Gchil7174.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7174.t1
Unique NameGchil7174.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length171
Homology
BLAST of Gchil7174.t1 vs. uniprot
Match: R7Q542_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q542_CHOCR)

HSP 1 Score: 112 bits (281), Expect = 8.690e-26
Identity = 55/124 (44.35%), Postives = 77/124 (62.10%), Query Frame = 0
Query:   46 VLETGYAKAGGSRKKKTIAKDSFLDLGWVVKHTTAFKDLQKQLKEATRLAQPDPEKVLCLHTDASDKHWATCATQCDQSERSKSVEEEVHQPLAFLSRSFSQLEENWSTSERKAFAVVQAFRKL 169
            VLE  YA++G  R KK+I K +   L W   H  AF+ LQ  L+ A  L+ PDPEK +C+ TDASD +W+   TQC +++  K  +E++H+P AFL   F     NWST E++A+A+ Q F KL
Sbjct:   18 VLEQAYARSG-KRTKKSIKKVALRTLSWGRTHEEAFQLLQDSLRTAVTLSYPDPEKTMCVFTDASDLYWSGVVTQCTEAQLCKPCDEQLHEPFAFLGSEFKGSSLNWSTFEKEAYAIFQTFEKL 140          
BLAST of Gchil7174.t1 vs. uniprot
Match: A0A6G0WP62_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP62_9STRA)

HSP 1 Score: 107 bits (266), Expect = 9.690e-24
Identity = 56/138 (40.58%), Postives = 76/138 (55.07%), Query Frame = 0
Query:   32 IEPLRVNLKQDAVPVLETGYAKAGGSRKKKTIAKDSFLDLGWVVKHTTAFKDLQKQLKEATRLAQPDPEKVLCLHTDASDKHWATCATQCDQSERSKSVEEEVHQPLAFLSRSFSQLEENWSTSERKAFAVVQAFRKL 169
            +EPLR         +LE     AGGS KK  +A+     +GW   H   F D++  L     LA P PEK++CL TDAS  HW    TQ  + +    +EE+ H+PLAFLS SF+     W T E++AFAVV+A ++L
Sbjct:  586 VEPLR--------GLLEVAVRSAGGSSKKAALARVKLAAIGWSKDHAKCFDDVKDTLGRMVPLAHPTPEKIICLFTDASVSHWGAACTQIPKGDLELPLEEQRHEPLAFLSGSFTGSSCRWPTIEKEAFAVVEACKRL 715          
BLAST of Gchil7174.t1 vs. uniprot
Match: A0A6G0WPP4_9STRA (Reverse transcriptase domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPP4_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.120e-22
Identity = 50/118 (42.37%), Postives = 70/118 (59.32%), Query Frame = 0
Query:   52 AKAGGSRKKKTIAKDSFLDLGWVVKHTTAFKDLQKQLKEATRLAQPDPEKVLCLHTDASDKHWATCATQCDQSERSKSVEEEVHQPLAFLSRSFSQLEENWSTSERKAFAVVQAFRKL 169
            AKA  SRKK  +A+ S   +GW   H   F+ ++  L+    LA PDPEK++CL+TDASD  W   ATQ    +      E+ H+PLAFLS +F    E W   E++AFAVV++ ++L
Sbjct:  970 AKAAASRKKTALARVSLSSIGWCEDHAECFESVKTTLQRMVPLAHPDPEKMVCLYTDASDGFWGAIATQVPLDDLELVASEQRHEPLAFLSGAFRGASERWPIVEKEAFAVVESCKRL 1087          
BLAST of Gchil7174.t1 vs. uniprot
Match: A0A6G0WP84_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP84_9STRA)

HSP 1 Score: 101 bits (251), Expect = 9.490e-22
Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = 0
Query:   52 AKAGGSRKKKTIAKDSFLDLGWVVKHTTAFKDLQKQLKEATRLAQPDPEKVLCLHTDASDKHWATCATQCDQSERSKSVEEEVHQPLAFLSRSFSQLEENWSTSERKAFAVVQAFRKL 169
            AKA  SRKK  +A+ S   +GW   H   F+ ++  L+    LA PDP+K++CL+TDASD  W   ATQ    +      E+ H+PLAFLS +F    E W   E++AFAVV+  ++L
Sbjct:  274 AKAAASRKKTALARVSLSSIGWCEDHAECFESVKTTLQRMVPLAHPDPDKMVCLYTDASDGFWGAIATQVPLDDLELVASEQRHEPLAFLSGAFRGASERWPIVEKEAFAVVELCKRL 391          
BLAST of Gchil7174.t1 vs. uniprot
Match: A0A6A4ZAT1_9STRA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZAT1_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.380e-21
Identity = 44/118 (37.29%), Postives = 68/118 (57.63%), Query Frame = 0
Query:   52 AKAGGSRKKKTIAKDSFLDLGWVVKHTTAFKDLQKQLKEATRLAQPDPEKVLCLHTDASDKHWATCATQCDQSERSKSVEEEVHQPLAFLSRSFSQLEENWSTSERKAFAVVQAFRKL 169
            AKA G  KK  +A+     +GW  +H   F  ++  L++   L+ P  +K++CL+TDASD HW    TQ    +    VE++ H+PLAFLS  F      W T E++AFA+V++ ++L
Sbjct:  335 AKAAGGSKKTALARIKLAAIGWASEHDACFAAVKDTLRQMVPLSHPSADKIICLYTDASDTHWGAACTQIPPEDLELPVEQQRHEPLAFLSGGFGGASARWPTVEKEAFAIVESCKRL 452          
BLAST of Gchil7174.t1 vs. uniprot
Match: A0A6A4ZJ35_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZJ35_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.140e-20
Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 0
Query:   52 AKAGGSRKKKTIAKDSFLDLGWVVKHTTAFKDLQKQLKEATRLAQPDPEKVLCLHTDASDKHWATCATQCDQSERSKSVEEEVHQPLAFLSRSFSQLEENWSTSERKAFAVVQAFRKL 169
            AKA  SRKK  + + +   +GW   H T F+ ++  L+    L+ PDP+K++CL+TDAS+  W   ATQ    + +    ++ H+PLAFLS +F    E W   E++AFAVV++ ++L
Sbjct:  614 AKAADSRKKTALTRVALSSVGWAEDHLTCFERVKATLQRMVPLSHPDPDKMVCLYTDASEGFWGAVATQVPSEDLALPANDQRHEPLAFLSGAFRGSSERWPIVEKEAFAVVESCKRL 731          
BLAST of Gchil7174.t1 vs. uniprot
Match: A0A6G0WTW1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTW1_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.020e-19
Identity = 44/117 (37.61%), Postives = 72/117 (61.54%), Query Frame = 0
Query:   53 KAGGSRKKKTIAKDSFLDLGWVVKHTTAFKDLQKQLKEATRLAQPDPEKVLCLHTDASDKHWATCATQCDQSERSKSVEEEVHQPLAFLSRSFSQLEENWSTSERKAFAVVQAFRKL 169
            KA GS KKK++A+ +   +GW   H   F+D++  L    +L+ P  +  +C+ TDASDK W   ATQ    + S  +E++ H+PLAFLS +F+   + W   E++A+AVV++ ++L
Sbjct:  824 KAAGSSKKKSLARVALSLVGWSQDHAACFEDVKSALANVVQLSHPRSDMEVCVFTDASDKFWGAVATQIPSEDLSLPLEDQRHEPLAFLSGTFTGASQRWPIVEKEAYAVVESCKRL 940          
BLAST of Gchil7174.t1 vs. uniprot
Match: A0A6G0W9L2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9L2_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.930e-19
Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 0
Query:   53 KAGGSRKKKTIAKDSFLDLGWVVKHTTAFKDLQKQLKEATRLAQPDPEKVLCLHTDASDKHWATCATQCDQSERSKSVEEEVHQPLAFLSRSFSQLEENWSTSERKAFAVVQAFRKL 169
            KA GS KKK +A+ +   +GW   H   F+D++  L     L+ P  +  LC+ TDASDK W   ATQ    + S  +E++ H+PLAFLS +F+   + W   E++A+AVV++ ++L
Sbjct:  867 KAAGSSKKKALARVALSLVGWWQDHAACFEDVKSALANVVPLSHPRSDMELCVFTDASDKFWGAVATQIPSEDLSLPLEDQRHEPLAFLSGTFTGASQRWPIVEKEAYAVVESCKRL 983          
BLAST of Gchil7174.t1 vs. uniprot
Match: A0A6A5AIE2_9STRA (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AIE2_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.740e-19
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 0
Query:   52 AKAGGSRKKKTIAKDSFLDLGWVVKHTTAFKDLQKQLKEATRLAQPDPEKVLCLHTDASDKHWATCATQCDQSERSKSVEEEVHQPLAFLSRSFSQLEENWSTSERKAFAVVQAFRKL 169
            AKA  SRKK  + + +   +GW   H   F  +++ LK    L+ PDP+K++CL+TDAS+  W   ATQ    + +    ++ H+PLAFLS SF      W   E++AFAVV++ ++L
Sbjct:  312 AKAADSRKKTALTRVALSSVGWSGDHLECFDRIKETLKRMVPLSHPDPDKMVCLYTDASEGFWGAVATQVPVEDLALPASDQRHEPLAFLSGSFRGASGRWPIVEKEAFAVVESCKRL 429          
BLAST of Gchil7174.t1 vs. uniprot
Match: W2QSL0_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QSL0_PHYPN)

HSP 1 Score: 92.8 bits (229), Expect = 8.070e-19
Identity = 49/159 (30.82%), Postives = 77/159 (48.43%), Query Frame = 0
Query:   14 IEFSDTIKLKLDDKLPADIEPLRVNLKQDAVP----VLETGYAKAGGSRKKKTIAKDSFLDLGWVVKHTTAFKDLQKQLKEATRLAQPDPEKVLCLHTDASDKHWATCATQCDQSERSKSVEEEVHQPLAFLSRSFSQLEENWSTSERKAFAVVQAFRK 168
            +E  D  +L +    P D+ P+ V LK  AVP    V         G RKK  +      ++GW  +     +  +  L+ A +LA PDP+K LC+ TDA D+HW    TQ       +   E+ +QP   L  SFS   + W+  E++A+A+++  R+
Sbjct:    1 MELIDVFRLVIGRDPPVDMPPMEVTLKPGAVPARCRVRRYSPTHRPGGRKKTKVRSVPLCNVGWSAEEVACLELCKAALQNAVQLAHPDPDKRLCVFTDARDEHWGAVITQIPPEHSVRPQNEQEYQPFMMLGGSFSGSAKRWAIVEKEAYAIIETCRR 159          
The following BLAST results are available for this feature:
BLAST of Gchil7174.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q542_CHOCR8.690e-2644.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6G0WP62_9STRA9.690e-2440.58Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0WPP4_9STRA2.120e-2242.37Reverse transcriptase domain-containing protein n=... [more]
A0A6G0WP84_9STRA9.490e-2241.53Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6A4ZAT1_9STRA4.380e-2137.29Integrase catalytic domain-containing protein (Fra... [more]
A0A6A4ZJ35_9STRA2.140e-2038.14Uncharacterized protein (Fragment) n=3 Tax=Aphanom... [more]
A0A6G0WTW1_9STRA1.020e-1937.61Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0W9L2_9STRA1.930e-1938.46Uncharacterized protein n=3 Tax=Aphanomyces euteic... [more]
A0A6A5AIE2_9STRA2.740e-1938.14RT_RNaseH domain-containing protein (Fragment) n=1... [more]
W2QSL0_PHYPN8.070e-1930.82Uncharacterized protein n=1 Tax=Phytophthora paras... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041577Reverse transcriptase/retrotransposon-derived protein, RNase H-like domainPFAMPF17919RT_RNaseH_2coord: 73..169
e-value: 2.8E-17
score: 62.6
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 73..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:421149..422432 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7174.t1Gchil7174.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 421149..422432 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7174.t1 ID=Gchil7174.t1|Name=Gchil7174.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=171bp
MSQQGLTELETLLIEFSDTIKLKLDDKLPADIEPLRVNLKQDAVPVLETG
YAKAGGSRKKKTIAKDSFLDLGWVVKHTTAFKDLQKQLKEATRLAQPDPE
KVLCLHTDASDKHWATCATQCDQSERSKSVEEEVHQPLAFLSRSFSQLEE
NWSTSERKAFAVVQAFRKLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041577RT_RNaseH_2
IPR043502DNA/RNA_pol_sf