Gchil7266.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7266.t1
Unique NameGchil7266.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length150
Homology
BLAST of Gchil7266.t1 vs. uniprot
Match: A0A2V3IXI8_9FLOR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXI8_9FLOR)

HSP 1 Score: 263 bits (672), Expect = 2.140e-88
Identity = 118/143 (82.52%), Postives = 135/143 (94.41%), Query Frame = 0
Query:    6 RLAPRNTRMMSSNPDHSVNVLSGIPEKHAARRVRIYKPAKVATQQGRGSLTQMWKMSFEKLEGDDRWTNPLMGWTSTGDPLSNMGMSFPSKEAAIHYAERNGYEFVTAEPAEEKQHVKPIAPFKRSMVHHWRHSGTPVYDGDS 148
            RLAPR TR+MS+N DH++NVLSGIP+KHAARRVRI++PAKVATQQGRGS+TQMWKM+FEK+EGDDRWTNPLMGWTSTGDPLSNMGM+FP+KEAAI YAERNGY F   EPA+EK H+KPIAPFKR+MVHHWRHSGTPVY+GD+
Sbjct:   12 RLAPRATRLMSTNSDHTINVLSGIPDKHAARRVRIFRPAKVATQQGRGSITQMWKMTFEKIEGDDRWTNPLMGWTSTGDPLSNMGMAFPTKEAAIQYAERNGYGFTVVEPAQEKPHLKPIAPFKRAMVHHWRHSGTPVYEGDT 154          
BLAST of Gchil7266.t1 vs. uniprot
Match: R7QMJ9_CHOCR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMJ9_CHOCR)

HSP 1 Score: 233 bits (593), Expect = 2.260e-76
Identity = 109/142 (76.76%), Postives = 124/142 (87.32%), Query Frame = 0
Query:    6 RLAPRNTRMMSSNPDHSVNVLSGIPEKHAARRVRIYKPAKVATQQGRGSLTQMWKMSFEKLEGDDRWTNPLMGWTSTGDPLSNMGMSFPSKEAAIHYAERNGYEFVTAEPAEEKQHVKPIAPFKRSMVHHWRHSGTPVYDGD 147
            RLAP  +R +SS+ D SVNVLSGIP+KHAARRVRI++PAKVATQQGRG LTQMW++ FEK+EGDDRWTNPLMGWTSTGDPLSNMGM FP+KEAA+ YAERNGYE+   EP EEKQ V+ IAPFKR+MVHHWRH   PVY+GD
Sbjct:   12 RLAPMASRQLSSSRDASVNVLSGIPDKHAARRVRIHRPAKVATQQGRGGLTQMWRLQFEKIEGDDRWTNPLMGWTSTGDPLSNMGMPFPTKEAAMKYAERNGYEYKVIEPEEEKQQVRKIAPFKRAMVHHWRHEA-PVYEGD 152          
BLAST of Gchil7266.t1 vs. uniprot
Match: M2Y480_GALSU (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y480_GALSU)

HSP 1 Score: 163 bits (413), Expect = 1.210e-48
Identity = 71/126 (56.35%), Postives = 92/126 (73.02%), Query Frame = 0
Query:   22 SVNVLSGIPEKHAARRVRIYKPAKVATQQGRGSLTQMWKMSFEKLEGDDRWTNPLMGWTSTGDPLSNMGMSFPSKEAAIHYAERNGYEFVTAEPAEEKQHVKPIAPFKRSMVHHWRHSGTPVYDGD 147
            S+ V+SG+PEKH  RRV+IYKP + ATQQGRGS   +WK+ FEKLE  DRWTNPLMGWTSTGDPLS   + FP +E+AI YA R G  ++  EP EE++H++    + +SMVH W H+G P Y+ +
Sbjct:   54 SLGVISGVPEKHLKRRVKIYKPPRTATQQGRGSKYAVWKLEFEKLEEGDRWTNPLMGWTSTGDPLSQTAVYFPDRESAIEYARRYGLSYIIYEPEEEEEHIRSFNAYGKSMVHQWNHNGIPKYEDE 179          
BLAST of Gchil7266.t1 vs. uniprot
Match: M1VJG6_CYAM1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=2 Tax=cellular organisms TaxID=131567 RepID=M1VJG6_CYAM1)

HSP 1 Score: 162 bits (409), Expect = 4.750e-48
Identity = 73/119 (61.34%), Postives = 91/119 (76.47%), Query Frame = 0
Query:   26 LSGIPEKHAARRVRIYKPAKVATQQGRGSLTQMWKMSFEKLEGDDRWTNPLMGWTSTGDPLSNMGMSFPSKEAAIHYAERNGYEFVTAEPAEEKQHVKPIAPFKRSMVHHWRHSGTPVY 144
            +SG P++H +RR+RIY+PA+ ATQQGRGS TQ+WK  FE  +G  RWTNPLMGW S+GDPLS   ++F SKEAAI YAE+ G+++V  +P EE  H + IAPF RSMVHHWRH G P Y
Sbjct:   39 VSGTPDEHRSRRLRIYRPARSATQQGRGSRTQLWKAEFEVQDGFGRWTNPLMGWYSSGDPLSQTTLTFSSKEAAIQYAEKYGFQYVVYDPHEEPLHERKIAPFTRSMVHHWRHEGIPRY 157          
BLAST of Gchil7266.t1 vs. uniprot
Match: A0A7S3EMI8_9RHOD (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EMI8_9RHOD)

HSP 1 Score: 158 bits (399), Expect = 2.180e-46
Identity = 71/131 (54.20%), Postives = 94/131 (71.76%), Query Frame = 0
Query:   18 NPDHSVNVLSGIPEKHAARRVRIYKPAKVATQQGRGSLTQMWKMSFEKLEGD-DRWTNPLMGWTSTGDPLSNMGMSFPSKEAAIHYAERNGYEFVTAEPAEEKQHVKPIAPFKRSMVHHWRHSGTPVYDGD 147
            NP   + +LSG PE+H +R VRIY+PA+ A QQG+ S    W + FEK +GD DRWTNPLMGWTSTGDPL+N+ +SFP++EAA+ YA RNG+ +   +   EK++V+    F RSMVH WRH+  PVY+ D
Sbjct:   59 NPHDKIFMLSGAPEEHVSRHVRIYRPARSAMQQGKKSKNATWHLKFEKTDGDVDRWTNPLMGWTSTGDPLTNLNVSFPTQEAAVEYAVRNGFHYTIEDRLPEKENVRKFQAFGRSMVHQWRHNQIPVYEDD 189          
BLAST of Gchil7266.t1 vs. uniprot
Match: A0A5J4YTN4_PORPP (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTN4_PORPP)

HSP 1 Score: 154 bits (388), Expect = 3.000e-45
Identity = 68/140 (48.57%), Postives = 100/140 (71.43%), Query Frame = 0
Query:    6 RLAPRNTRMMSSNPDHSVNVLSGIPEKHAARRVRIYKPAKVATQQGRGSLTQMWKMSFEKLEGDDRWTNPLMGWTSTGDPLSNMGMSFPSKEAAIHYAERNGYEFVTAEPAEEKQHVKPIAPFKRSMVHHWRHSGTPVYD 145
            R+  R  R ++++ + ++  +SG+PE+H  RR+RI++PA   TQQG+G  T++W   +EKLEG DRWTNPLMGWTSTGDP+SN+ + FP KE+AI YAE+ GY++V +E  +  ++V+    + +SMVH WRH   P YD
Sbjct:   11 RVLLRAQRGVTTDENAAMGAISGVPEEHLKRRLRIFQPASATTQQGKGVRTKLWVAIYEKLEGGDRWTNPLMGWTSTGDPVSNLRLEFPDKESAIQYAEKYGYKYVVSEREQRSENVRKFGAYGKSMVHQWRHK-PPKYD 149          
BLAST of Gchil7266.t1 vs. uniprot
Match: A0A7S1TKT9_9RHOD (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKT9_9RHOD)

HSP 1 Score: 154 bits (390), Expect = 4.890e-45
Identity = 69/129 (53.49%), Postives = 93/129 (72.09%), Query Frame = 0
Query:   20 DHSVNVLSGIPEKHAARRVRIYKPAKVATQQGRGSLTQMWKMSFEKLEGDDRWTNPLMGWTSTGDPLSNMGMSFPSKEAAIHYAERNGYEFVTAEPAEEKQHVKPIAPFKRSMVHHWRHSGTPVYDGDS 148
            D  + V +G P +H  RR+RIY+PA+V+TQQG+G+ + +W+  FEK+EG DRWTNPLMGWTST DPLSN  +SF SKE AI YA R GY++   EP   K++++  + + +SMVH WRH   PV+D DS
Sbjct:   60 DTDLGVATGHPTEHLQRRLRIYRPARVSTQQGKGATSVLWRAEFEKIEGADRWTNPLMGWTSTADPLSNTSLSFASKEEAIEYATRYGYKYTVFEPEHSKENLRKFSAYGKSMVHQWRHK-IPVFDSDS 187          
BLAST of Gchil7266.t1 vs. uniprot
Match: A0A7J7IMA9_9RHOD (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMA9_9RHOD)

HSP 1 Score: 150 bits (379), Expect = 1.790e-43
Identity = 66/119 (55.46%), Postives = 86/119 (72.27%), Query Frame = 0
Query:   26 LSGIPEKHAARRVRIYKPAKVATQQGRGSLTQMWKMSFEKLEGDDRWTNPLMGWTSTGDPLSNMGMSFPSKEAAIHYAERNGYEFVTAEPAEEKQHVKPIAPFKRSMVHHWRHSGTPVY 144
            +SG P++H  RR+RI++PA+   QQGRGS TQ+WK  FE  +G  RWTNPLMGW S+GDPLS   ++F SKEAAI YAE+ G++++  +P EE  H + I PF R+MVHHWRH   P Y
Sbjct:   41 VSGTPDEHRTRRLRIFRPARSPVQQGRGSRTQLWKAEFEVQDGFGRWTNPLMGWYSSGDPLSQTTLTFSSKEAAIQYAEKYGFQYIVYDPHEEPIHERKIVPFGRAMVHHWRHEAIPQY 159          
BLAST of Gchil7266.t1 vs. uniprot
Match: A0A7S1TN47_9RHOD (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN47_9RHOD)

HSP 1 Score: 129 bits (325), Expect = 9.560e-36
Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 0
Query:   45 KVATQQGRGSLTQMWKMSFEKLEGDDRWTNPLMGWTSTGDPLSNMGMSFPSKEAAIHYAERNGYEFVTAEPAEEKQHVKPIAPFKRSMVHHWRHSGTPVYDGDS 148
            +V+TQQG+G+ + +W+  FEK+EG DRWTNPLMGWTST DPLSN  +SF SKE AI YA R GY++   EP   K++++  + + +SMVH WRH   PV+D DS
Sbjct:   42 RVSTQQGKGATSVLWRAEFEKIEGADRWTNPLMGWTSTADPLSNTSLSFASKEEAIEYATRYGYKYTVFEPEHSKENLRKFSAYGKSMVHQWRHK-IPVFDSDS 144          
BLAST of Gchil7266.t1 vs. uniprot
Match: A0A7S0G1Y0_9RHOD (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G1Y0_9RHOD)

HSP 1 Score: 119 bits (297), Expect = 2.770e-31
Identity = 54/103 (52.43%), Postives = 74/103 (71.84%), Query Frame = 0
Query:   18 NPDHSVNVLSGIPEKHAARRVRIYKPAKVATQQGRGSLTQMWKMSFEKLEGD-DRWTNPLMGWTSTGDPLSNMGMSFPSKEAAIHYAERNGYEFVTAEPAEEK 119
            NP + + +LSG P++H +R VRIY+PA+ A QQG+ S    W + F K +GD DRWTNPLMGWTSTGDPL+N+ +SF ++EAA+ YA RNG+ +   +   EK
Sbjct:   62 NPHNRIFMLSGAPDEHVSRHVRIYRPARSAMQQGKKSKNATWHLEFAKTDGDVDRWTNPLMGWTSTGDPLTNLNVSFRTQEAAVKYAIRNGFHYTIEDRLPEK 164          
The following BLAST results are available for this feature:
BLAST of Gchil7266.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXI8_9FLOR2.140e-8882.52NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
R7QMJ9_CHOCR2.260e-7676.76NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
M2Y480_GALSU1.210e-4856.35NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
M1VJG6_CYAM14.750e-4861.34NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S3EMI8_9RHOD2.180e-4654.20NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A5J4YTN4_PORPP3.000e-4548.57NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S1TKT9_9RHOD4.890e-4553.49NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7J7IMA9_9RHOD1.790e-4355.46NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S1TN47_9RHOD9.560e-3654.81NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S0G1Y0_9RHOD2.770e-3152.43NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyGENE3D3.30.160.190atu1810 like domaincoord: 33..118
e-value: 5.0E-30
score: 105.1
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPFAMPF04800ETC_C1_NDUFA4coord: 37..123
e-value: 3.7E-28
score: 97.6
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPANTHERPTHR12219NADH-UBIQUINONE OXIDOREDUCTASEcoord: 21..120
NoneNo IPR availablePANTHERPTHR12219:SF8NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIALcoord: 21..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:909383..909990 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7266.t1Gchil7266.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 909383..909990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7266.t1 ID=Gchil7266.t1|Name=Gchil7266.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=150bp
MKTVGRLAPRNTRMMSSNPDHSVNVLSGIPEKHAARRVRIYKPAKVATQQ
GRGSLTQMWKMSFEKLEGDDRWTNPLMGWTSTGDPLSNMGMSFPSKEAAI
HYAERNGYEFVTAEPAEEKQHVKPIAPFKRSMVHHWRHSGTPVYDGDSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038532NDUFS4-like_sf
IPR006885NADH_UbQ_FeS_4_mit