/219 (72.15%), Postives = 185/219 (84.47%), Query Frame = 0
Query:  108 RQICSSVHVSNEYHADDQESIPIESSVQIERVPLPPGLSNDKFGLFEVLESSQDLRHVKGRNAVVGIHGPTELWLPKGIEGHGASGGIWAAIATSGTQYKVMKGDVLYTNRYAGEVNTQIAFDSVLAIGAFDWTLFGRPAIRHAKVLATIEEQTKSAKVMVTKFKKRKGYLKRKGHRQPITRFRIDQIVYEWPDAEMIRPYDVPFHPNRPPLPNHRRPL 326
            R   S+    N YH D+ +S  +E  ++IERVPLPPGL +DKFGL+EVL++S+D+R  KG NAVV IHGP E+WLP+GIE HGASGG+WA I TSGTQYKVMKGDVLYTNR AGEVNTQ+AFD VLAIGAFDWTLFGRP IR AKVLAT+EEQTKSAKVMV KFKKRKGYL+RKGHRQPITRFRID+IVY+WP A+MI+P++V + P  PP+P+H RPL
Sbjct:   74 RGFASASDAQNTYHGDESDST-VEKPIEIERVPLPPGLKSDKFGLYEVLDTSKDMRETKGENAVVAIHGPPEIWLPRGIEEHGASGGLWAVIGTSGTQYKVMKGDVLYTNRQAGEVNTQVAFDWVLAIGAFDWTLFGRPLIRGAKVLATVEEQTKSAKVMVAKFKKRKGYLRRKGHRQPITRFRIDEIVYQWPAADMIKPHEVKYDPEGPPMPHHIRPL 291          
BLAST of Gchil7287.t1 vs. uniprot
Match: A0A7J7IDF1_9RHOD (Ribosomal protein l21 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDF1_9RHOD)

HSP 1 Score: 103 bits (258), Expect = 9.830e-23
Identity = 53/122 (43.44%), Postives = 80/122 (65.57%), Query Frame = 0
Query:  186 IEGHGASGGIWAAIATSGTQYKVMKGDVLYTNRYAGEVNTQIAFDSVLAIGAFDWTLFGRPAIRHAKVLATIEEQTKSAKVMVTKFKKRKGYLKRKGHRQPITRFRIDQIVYEWPDAEMIRP 307
            ++G G+  G +A IA    QYKV  GD++Y +R  GEV+ ++ F  VLA+G+ DW++ GRP +  A+ +ATIEEQ+ S K+ + K K+RKGY +  GHRQP TR  I +I ++ P+   + P
Sbjct:   99 VDGRGS--GWFAVIARGPKQYKVTVGDIVYLDRLEGEVSHEVRFPEVLALGSVDWSVIGRPYVPGAEAVATIEEQSLSQKIYIYKKKRRKGYERLLGHRQPYTRVHITEIRWQVPEDNELEP 218          
BLAST of Gchil7287.t1 vs. uniprot
Match: U2E7I3_9FIRM (50S ribosomal protein L21 n=2 Tax=Eubacteriales TaxID=186802 RepID=U2E7I3_9FIRM)

HSP 1 Score: 93.6 bits (231), Expect = 3.300e-20
Identity = 43/101 (42.57%), Postives = 70/101 (69.31%), Query Frame = 0
Query:  195 IWAAIATSGTQYKVMKGDVLYTNRYAGEVNTQIAFDSVLAIGAFDWTLFGRPAIRHAKVLATIEEQTKSAKVMVTKFKKRKGYLKRKGHRQPITRFRIDQI 295
            ++A IAT G QYKV +GDV+Y  + AGEV+  +   +VLA+G  D  + G+P +  A V+A +  Q K+ K++V K+K++K Y +++GHRQP T+ +I++I
Sbjct:    1 MYAVIATGGKQYKVQEGDVIYVEKLAGEVDATVELTNVLAVGKEDGLVVGKPVVEGANVVAKVLGQGKAKKIIVFKYKRKKDYRRKQGHRQPYTKLQIEKI 101          
BLAST of Gchil7287.t1 vs. uniprot
Match: RL21_CLOAB (50S ribosomal protein L21 n=4 Tax=Clostridium TaxID=1485 RepID=RL21_CLOAB)

HSP 1 Score: 91.3 bits (225), Expect = 2.420e-19
Identity = 43/101 (42.57%), Postives = 68/101 (67.33%), Query Frame = 0
Query:  195 IWAAIATSGTQYKVMKGDVLYTNRYAGEVNTQIAFDSVLAIGAFDWTLFGRPAIRHAKVLATIEEQTKSAKVMVTKFKKRKGYLKRKGHRQPITRFRIDQI 295
            ++A IAT G QYKV +GD +Y  + A EV++ I  + VLA+   D  + G+P +  AKV+A +E Q KS K++V K+K++K Y +++GHRQ  T+  I++I
Sbjct:    1 MYAVIATGGKQYKVQEGDAIYVEKIAAEVDSTIELNEVLAVSKEDGLVLGKPVVEGAKVVAKVEAQGKSKKIIVFKYKRKKDYRRKRGHRQAYTKLVIEKI 101          
BLAST of Gchil7287.t1 vs. uniprot
Match: A0A084JI46_9CLOT (50S ribosomal protein L21 n=11 Tax=root TaxID=1 RepID=A0A084JI46_9CLOT)

HSP 1 Score: 91.3 bits (225), Expect = 2.420e-19
Identity = 43/101 (42.57%), Postives = 68/101 (67.33%), Query Frame = 0
Query:  195 IWAAIATSGTQYKVMKGDVLYTNRYAGEVNTQIAFDSVLAIGAFDWTLFGRPAIRHAKVLATIEEQTKSAKVMVTKFKKRKGYLKRKGHRQPITRFRIDQI 295
            ++A + T G QY+V +GDVL+  +   EV++ + FD VLA+G  D  + G+P +  AKV+A +  Q K+ KV+V K+K +K Y K++GHRQP T+  I++I
Sbjct:    1 MYAVLLTGGKQYRVQEGDVLFVEKLEAEVDSTVEFDKVLAVGKEDGLVVGKPVVEGAKVVAKVVAQGKAKKVIVFKYKPKKDYRKKQGHRQPFTKVVIEKI 101          
BLAST of Gchil7287.t1 vs. uniprot
Match: A0A2K9E9D4_9FIRM (50S ribosomal protein L21 n=3 Tax=Eubacteriales TaxID=186802 RepID=A0A2K9E9D4_9FIRM)

HSP 1 Score: 90.5 bits (223), Expect = 4.710e-19
Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = 0
Query:  195 IWAAIATSGTQYKVMKGDVLYTNRYAGEVNTQIAFDSVLAIGAFDWTLFGRPAIRHAKVLATIEEQTKSAKVMVTKFKKRKGYLKRKGHRQPITRFRIDQI 295
            ++A I   G QYKV +GDV++ +R AGE  T + FD VLA+   D   FG P +++A V   I    K  K++V KFK +KGY K++GHRQP T+ +I++I
Sbjct:    1 MYAIIENGGKQYKVQEGDVVFLDRLAGEEGTSVTFDKVLAVSDGDKMNFGAPFVKNATVTGQILSHGKDKKIIVFKFKAKKGYRKKQGHRQPHTKVKIEKI 101          
BLAST of Gchil7287.t1 vs. uniprot
Match: A0A6M0R637_9CLOT (50S ribosomal protein L21 n=1 Tax=Clostridium niameyense TaxID=1622073 RepID=A0A6M0R637_9CLOT)

HSP 1 Score: 90.1 bits (222), Expect = 6.750e-19
Identity = 47/102 (46.08%), Postives = 69/102 (67.65%), Query Frame = 0
Query:  195 IWAAIATSGTQYKVMKGDVLYTNRYAGEVNTQIAFDSVLAIGAFDW-TLFGRPAIRHAKVLATIEEQTKSAKVMVTKFKKRKGYLKRKGHRQPITRFRIDQI 295
            ++A I T G QYKV +GDVLY  +   EV++ I FD VL +G  +  T+ G+PA+  AKV A +  Q K+ KV+V K+K +K Y K++GHRQP T+ +I++I
Sbjct:    1 MYAVITTGGKQYKVAEGDVLYVEKLTAEVDSTIDFDQVLLLGKENGETVVGKPAVEGAKVTAKVLAQGKAKKVVVFKYKPKKHYRKKQGHRQPYTKIQIEKI 102          
BLAST of Gchil7287.t1 vs. uniprot
Match: A0A3A4T663_9DELT (50S ribosomal protein L21 n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4T663_9DELT)

HSP 1 Score: 89.7 bits (221), Expect = 9.400e-19
Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 0
Query:  195 IWAAIATSGTQYKVMKGDVLYTNRYAGEVNTQIAFDSVLAIGAFDWTLFGRPAIRHAKVLATIEEQTKSAKVMVTKFKKRKGYLKRKGHRQPITRFRIDQIV 296
            ++A +A  G QYKV +GDVL   +  G+V   + FD VL +   +    G+P + +  V A I EQ K+ K++V KFK+RKGY K +GHRQP T  +ID IV
Sbjct:    1 MYAVVAAGGKQYKVEEGDVLRIEKVDGDVGDTVTFDKVLLVADGEQLTIGQPLVENTSVSAKIVEQGKNKKIIVFKFKRRKGYRKTQGHRQPFTAVKIDSIV 102          
BLAST of Gchil7287.t1 vs. uniprot
Match: A0A7W0HJA4_9DELT (50S ribosomal protein L21 n=1 Tax=Desulfosalsimonas propionicica TaxID=332175 RepID=A0A7W0HJA4_9DELT)

HSP 1 Score: 89.7 bits (221), Expect = 9.660e-19
Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 0
Query:  195 IWAAIATSGTQYKVMKGDVLYTNRYAGEVNTQIAFDSVLAIGAFDWTLFGRPAIRHAKVLATIEEQTKSAKVMVTKFKKRKGYLKRKGHRQPITRFRIDQI 295
            ++A +AT G QYKV KGDVL   + AG+V   + FD +L +   D    G+P + +A V A I EQ +S K++V K+K+RK Y  +KGHRQ  T  +ID I
Sbjct:    1 MYAVVATGGKQYKVTKGDVLRIEKIAGDVGDSVTFDKILMLSDGDAVSLGQPVLENASVQARIVEQARSKKILVFKYKRRKRYRLKKGHRQSYTAVQIDDI 101          
BLAST of Gchil7287.t1 vs. uniprot
Match: A0A1M6JJE9_9CLOT (50S ribosomal protein L21 n=1 Tax=Hathewaya proteolytica DSM 3090 TaxID=1121331 RepID=A0A1M6JJE9_9CLOT)

HSP 1 Score: 89.4 bits (220), Expect = 1.270e-18
Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = 0
Query:  195 IWAAIATSGTQYKVMKGDVLYTNRYAGEVNTQIAFDSVLAIGAFDWTLFGRPAIRHAKVLATIEEQTKSAKVMVTKFKKRKGYLKRKGHRQPITRFRIDQI 295
            ++A IAT G QYKV +GDV++  +   EV T +  + VLA+G  D  + G+P +  AKV+A + EQ K+ KV+V K+K +K + K+ GHRQ  T+ +I++I
Sbjct:    1 MYAIIATGGKQYKVQEGDVIFVEKLNAEVETSVELNEVLAVGKEDGLVLGKPVVEGAKVVAKVLEQGKAKKVIVFKYKPKKDFRKKNGHRQMYTKLQIEKI 101          
The following BLAST results are available for this feature:
BLAST of Gchil7287.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4V8_9FLOR1.340e-10972.1550S ribosomal protein L21 n=1 Tax=Gracilariopsis c... [more]
A0A7J7IDF1_9RHOD9.830e-2343.44Ribosomal protein l21 n=1 Tax=Cyanidiococcus yangm... [more]
U2E7I3_9FIRM3.300e-2042.5750S ribosomal protein L21 n=2 Tax=Eubacteriales Ta... [more]
RL21_CLOAB2.420e-1942.5750S ribosomal protein L21 n=4 Tax=Clostridium TaxI... [more]
A0A084JI46_9CLOT2.420e-1942.5750S ribosomal protein L21 n=11 Tax=root TaxID=1 Re... [more]
A0A2K9E9D4_9FIRM4.710e-1944.5550S ribosomal protein L21 n=3 Tax=Eubacteriales Ta... [more]
A0A6M0R637_9CLOT6.750e-1946.0850S ribosomal protein L21 n=1 Tax=Clostridium niam... [more]
A0A3A4T663_9DELT9.400e-1944.1250S ribosomal protein L21 n=1 Tax=Desulfobacterace... [more]
A0A7W0HJA4_9DELT9.660e-1944.5550S ribosomal protein L21 n=1 Tax=Desulfosalsimona... [more]
A0A1M6JJE9_9CLOT1.270e-1842.5750S ribosomal protein L21 n=1 Tax=Hathewaya proteo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001787Ribosomal protein L21TIGRFAMTIGR00061TIGR00061coord: 197..296
e-value: 1.6E-22
score: 77.8
IPR001787Ribosomal protein L21HAMAPMF_01363Ribosomal_L21coord: 195..297
score: 20.477013
IPR028909Ribosomal protein L21-likePFAMPF00829Ribosomal_L21pcoord: 197..295
e-value: 1.7E-28
score: 98.8
IPR028909Ribosomal protein L21-likePANTHERPTHR2134950S RIBOSOMAL PROTEIN L21coord: 194..296
IPR018258Ribosomal protein L21, conserved sitePROSITEPS01169RIBOSOMAL_L21coord: 266..288
IPR036164L21-like superfamilySUPERFAMILY141091L21p-likecoord: 196..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:962128..963108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7287.t1Gchil7287.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 962128..963108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7287.t1 ID=Gchil7287.t1|Name=Gchil7287.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=327bp
MSSSTTMPKGSETHLPPASRRATRLEALFRSFETRLISVCKRNQVAYHFH
ATQMLRTAWRSLFSSAITNNRKVLWSTPSTTPPFSQIHTTSFLAQLSPLY
STFGGRGRQICSSVHVSNEYHADDQESIPIESSVQIERVPLPPGLSNDKF
GLFEVLESSQDLRHVKGRNAVVGIHGPTELWLPKGIEGHGASGGIWAAIA
TSGTQYKVMKGDVLYTNRYAGEVNTQIAFDSVLAIGAFDWTLFGRPAIRH
AKVLATIEEQTKSAKVMVTKFKKRKGYLKRKGHRQPITRFRIDQIVYEWP
DAEMIRPYDVPFHPNRPPLPNHRRPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001787Ribosomal_L21
IPR028909L21p-like
IPR018258Ribosomal_L21_CS
IPR036164L21-like_sf